cluster # 5943

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Anopheles gambiae
cluster # 5943 cluster # 5943 Sequences # 5 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5943#0 length = 1243 sequences # 3

consensus_5943#1 length = 677 sequences # 1
consensus_5943#2 length = 471 sequences # 1

consensusID : consensus_5943#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1243
fasta sequence

                              [CCGCAAAGAACTCTAAGAGCCCGAGAATCGCTGTTGTGGTGTGAAAGAAAAAAAGTGTTTTATTAATTAAAACCATCTTCTCCGTGTGACAGTGGGCGAGAAAAACGTGATTCATCGAGTGCGTTCGTGCTCAACCCTCCGGACAACGCATATTCCATCTGTATCCATTCCCAAACAAACATGGTTCCAGCTGTTTATCGCGACTGTGTGGCTTATCGCACAGCGTATGAATGAATAGTCAATATTTAACACTCTTCACCAGGGCAGCGTGCGTTCCACTTCGTTCCCCCTGCATTGCTGCAACAAATCGCCCAGCCGCCACCACCATCCCTTCACGCACATTTACGCGCTGCATCCGGGTTCGTGCATTTTTGCCATTTCGTTTTCCACCCAGCCCAGCTGACGTCAGTGCGTGTCACGAAGGCGACGAGAGAAGACGCGGAGTAAAACCAGCTACCAGGCCCCTGAAAGAAAAGGGTGTGTTTATTATAAGATTACATACACACGCACAACGTGAATCAACATTCCGGGCGTGAAAAGTTCCCCCCCAACGCAAATGGGACGGTACGGTCATTGTTAGTGCAACGCAGGTCGCGGGGAGGGGAAACCCAGTCGCGATAAGAAAGTAACAACCAAACAGTGCACGTACCTCCGCCACCCCAAAAGCACCTCAATCAGCACACCCCAGTTGGGTTTTTGAATCAATCCAATTAGAGCGACGCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCAAAGGGAGAAGAGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATCCCCCCGTTGCTGTTAGACTGTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTCGCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACCTATCTGTCCGGTGAAAACATGCAGGACCGGAAAAGCGACGTCTCGTACATCTGCCCGTACAGCGGGCCGGCCATCGGGACGCTTACCATCACCAACTATCGCCTGCACTTCCGCTCGCAGCCCGCGACGGATAAGGACCCGGTAATTGTGGTCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGAGAAGGTCGGCGGAGCAAGCTCGCGCGGGGAAAACTCGTACGGT]

[+] EMBL BM577101             [CCGCAAAGAACTCTAAGAGCCCGAGAATCGCTGTTGTGGTGTGAAAGAAAAAAAGTGTTTTATTAATTAAAACCATCTTCTCCGTGTGACAGTGGGCGAGAAAAACGTGATTCATCGAGTGCGTTCGTGCTCAACCCTCCGGACAACGCATATTCCATCTGTATCCATTCCCAAACAAACATGGTTCCAGCTGTTTATCGCGACTGTGTGGCTTATCGCACAGCGTATGAATGAATAGTCAATATTTAACACTCTTCACCAGGGCAGCGTGCGTTCCACTTCGTTCCCCCTGCATTGCTGCAACAAATCGCCCAGCCGCCACCACCATCCCTTCACGCACATTTACGCGCTGCATCCGGGTTCGTGCATTTTTGCCATTTCGTTTTCCACCCAGCCCAGCTGACGTCAGTGCGTGTCACGAAGGCGACGAGAGAAGACGCGGAGTAAAACCAGCTACCAGGCCCCTGAAAGAAAAGGGTGTGTTTATTATAAGATTACATACACACGCACAACGTGAATCAACATTCCGGGCGTGAAAAGTTCCCCCCCAACGCAAATGGGACGGTACGGTCATTGTTAGTGCAACGCAGGTCGCGGGGAGGGGAAACCCAGTCGCGATAAGAAAGTAACAACCAAACAGTGCACGTACCTCCGCCACCCCAAAAGCACCTCAATCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM613153             [                                                                                                                                                                                                                                                                                                                                                                                                                             ccgCACGAAGGCCACGAGAGAAGACGCGGAGTAAAACCAGCTACCAGGCCCCTGAAAGAAAAGGGTGTGTTTATTATAAGATTACATACACACGCACAACGTGAATCAACATTCCGGGCGTGAAAAGTTCCCCCCCAACGCAAATGGGACGGTACGGTCATTGTTAGTGCAACGCAGGTCGCGGGGAGGGGAAACCCAGTCGCGATAAGAAAGTAACAACCAAACAGTGCACGTACCTCCGCCACCCCAAAAGCACCTCAATCAGCACACCCCAGTTGGGTTTTTGAATCAATCCAATTAGAGCGACGCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCAAAGGGAGAAGAGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATCCCCCCGTTGCTGTTAGACTGTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTCGCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACCTATCTGTCCGGTGAAAA                                                                                                                                                                                                                   ]
[+] EMBL BM632405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccGGGAAACCCAGTCGCGATAAGAAAGTAACAACCAAACAGTGCACGTACCTCCGCCACCCCAAAAGCACCTCAATCAGCACACCCCAGTTGGGGTTTTGAATCAATCCAATTAGAGCGACGCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCAAAGGGAGAAGAGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATCCCCCCGTTGCTGTTAGACTGTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTCGCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACCTATCTGTCCGGTGAAAACATGCAGGACCGGAAAAGCGACGTCTCGTACATCTGCCCGTACAGCGGGCCGGCCATCGGGACGCTTACCATCACCAACTATCGCCTGCACTTCCGCTCGCAGCCCGCGACGGATAAGGACCCGGTAATTGTGGTCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGAGAAGGTCGGCGGAGCAAGCTCGCGCGGGGAAAACTCGTACGGT]




>consensus_5943#0
CCGCAAAGAACTCTAAGAGCCCGAGAATCGCTGTTGTGGTGTGAAAGAAAAAAAGTGTTT
TATTAATTAAAACCATCTTCTCCGTGTGACAGTGGGCGAGAAAAACGTGATTCATCGAGT
GCGTTCGTGCTCAACCCTCCGGACAACGCATATTCCATCTGTATCCATTCCCAAACAAAC
ATGGTTCCAGCTGTTTATCGCGACTGTGTGGCTTATCGCACAGCGTATGAATGAATAGTC
AATATTTAACACTCTTCACCAGGGCAGCGTGCGTTCCACTTCGTTCCCCCTGCATTGCTG
CAACAAATCGCCCAGCCGCCACCACCATCCCTTCACGCACATTTACGCGCTGCATCCGGG
TTCGTGCATTTTTGCCATTTCGTTTTCCACCCAGCCCAGCTGACGTCAGTGCGTGTCACG
AAGGCGACGAGAGAAGACGCGGAGTAAAACCAGCTACCAGGCCCCTGAAAGAAAAGGGTG
TGTTTATTATAAGATTACATACACACGCACAACGTGAATCAACATTCCGGGCGTGAAAAG
TTCCCCCCCAACGCAAATGGGACGGTACGGTCATTGTTAGTGCAACGCAGGTCGCGGGGA
GGGGAAACCCAGTCGCGATAAGAAAGTAACAACCAAACAGTGCACGTACCTCCGCCACCC
CAAAAGCACCTCAATCAGCACACCCCAGTTGGGTTTTTGAATCAATCCAATTAGAGCGAC
GCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCAAAGGGAGAAGAGATAGGTG
CCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATCCCCCCGTTGCTGTTAGACT
GTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACA
CCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTC
GCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACCTATCT
GTCCGGTGAAAACATGCAGGACCGGAAAAGCGACGTCTCGTACATCTGCCCGTACAGCGG
GCCGGCCATCGGGACGCTTACCATCACCAACTATCGCCTGCACTTCCGCTCGCAGCCCGC
GACGGATAAGGACCCGGTAATTGTGGTCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGA
GAAGGTCGGCGGAGCAAGCTCGCGCGGGGAAAACTCGTACGGT

consensusID : consensus_5943#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 677
fasta sequence

                              [CCGCGGACGCGTGGGCGACGCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCAAAGGGAGAAGAGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATCCCCCCGTTGCTGTTAGACTGTGGAATTGTTTCAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTCGCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACCTATCTGTCCGGTGAAAACATGCAGGATCGGAAAAGTGACGTCTCGTACATCTGCCCGTACAGCGGGCCGGCCATCGGGACGCTTACCATCACCAACTATCGCCTGCACTTCCGCTCGCAGCCCGCCACGGACAAGGACCCGGTAATTGTGGTCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGAGAAGGTCGGCGGAGCAAGCTCGCGCGGTGAAAACTCGTACGGTATCGATATTTTCTGCAAGGACATGCGCAACCTACGGTTCGCGCACAAGCAGGAAAACCACTCCCGCCGGACGGTGTTCGAGAAGCTGCAGCTGTACGCCTTTCCGCGCGCCAACGAGGGCCAGCTGTTTGCGTTC]

[+] EMBL BM595705             [CCGCGGACGCGTGGGCGACGCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCAAAGGGAGAAGAGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATCCCCCCGTTGCTGTTAGACTGTGGAATTGTTTCAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTCGCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACCTATCTGTCCGGTGAAAACATGCAGGATCGGAAAAGTGACGTCTCGTACATCTGCCCGTACAGCGGGCCGGCCATCGGGACGCTTACCATCACCAACTATCGCCTGCACTTCCGCTCGCAGCCCGCCACGGACAAGGACCCGGTAATTGTGGTCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGAGAAGGTCGGCGGAGCAAGCTCGCGCGGTGAAAACTCGTACGGTATCGATATTTTCTGCAAGGACATGCGCAACCTACGGTTCGCGCACAAGCAGGAAAACCACTCCCGCCGGACGGTGTTCGAGAAGCTGCAGCTGTACGCCTTTCCGCGCGCCAACGAGGGCCAGCTGTTTGCGTTC]




>consensus_5943#1
CCGCGGACGCGTGGGCGACGCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCA
AAGGGAGAAGAGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATC
CCCCCGTTGCTGTTAGACTGTGGAATTGTTTCAACGCTACCGTTGATAATCAAACCAAAT
ACACAGACACCATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATT
CCGATTCCAAGTCCAGCTCGCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACG
AAAATGGCTTCACCTATCTGTCCGGTGAAAACATGCAGGATCGGAAAAGTGACGTCTCGT
ACATCTGCCCGTACAGCGGGCCGGCCATCGGGACGCTTACCATCACCAACTATCGCCTGC
ACTTCCGCTCGCAGCCCGCCACGGACAAGGACCCGGTAATTGTGGTCGACTGTCCGCTGG
GCGCCGTTAGCCGCATCGAGAAGGTCGGCGGAGCAAGCTCGCGCGGTGAAAACTCGTACG
GTATCGATATTTTCTGCAAGGACATGCGCAACCTACGGTTCGCGCACAAGCAGGAAAACC
ACTCCCGCCGGACGGTGTTCGAGAAGCTGCAGCTGTACGCCTTTCCGCGCGCCAACGAGG
GCCAGCTGTTTGCGTTC

consensusID : consensus_5943#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 471
fasta sequence

                              [AGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCNGGGAGNATAAAAATCCCCCCGTTGCTGTTAGACTGTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTCGCTCAACTCAAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACNTATCTGTCCGGGGAAAACATGCAGGATCGTAAAAGTGACGTCTCGTACATCTGCCCGTACAGNGGGCCGGCCATCGGGACGCTGACCATCACCAACTATCGCCTGCACTTCCGTTCGCAGCCCGCCACGGACAAGGACCCGGTAATTGTGGNCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGAGAAGGTCGGCGAACTGCTGGCACTGCANGCGGAGCTAATGAA]

[+] EMBL BX620309             [AGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCNGGGAGNATAAAAATCCCCCCGTTGCTGTTAGACTGTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTCGCTCAACTCAAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACNTATCTGTCCGGGGAAAACATGCAGGATCGTAAAAGTGACGTCTCGTACATCTGCCCGTACAGNGGGCCGGCCATCGGGACGCTGACCATCACCAACTATCGCCTGCACTTCCGTTCGCAGCCCGCCACGGACAAGGACCCGGTAATTGTGGNCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGAGAAGGTCGGCGAACTGCTGGCACTGCANGCGGAGCTAATGAA]




>consensus_5943#2
AGATAGGTGCCAGTGGGTGTGAAACTGGACGTTCNGGGAGNATAAAAATCCCCCCGTTGC
TGTTAGACTGTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACAC
CATGGAACACCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAA
GTCCAGCTCGCTCAACTCAAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTT
CACNTATCTGTCCGGGGAAAACATGCAGGATCGTAAAAGTGACGTCTCGTACATCTGCCC
GTACAGNGGGCCGGCCATCGGGACGCTGACCATCACCAACTATCGCCTGCACTTCCGTTC
GCAGCCCGCCACGGACAAGGACCCGGTAATTGTGGNCGACTGTCCGCTGGGCGCCGTTAG
CCGCATCGAGAAGGTCGGCGAACTGCTGGCACTGCANGCGGAGCTAATGAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      CCGCAAAGAACTCTAAGAGCCCGAGAATCGCTGTTGTGGTGTGAAAGAAAAAAAGTGTTT 60
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      TATTAATTAAAACCATCTTCTCCGTGTGACAGTGGGCGAGAAAAACGTGATTCATCGAGT 120
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      GCGTTCGTGCTCAACCCTCCGGACAACGCATATTCCATCTGTATCCATTCCCAAACAAAC 180
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      ATGGTTCCAGCTGTTTATCGCGACTGTGTGGCTTATCGCACAGCGTATGAATGAATAGTC 240
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      AATATTTAACACTCTTCACCAGGGCAGCGTGCGTTCCACTTCGTTCCCCCTGCATTGCTG 300
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      CAACAAATCGCCCAGCCGCCACCACCATCCCTTCACGCACATTTACGCGCTGCATCCGGG 360
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      TTCGTGCATTTTTGCCATTTCGTTTTCCACCCAGCCCAGCTGACGTCAGTGCGTGTCACG 420
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      AAGGCGACGAGAGAAGACGCGGAGTAAAACCAGCTACCAGGCCCCTGAAAGAAAAGGGTG 480
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      TGTTTATTATAAGATTACATACACACGCACAACGTGAATCAACATTCCGGGCGTGAAAAG 540
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      TTCCCCCCCAACGCAAATGGGACGGTACGGTCATTGTTAGTGCAACGCAGGTCGCGGGGA 600
                                                                                  

consensus_5943#1      ------------------------------------------------------------
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      GGGGAAACCCAGTCGCGATAAGAAAGTAACAACCAAACAGTGCACGTACCTCCGCCACCC 660
                                                                                  

consensus_5943#1      -----------------------------------------CCGCGGACGCGTGGGCGAC 19
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      CAAAAGCACCTCAATCAGCACACCCCAGTTGGGTTTTTGAATCAATCCAATTAGAGCGAC 720
                                                                                  

consensus_5943#1      GCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCAAAGGGAGAAGAGATAGGTG 79
consensus_5943#2      ---------------------------------------------------AGATAGGTG 9
consensus_5943#0      GCAAAGCGCGGTCGCTTTTTTAGACGGTGTGAAGTGACTCAAAGGGAGAAGAGATAGGTG 780
                                                                         *********

consensus_5943#1      CCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATCCCCCCGTTGCTGTTAGACT 139
consensus_5943#2      CCAGTGGGTGTGAAACTGGACGTTCNGGGAGNATAAAAATCCCCCCGTTGCTGTTAGACT 69
consensus_5943#0      CCAGTGGGTGTGAAACTGGACGTTCCGGGAGTATAAAAATCCCCCCGTTGCTGTTAGACT 840
                      ************************* ***** ****************************

consensus_5943#1      GTGGAATTGTTTCAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACA 199
consensus_5943#2      GTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACA 129
consensus_5943#0      GTGGAATTGTTTAAACGCTACCGTTGATAATCAAACCAAATACACAGACACCATGGAACA 900
                      ************ ***********************************************

consensus_5943#1      CCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTC 259
consensus_5943#2      CCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTC 189
consensus_5943#0      CCACGGGACAGACTTTCATCGGAGCTCGAACTCGCTCGATTCCGATTCCAAGTCCAGCTC 960
                      ************************************************************

consensus_5943#1      GCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACCTATCT 319
consensus_5943#2      GCTCAACTCAAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACNTATCT 249
consensus_5943#0      GCTCAACTCCAAGCACGGCATGGACACGATCGTGGCGAACGAAAATGGCTTCACCTATCT 1020
                      ********* ******************************************** *****

consensus_5943#1      GTCCGGTGAAAACATGCAGGATCGGAAAAGTGACGTCTCGTACATCTGCCCGTACAGCGG 379
consensus_5943#2      GTCCGGGGAAAACATGCAGGATCGTAAAAGTGACGTCTCGTACATCTGCCCGTACAGNGG 309
consensus_5943#0      GTCCGGTGAAAACATGCAGGACCGGAAAAGCGACGTCTCGTACATCTGCCCGTACAGCGG 1080
                      ****** ************** ** ***** ************************** **

consensus_5943#1      GCCGGCCATCGGGACGCTTACCATCACCAACTATCGCCTGCACTTCCGCTCGCAGCCCGC 439
consensus_5943#2      GCCGGCCATCGGGACGCTGACCATCACCAACTATCGCCTGCACTTCCGTTCGCAGCCCGC 369
consensus_5943#0      GCCGGCCATCGGGACGCTTACCATCACCAACTATCGCCTGCACTTCCGCTCGCAGCCCGC 1140
                      ****************** ***************************** ***********

consensus_5943#1      CACGGACAAGGACCCGGTAATTGTGGTCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGA 499
consensus_5943#2      CACGGACAAGGACCCGGTAATTGTGGNCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGA 429
consensus_5943#0      GACGGATAAGGACCCGGTAATTGTGGTCGACTGTCCGCTGGGCGCCGTTAGCCGCATCGA 1200
                       ***** ******************* *********************************

consensus_5943#1      GAAGGTCGGCGGAGCAAGCTCGCGCGGTGAAAACTCGTACGGTATCGATATTTTCTGCAA 559
consensus_5943#2      GAAGGTCGGCGAACT--GCTGGCACTGCANGCGGAGCTAATGAA---------------- 471
consensus_5943#0      GAAGGTCGGCGGAGCAAGCTCGCGCGGGGAAAACTCGTACGGT----------------- 1243
                      *********** *    *** ** * *          **  *                  

consensus_5943#1      GGACATGCGCAACCTACGGTTCGCGCACAAGCAGGAAAACCACTCCCGCCGGACGGTGTT 619
consensus_5943#2      ------------------------------------------------------------
consensus_5943#0      ------------------------------------------------------------
                                                                                  

consensus_5943#1      CGAGAAGCTGCAGCTGTACGCCTTTCCGCGCGCCAACGAGGGCCAGCTGTTTGCGTTC 677
consensus_5943#2      ----------------------------------------------------------
consensus_5943#0      ----------------------------------------------------------