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Anopheles gambiae
cluster # 6005 cluster # 6005       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6005#0 length = 1339 sequences # 5  

consensusID : consensus_6005#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1339
fasta sequence
                              [CCACACATCACTACTAGAACAGTTTACGCGAAGATTCGACGGCGCAAAACGGCCTGCGGGCGAATCATTCGGCTTCATCTTTCCTGCTTATCGGTGTGTGTATGGGGGGAGCGGGCTAGCGAACGAACGAAGAAGAAGCGACCCACAAACAGGGGGTGACTGATGCACCTCGCAATCCGACGACTGAAAGGGAAATGTGCATCCTAACGTGGTGGAGGAACCTAACTCTATATTCACTGTCAATTGTGTGTGTGTGTGTGTAGCTTTGATGCGTGCGCGTGGTCGTGGAGGACTCTGTAGACGTATCCTCCTTCCTCCCTAGCTGCAACTGTAACTTTCTTTCTAAACGATATTACTGGTTCAGGCGCGCGTGTGTGTATGTATGTCTACTGTAGGTGACCTTCCTTTTTGCGTTGATATAGCTAGCAAACCCCGTTTCCTCTTTGGCTTGCTATTTCTACCTAGAACCTTTCTCGCTCTCCTC--AGCAGTGTGAAT---GTTTTCCTTCTGCTCTCTCCGCGTAGCGTTAGTGTGGTGTTATTAGAGGTGGCTTCTGGAGTTCTGCTGGTAGACGCGTGAGTGATCGTTAGTAGCACAATGTATACATCCGGTACATCTTTTCAAACACTCCTGTCCACGTGTGTGTGTGTTTTAGGGCGCCCGAAATAGCTGTCTTGCTGTCGATGGTTCAGAAATGTTCAAACTAGTGGATTTATTTTCTCCGTTTTTTCGGTTTTATTTCCTCCAGTAGCATAATACATTTTAAAACACAACCAAAATCACGTTCACGTTCTGCTCGTGCGTATGTGTCAAAAGGACATGTGCGCTTTTTTTCCTTTTTCCCTGTAAATGTATCCTACATACTCATCCACGCACACGCACATACACACTCCCCTTGGTATATGGAGCCCCAAACCGGGAACACCGATCGTATCCTTTGGAATGAGTGTCTGTGCGTGTATGTGAGTGTTTCTGTTGCGAGTGTCATTAGTTTTTATTATCATTATTATA-CCTTCACCCTTCCCCGCGCTACGTATGCATCAACCCCCCCCCCCCCCCCCTACCCATTGTGCTCTGTGCTGTATTGGCGGGGGATTCGATCCCCCCATCATTGCCAAACCATTAAAACCAATCGCTCTGCTACTCCCATACCCGAAATGGCAAGCATAATACATATTTCAAACGTAATAAAACAAACAAACGGAAGCAAAACGTACATTATTAATCACACATTACCCCCATTTAAACGAAGAAATCAAAGAAAAAACCGCTGTAAAACATAATCCATCATATCCCATTGGTGAAAGGAAAAGGAAGACGAGGAAAAAGAGAGAGAGAGAG]

[+] EMBL BX623768             [CCACACATCACTACTAGAACAGTTTACGCGAAGATTCGACGGCGCAAAACGGCCTGCGGGCGAATCATTCGGCTTCATCTTTCCTGCTTATCGGTGTGTGTATGGGGGGAGCGGGCTAGCGAACGAACGAAGAAGAAGCGACCCACAAACAGGGGGTGACTGATGCACCTCGCAATCCGACGACTGAAAGGGAAATGTGCATCCTAACGTGGTGGAGGAACCTAACTCTATATTCACTGTCAATTGTGTGTGTGTGTGTGTAGCTTTGATGCGTGCGCGTGGTCGTGGAGGACTCTGTAGACGTATCCTCCTTCCTCCCTAGCTGCAACTGTAACTTTCTTTCTAAACGATATTACTGGTTCAGGCGCGCGTGTGTGTATGTATGTCTACTGTAGGTGACCTTCCTTTTTGCGTTGATATAGCTAGCAAACCCCGTTTCCTCTTTGGCTTGCTATTTCTACCTAGAACCTTTCTCGCTCTCCTC  AGCAGTGTGAAT   GTTTTCCTTCTGCTCTCTCCGCGTAGCGTTAGTGTGGTGTTATTAGAGGTGGCTTCTGGAGTTCTGCTGGTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX620549             [                                                                                                                                                                                                                                                                                                                                                                                                                                             ACCCCGTTTCCATTTTGGCTTGCTATTTCTACCTAGAACCTTTCTCGCTCTCCTCAGAGCAGTGTGAATGCAGTTTTCCTTCTGCTCTCTCCGCGTAGCATTAGTGTGGTGTTATTAGTGGCGGCTTCTGGAGTTCTGCTGGTAGACGCGTGAGTGATCGTTAGTAGCACAATGTATACATCCGGTACATCTTTTCAAACACTCCTGTCCACGTGTGTGTGTGTTTTAGGGCGCCCGAAATAGCTGTCTTGCTGTCGATGGTTCAGAAATGTTCAAACTAGTGGATTTATTTTCTCCGTTTTTTCGGTTTTATTTCCTCCAGTAGCATAATACATTTTAAAACACAACCAAAATCACGTTCACGTTCTGCTCGTGCGTATGTGTCAAAAGGACATGTGCGCTTTTTTTCCTTTTTCCCTGTAAATGTATCCTACATACTCATCCACGCACACGCACATACACACTCCCCTTGGTATATGGAGCCCCAAACCGGGAACACCGATCGTATCCTTTGGAATGAGTGTCTGTGCGTGTATGTGAGTGTTTCTGTTGCGAGTGTCATTAGTTTTTATTATCA TATTATACCCTTCACCCTTCCCCGCGCTACGTATGC                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX614293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACACTCCTGTCCACGTGTGTGTGTGTTTTAGGGCGCCCGAAATAGCTGTCTTGCTGTCGATGGTTCAGAAATGTTCAAACTAGTGGATTTATTTTCTCCGTTTTTTCGGTTTTATTTCCTCCAGTAGCATAATACATTTTAAAACACAACCAAAATCACGTTCACGTTCTGCTCGTGCGTATGTGTCAAAAGGACATGTGCGCTTTTTTTCCTTTTTCCCTGTAAATGTATCCTACATACTCATCCACGCACACGCACATACACACTCCCCTTGGTATATGGAGCCCCAAACCGGGAACACCGATCGTATCCTTTGGAATGAGTGTCTGTGCGTGTATGTGAGTGTTTCTGTTGCGAGTGTCATTAGTTTTTATTATCATTATTATA CCTTCACCCTTCCCCGCGCTACGTATGCATCAA                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX614677             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGTCGATGGTTCAGAAATGTTCAAACTAGTGGATTTATTTTCTCCGTTTTTTCGGTTTTATTTCCTCCAGTAGCATAATACATTTTAAAACACAACCAAAATCACGTTCACGTTCTGCTCGTGCGTATGTGTCAAAAGGACATGTGCGCTTTTTTTCCTTTTTCCCTGTAAATGTATCCTACATACTCATCCACGCACACGCACATACACACTCCCCTTGGTATATGGAGCCCCAAACCGGGAACACCGATCGTATCCTTTGGAATGAGTGTCTGTGCGTGTATGTGAGTGTTTCTGTTGCGAGTGTCATTAGTTTTTATTATCATTGTTATA CCTTCACCCTTCCCCGCGCTACG                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX615377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TACTCATCCACGCACACGCACATACACACTCCCCTTGGTATATGGAGCCCCAAACCGGGAACACCGATCGTATCCTTTGGAATGAGTGTCTGTGCGTGTATGTGAGTGTTTCTGTTGCGAGTGTCATTAGTTTTTATTATCATTATTATA CCTTCACCCTTCCCCGCGCTACGTATGCATCAACCCCCCCCCCCCCCCCCTACCCATTGTGCTCTGTGCTGTATTGGCGGGGGATTCGATCCCCCCATCATTGCCAAACCATTAAAACCAATCGCTCTGCTACTCCCATACCCGAAATGGCAAGCATAATACATATTTCAAACGTAATAAAACAAACAAACGGAAGCAAAACGTACATTATTAATCACACATTACCCCCATTTAAACGAAGAAATCAAAGAAAAAACCGCTGTAAAACATAATCCATCATATCCCATTGGTGAAAGGAAAAGGAAGACGAGGAAAAAGAGAGAGAGAGAG]


>consensus_6005#0 CCACACATCACTACTAGAACAGTTTACGCGAAGATTCGACGGCGCAAAACGGCCTGCGGG CGAATCATTCGGCTTCATCTTTCCTGCTTATCGGTGTGTGTATGGGGGGAGCGGGCTAGC GAACGAACGAAGAAGAAGCGACCCACAAACAGGGGGTGACTGATGCACCTCGCAATCCGA CGACTGAAAGGGAAATGTGCATCCTAACGTGGTGGAGGAACCTAACTCTATATTCACTGT CAATTGTGTGTGTGTGTGTGTAGCTTTGATGCGTGCGCGTGGTCGTGGAGGACTCTGTAG ACGTATCCTCCTTCCTCCCTAGCTGCAACTGTAACTTTCTTTCTAAACGATATTACTGGT TCAGGCGCGCGTGTGTGTATGTATGTCTACTGTAGGTGACCTTCCTTTTTGCGTTGATAT AGCTAGCAAACCCCGTTTCCTCTTTGGCTTGCTATTTCTACCTAGAACCTTTCTCGCTCT CCTCAGCAGTGTGAATGTTTTCCTTCTGCTCTCTCCGCGTAGCGTTAGTGTGGTGTTATT AGAGGTGGCTTCTGGAGTTCTGCTGGTAGACGCGTGAGTGATCGTTAGTAGCACAATGTA TACATCCGGTACATCTTTTCAAACACTCCTGTCCACGTGTGTGTGTGTTTTAGGGCGCCC GAAATAGCTGTCTTGCTGTCGATGGTTCAGAAATGTTCAAACTAGTGGATTTATTTTCTC CGTTTTTTCGGTTTTATTTCCTCCAGTAGCATAATACATTTTAAAACACAACCAAAATCA CGTTCACGTTCTGCTCGTGCGTATGTGTCAAAAGGACATGTGCGCTTTTTTTCCTTTTTC CCTGTAAATGTATCCTACATACTCATCCACGCACACGCACATACACACTCCCCTTGGTAT ATGGAGCCCCAAACCGGGAACACCGATCGTATCCTTTGGAATGAGTGTCTGTGCGTGTAT GTGAGTGTTTCTGTTGCGAGTGTCATTAGTTTTTATTATCATTATTATACCTTCACCCTT CCCCGCGCTACGTATGCATCAACCCCCCCCCCCCCCCCCTACCCATTGTGCTCTGTGCTG TATTGGCGGGGGATTCGATCCCCCCATCATTGCCAAACCATTAAAACCAATCGCTCTGCT ACTCCCATACCCGAAATGGCAAGCATAATACATATTTCAAACGTAATAAAACAAACAAAC GGAAGCAAAACGTACATTATTAATCACACATTACCCCCATTTAAACGAAGAAATCAAAGA AAAAACCGCTGTAAAACATAATCCATCATATCCCATTGGTGAAAGGAAAAGGAAGACGAG GAAAAAGAGAGAGAGAGAG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)