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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6010#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1667 fasta sequence
[CCGCGGACGCGTGGGCCGGCTCGGCCGCACCCGGCGCAGAGCGCCGGAGCTCCAGTGGGCAGTAGGTTAAGGAGAGGCAGCCTACTCGACGGGTGATGTGATGTGGTGTGTGCGAGAGCGGCTGTCGCCTGAAGGGAGCGAGTTGTGCGCTTTAATGGCATGAGATCCCTTGGACCGCGGAAGCATTAAGCATTAATTAATTAAACCTCGCGCTTAATTAATGAAGCGTCTTACAATGCGGACGATACGTTCCTGCAAATTGCAATAATTCAACATCGAGTGTGTACAATCGAGTAGTTTGGGGCAGCGAAACGCTACAGCCTCTTGAGTGTCCTTTAAAATTGGAATGCTTCGGAAAGTATCATTCGCTTGCACTCCATCCCATTCAACAGTCTTCTGTCCAGCTGTCGCTGTCAACCAGAGGGAGGTGAAAATTGTGCTCTAATCATCGCAAAAGCAGAACCTCCTAAAAAA-------AGACACACACGCAAGCGGAAAAGATAAAAGGCTTCGGGCAATGGCAACCGACGGGACAGCTG-GAGTACTTTTGTGCTCATCCGGACCGTACACCGTCACCGGCGG---TGGT-GGT-GGT-GGT-GGTTTGAAATAAGAAGCTCAC-TTTCCTTCCAACCAATAAGGACCAAAGCAGAGACAGTCACACAAAGTACAAAGACAGCACGAATTCGACCTGACACAAGGAGGCAGCTGGCAGGACCGGGAATTGGAACGTACAATAATTGCAATTAAATGCAACGGCATCCGCTCGGCTAATCCTGTTTTCCCGAACCCGGTCCAATAGTCCGGCGCTCCCACCCGGTGCCACACCGAAGTCAGTGGCTACCAGTGTGTGTATGTGTAGGATGAAGCCCAAACAAAGCGGGCGGCCAACAGCAACCGATGTACCACGACGCAACTAGTCAACCGAGCAGCCACTGACACAGAGGCCGGCTCCTCAAGACAAGACAAATCCGGAGTCGCTTTTTAAACTTGAATTTCGTTTTAATTCCATTCACTCCTCCCGCCATGCCACGCTTCCGTGGGCAGCTAAGCATCGAGTGTCGCTTCATCTACTCCCTACCCACCGCTTCCACCGTACGACCGCAGCGCCATCTCGCGTCAAACGAGCGCAAGGCTCGCTTCGATCGGTACCAGGCGGTACTACCGCAACACACTTTCACGCCCGTCGAGCGACTACTCTTCGCGCACTCTTCCTTCCTCCTTTTTGCTGCATGATTCTCGTCCTTTTGCTGACGCCTTTCTAATTGCATGCTTTTCATACAGTTGCATTGATTTTAATTTTGAATAGATACAAACCGCACACCCGCGTTGCATCACGCGTCGTACGACGGAAAGGGTTGATGGCGCCTTAGGCACGAAATCAACTAAAACCCCGACGGCCGACATGGTGCGGGATGGTGTTTGAAAATAATTTATTTAATACTCCTTCGTTTGCATGCACTTTGTAAACAGAAAAGAAACACCAAGAGCACAACAACTAACGATACGTTGAGGACTATGGCAGTAGTTTTGATAATGAAGCTGTAGAGCGCATCAACAGATTTTTTCTTCGGGCGTTTGCTTCCGCTGATGAGGTAGAATGATCTAGGCATGGTGTTTTTTAGCTCAGTGCTCACCTTTCATACTGCTTACCACCAGTATCCCGGCTTGGGTTC]
[+] EMBL BM583677 [CCGCGGACGCGTGGGCCGGCTCGGCCGCACCCGGCGCAGAGCGCCGGAGCTCCAGTGGGCAGTAGGTTAAGGAGAGGCAGCCTACTCGACGGGTGATGTGATGTGGTGTGTGCGAGAGCGGCTGTCGCCTGAAGGGAGCGAGTTGTGCGCTTTAATGGCATGAGATCCCTTGGACCGCGGAAGCATTAAGCATTAATTAATTAAACCTCGCGCTTAATTAATGAAGCGTCTTACAATGCGGACGATACGTTCCTGCAAATTGCAATAATTCAACATCGAGTGTGTACAATCGAGTAGTTTGGGGCAGCGAAACGCTACAGCCTCTTGAGTGTCCTTTAAAATTGGAATGCTTCGGAAAGTATCATTCGCTTGCACTCCATCCCATTCAACAGTCTTCTGTCCAGCTGTCGCTGTCAACCAGAGGGAGGTGAAAATTGTGCTCTAATCATCGCAAAAGCAGAACCTCCTAAAAAA AGACACACACGCAAGCGGAAAAGATAAAAGGCTTCGGGCAATGGTAACCGACGGGACAGCTGTGAGTACTTTTGTGCTCATCCGGACCGTACACCGTCACCGGCGGTGTTGGTGGGTGGGTGGGTGGGTTTGAAATAAGAAGCTCACTTTTCCTTCCAACCAATAAGGACCAAAGCAGAGACAGTCACACAAAGTACAAAGACAGCACGAATTCGACCTGACACAAGGAGGCAGCTGGCAGGga ]
[+] EMBL BX628836 [ CGGGTGGTGTGATGTGGTGTGTGCGCGAGCGGCTGTCGCCTGAAGGGAGCGAGTTGTGCGCTTTAATGGCATGAGATCCCTTAGACCGCGGAAGCA C TAATTAATTAAACCTCGCGCTTAATTAATGAAGCGTCTTACAATGCGGACGATACGTTCCTGCAAATTGCAATAATTGAACATCAAGTGTGTAAAATCGAGTAGTTCGGGGCAGCGAAACGCTACAGCCTCTTGAGTGTCCTTTAAAATTGGAATGCTTCGGAAAGTATCATTCGCTTGCACTCCATCCCATTCAACAGTCTTCTGTCCAGCTGTCGCTGTCAACCAGAGGGGGGCGAAAATTGTGCTCTAATCATCGCAAAAGCAGAACCTCCTAAAAAAGACACACACACACACACGCAAGCGGAAAAGATAAAAGGCTTCGGGCAATGGCAACCGACGGGACAGCTG GAGTACTTTTGTGCTCATCCGGACCGTACACCGTCATCTGCGG TGGT GGT GGT GGT GGTTTGAAATAAGAAGCTCAC TTTCCTTCCAACCAATAAGGACCAAAGCAGAGACAGTCACACAAAGTACAAAGACAGCACGAATTCGACCTGACACAAGGAGGCAGCTGGCAGGACCGGGAATTGGAACGTACAATAATTGCAATTAAATGCAACGGCATCCGCTCGGCTAATCCTGTTTTCCCGAACCCGGTCCAATAGTCCGGCGCTCCCACCCGGTGCCACACCGAAGTCAGTGGCTACCAGTGTGTGT ]
[+] EMBL BX626218 [ AGATAAAAGGCTTCGGGCNATGGCAACCGACGAGACAGCTG GAGTACTTTTGTGCTCATCCGGACCGTACACCGTCACCGGCGG TGGT GGT GGT GGT GGTTTGAAATAAGAAGCTCAC TTTCCTTCCAACCAATAAGGACCAAAGCAGAGACAGTCACACAAAGTACAAAGACAGCTCGAATTCGACCTGACACAAGGAGGCAGCTGGCAGGACCGGGAATTGGAACGTACAATAATTGCAATTAAATGCAACGGCATCCGCTCGGCTAATCCTGTTTTCCCGAACCCGGTCCAATAGTCCGGCGCTCCCACCCAGTGCCACACCGAAGTCAGTGGCTACCAGTGTGTGTATGTGTAGGATGAAGCCCAAACAAAGCGGGCGGCCAACAGCAACCGATGTACCACGACGCAACTAGTCAACCGAGCAGCCACTGACACAGAGGCCGGCTCCTCAAGACAAGACAAATCCGGAGTCGCTTTTTAAACTTGAATTTCGTTTTAATTCCATTCACTCCTCCCGCCATGCCACGCTTCCGTGGGCAGCTAAGCATCGAGTGTCGCTTCATCTACTCCCTACCCACCGCTTCCACCGTACGACCGCAGCGCCATCTCGCGTCAAACGAGCGCAAGGCTCGCTTCGATCGGTACCAGGCGGTACTACCGCAACACACTTTCACGCCCGTCGAGCGACTA ]
[+] EMBL BM592747 [ ccgGCAGCGCCATCTCGCGTCAAACGAGCGCAAAGCTCGCTTCGATCGGTACCAGGCGGTACTACCGCAACACACTTTCACGCCCGTCGAGCGACTACTCTTCGCGCACTCTTCCTTCCTCCTTTTTGCTGCATGATTCTCGTCCTTTTGCTGACGCCTTTCTAATTGCATGCTTTTCATACAGTTGCATTGATTTTAATTTTGAATAGATACAAACCGCACACCCGCGTTGCATCACGCGTCGTACGACGGAAAGGGTTGATGGCGCCTTAGGCACGAAATCAACTAAAACCCCGACGGCCGACATGGTGCGGGATGGTGTTTGAAAATAATTTATTTAATACTCCTTCGTTTGCATGCACTTTGTAAACAGAAAAGAAACACCAAGAGCACAACAACTAACGATACGTTGAGGACTATGGCAGTAGTTTTGATAATGAAGCTGTAGAGCGCATCAACAGATTTTTTCTTCGGGCGTTTGCTTCCGCTGATGAGGTAGAATGATCTAGGCATGGTGTTTTTTAGCTCAGTGCTCACCTTTCATACTGCTTACCACCAGTATCCCGGCTTGGGTTC]
consensusID : consensus_6010#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[CCGCGGACGCGTGGGCGCGAAACGCGGAAGTATTAAGCACTAATTAATTAAACCTCGCGCTTAATTAATGAAGCGTCTTACAATGCGGACGATACGTTCCTGCAAATTGCAATAATTGAACATCGAGTGTGTACAATCGAGTAGTTCGTGGCAGCGAAACACTACAGCCTCTTGAGTGTCCTTTAAAATTGGAATGCTTCGGAAAGTATCATGCGTTTGCACTCCATCCCATTCAACAGTCTTCTGTCCAGCTGTCGCTGTCAACCAGAGGGGGGCGAAAATTGTGCTCTAATCATCGCAAAAGCAGAACCTCCTAAAAAAGACACACACACACGCAAGCGGAAAAGATAAAAGGCTTCGGGCAATGGCAACCGACGAGACAGCTGGAGTACTTTTGTGCTCATCCGGACCGTACACCGTCACCGGCGGTGGTGGTGGGTGGTGGTTTGAAATAAGAAGCTCACTTTCCTTCCAACCAATAAGGACCAAAGCAGAGACAGTCACACAAAGTACAAAGACAGCTCGAATTCGACCTGACACAAGGAGGCAGCTGGCAGGACCGGGAATTGGAACGTACAATAATTGCAATTAAATG]
[+] EMBL BM611461 [CCGCGGACGCGTGGGCGCGAAACGCGGAAGTATTAAGCACTAATTAATTAAACCTCGCGCTTAATTAATGAAGCGTCTTACAATGCGGACGATACGTTCCTGCAAATTGCAATAATTGAACATCGAGTGTGTACAATCGAGTAGTTCGTGGCAGCGAAACACTACAGCCTCTTGAGTGTCCTTTAAAATTGGAATGCTTCGGAAAGTATCATGCGTTTGCACTCCATCCCATTCAACAGTCTTCTGTCCAGCTGTCGCTGTCAACCAGAGGGGGGCGAAAATTGTGCTCTAATCATCGCAAAAGCAGAACCTCCTAAAAAAGACACACACACACGCAAGCGGAAAAGATAAAAGGCTTCGGGCAATGGCAACCGACGAGACAGCTGGAGTACTTTTGTGCTCATCCGGACCGTACACCGTCACCGGCGGTGGTGGTGGGTGGTGGTTTGAAATAAGAAGCTCACTTTCCTTCCAACCAATAAGGACCAAAGCAGAGACAGTCACACAAAGTACAAAGACAGCTCGAATTCGACCTGACACAAGGAGGCAGCTGGCAGGACCGGGAATTGGAACGTACAATAATTGCAATTAAATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6010#0 CCGCGGACGCGTGGGCCGGCTCGGCCGCACCCGGCGCAGAGCGCCGGAGCTCCAGTGGGC 60
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 AGTAGGTTAAGGAGAGGCAGCCTACTCGACGGGTGATGTGATGTGGTGTGTGCGAGAGCG 120
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 GCTGTCGCCTGAAGGGAGCGAGTTGTGCGCTTTAATGGCATGAGATCCCTTGGACCGCGG 180
consensus_6010#1 -----------------------------CCGCGGACGCGTGGG----CGCGAAACGCGG 27
* ** ** * * * * *****
consensus_6010#0 AAGCATTAAGCATTAATTAATTAAACCTCGCGCTTAATTAATGAAGCGTCTTACAATGCG 240
consensus_6010#1 AAGTATTAAGCACTAATTAATTAAACCTCGCGCTTAATTAATGAAGCGTCTTACAATGCG 87
*** ******** ***********************************************
consensus_6010#0 GACGATACGTTCCTGCAAATTGCAATAATTCAACATCGAGTGTGTACAATCGAGTAGTTT 300
consensus_6010#1 GACGATACGTTCCTGCAAATTGCAATAATTGAACATCGAGTGTGTACAATCGAGTAGTTC 147
****************************** ****************************
consensus_6010#0 GGGGCAGCGAAACGCTACAGCCTCTTGAGTGTCCTTTAAAATTGGAATGCTTCGGAAAGT 360
consensus_6010#1 GTGGCAGCGAAACACTACAGCCTCTTGAGTGTCCTTTAAAATTGGAATGCTTCGGAAAGT 207
* *********** **********************************************
consensus_6010#0 ATCATTCGCTTGCACTCCATCCCATTCAACAGTCTTCTGTCCAGCTGTCGCTGTCAACCA 420
consensus_6010#1 ATCATGCGTTTGCACTCCATCCCATTCAACAGTCTTCTGTCCAGCTGTCGCTGTCAACCA 267
***** ** ***************************************************
consensus_6010#0 GAGGGAGGTGAAAATTGTGCTCTAATCATCGCAAAAGCAGAACCTCCTAAAAAAAG---A 477
consensus_6010#1 GAGGGGGGCGAAAATTGTGCTCTAATCATCGCAAAAGCAGAACCTCCTAAAAAAGACACA 327
***** ** ********************************************* *
consensus_6010#0 CACACACGCAAGCGGAAAAGATAAAAGGCTTCGGGCAATGGCAACCGACGGGACAGCTGG 537
consensus_6010#1 CACACACGCAAGCGGAAAAGATAAAAGGCTTCGGGCAATGGCAACCGACGAGACAGCTGG 387
************************************************** *********
consensus_6010#0 AGTACTTTTGTGCTCATCCGGACCGTACACCGTCACCGGCGGTGGTGGTGG-TGGTGGTT 596
consensus_6010#1 AGTACTTTTGTGCTCATCCGGACCGTACACCGTCACCGGCGGTGGTGGTGGGTGGTGGTT 447
*************************************************** ********
consensus_6010#0 TGAAATAAGAAGCTCACTTTCCTTCCAACCAATAAGGACCAAAGCAGAGACAGTCACACA 656
consensus_6010#1 TGAAATAAGAAGCTCACTTTCCTTCCAACCAATAAGGACCAAAGCAGAGACAGTCACACA 507
************************************************************
consensus_6010#0 AAGTACAAAGACAGCACGAATTCGACCTGACACAAGGAGGCAGCTGGCAGGACCGGGAAT 716
consensus_6010#1 AAGTACAAAGACAGCTCGAATTCGACCTGACACAAGGAGGCAGCTGGCAGGACCGGGAAT 567
*************** ********************************************
consensus_6010#0 TGGAACGTACAATAATTGCAATTAAATGCAACGGCATCCGCTCGGCTAATCCTGTTTTCC 776
consensus_6010#1 TGGAACGTACAATAATTGCAATTAAATG-------------------------------- 595
****************************
consensus_6010#0 CGAACCCGGTCCAATAGTCCGGCGCTCCCACCCGGTGCCACACCGAAGTCAGTGGCTACC 836
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 AGTGTGTGTATGTGTAGGATGAAGCCCAAACAAAGCGGGCGGCCAACAGCAACCGATGTA 896
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 CCACGACGCAACTAGTCAACCGAGCAGCCACTGACACAGAGGCCGGCTCCTCAAGACAAG 956
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 ACAAATCCGGAGTCGCTTTTTAAACTTGAATTTCGTTTTAATTCCATTCACTCCTCCCGC 1016
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 CATGCCACGCTTCCGTGGGCAGCTAAGCATCGAGTGTCGCTTCATCTACTCCCTACCCAC 1076
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 CGCTTCCACCGTACGACCGCAGCGCCATCTCGCGTCAAACGAGCGCAAGGCTCGCTTCGA 1136
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 TCGGTACCAGGCGGTACTACCGCAACACACTTTCACGCCCGTCGAGCGACTACTCTTCGC 1196
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 GCACTCTTCCTTCCTCCTTTTTGCTGCATGATTCTCGTCCTTTTGCTGACGCCTTTCTAA 1256
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 TTGCATGCTTTTCATACAGTTGCATTGATTTTAATTTTGAATAGATACAAACCGCACACC 1316
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 CGCGTTGCATCACGCGTCGTACGACGGAAAGGGTTGATGGCGCCTTAGGCACGAAATCAA 1376
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 CTAAAACCCCGACGGCCGACATGGTGCGGGATGGTGTTTGAAAATAATTTATTTAATACT 1436
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 CCTTCGTTTGCATGCACTTTGTAAACAGAAAAGAAACACCAAGAGCACAACAACTAACGA 1496
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 TACGTTGAGGACTATGGCAGTAGTTTTGATAATGAAGCTGTAGAGCGCATCAACAGATTT 1556
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 TTTCTTCGGGCGTTTGCTTCCGCTGATGAGGTAGAATGATCTAGGCATGGTGTTTTTTAG 1616
consensus_6010#1 ------------------------------------------------------------
consensus_6010#0 CTCAGTGCTCACCTTTCATACTGCTTACCACCAGTATCCCGGCTTGGGTTC 1667
consensus_6010#1 ---------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||