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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6024#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 959 fasta sequence
[CCGGGAAAACATTGCTCACGCAGAGCACATTCCTGCCGTTCGGGAGTTGTGAATTTTGCCGTAAAGAATTGGCCACTTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGCAACACAACCATGATAGAGAACCTCTCC-AAAAGCGTATGGTGTTTGGAATCAGCTGCCTAATACTACTAACGATAGTTGTGCTGATCATCGAATCCAAATGGATGAAGGCGGGCTCCCGTCGGCAGGAGTTTGTGATCGAGAATAATTCCACCTGCTGGCAGCGCGAAACGTACGAGGTGATCAAGGACTGCCATCCGTGCACCGCGTTCGAGATCGCGAGCAAATCCCAGGGCGTCTGCGTCCACACCCACAACAAGGAGGTGCTGAAGTGTATCGGCGGAGAAATCGTCACGCGAACTGTGATCGGGTCGCGTGGCTAGACGAGCGGCACTACTGGTCGTTTCAAATTTCGCTAACCATCATCGGCACACTTTCCGCAGCCGTTTCCTTTCTGCGGCAAAAAACACTGAACCGACGGACTATGCTAAAGATCCAGCGGGAGCTAGGTGCATAGGAGTTCGCGTACGTACCCCCGCTTCCACCAGACGACTTTGACGATGAAGCTTTACCTTAAGTACTATCGACTGCTACCCAGCACGCAGGGTGGGTGTGTGACCGGTGCGCACCTTCCGTTCGAGCTTTGGACGTTCCGCTCGAAAGCTACATCGTGCTGGTGCTGTACCGCTACCTAGAACTTAACCCCTCGGACGTTGTGGTACCTTTGTGCAATGCAAAGCGACCACCATGTTCTACGCATTGTGCTTCCTACCTCAAGTGTGGAAACGTCGGCGTTTTTCACCGACGCCGAGCCGCTCCCGGACGATCCGGCTCTATTCTGTCAGCTTCCCTCGATCGCTATCGAGCGGATCAATACGATTGTGTCCGGACTGTGTGGCGTT]
[+] EMBL BM650613 [CCGGGAAAACATTGCTCACGCAGAGCACATTCCTGCCGTTCGGGAGTTGTGAATTTTGCCGTAAAGAATTGGCCACTTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGCAACACAACCATGATAGAGAACCTCTCC AAAAGCGTATGGTGTTTGGAATCAGC ]
[+] EMBL CNS08FLY [ CGTTCGGGAGTTGTGAATTTTGCCGTAAAGAATTGGCCACCTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGCAACACAACCATGATAGAAAACCTCTCCAAAAAGCGTATGGTGTTTGGAATCAGCTGCCTAATACTACTAACGATAGTTGTGCTGATCATCGAATCCAAATGGATGAAGGCGGGCTCCCGTCGGCAGGAGTTTGTGATCGAGAATAATTCCACCTGCTGGCAGCGCGAAACGTACGAGGTGATCAAGGACTGCCATCCGTGCACCGCGTTCGAGATCGCGAGCAAATCCCAGGGCGTCTGCGTCCACACCCACAACAAGGAGGTGCTGAAGTGTATCGGCGGAGAAATCGTCACGCGAACTGTGATCGGGTCGCGTGGCTAGACGAGCGGCACTACTGGTCGTTTCAAATTTCGCTAACCATCATCGGCACACTTTCCGCAGCCGTTTCCTTTCTGCGGCAAAAAACACTGAACCGACGGACTATGCTAAAGATCCAGCGGGAGCTAGGTGCATAGGAGTTCGCGTACGTACCCCCGCTTCCACCAGACGACTTTGACGATGAAGCTTTACCTTAAGTACTATCGACTGCTACCCAGCACGCAGGGTGGGTGTGTGACCGGTGCGCACCTTCCGTTCGAGCTTTGGACGTTCCGCTCGAAAGCTACATCGTGCTGGTGCTGTACCGCTACCTAGAACTTAACCCCTCGGACGTTGTGGTACCTTTGTGCAATGCAAAGCGACCACCATGTTCTACGCATTGTGCTTCCTACCTCAAGTGTGGAAACGTCGGCGTTTTTCACCGACGCCGAGCCGCTCCCGGACGATCCGGCTCTATTCTGTCAGCTTCCCTCGATCGCTATCGAGCGGATCAATACGATTGTGTCCGGACTGTGTGGCGTT]
consensusID : consensus_6024#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 689 fasta sequence
[CCGCGCAGAGCACATTCCTGCCGTTCGGGAGTTGTGAATTTTGCCGTAAAGAATTGGCCACTTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGCAACACAACCATGATAGAGAACCTCTCCAAAAAGCGTATGGTGTTTGGAATCAGCTGCCTCATACTCACGCACGACGGCGGATCGATTCGTAACCACCAAATCCATCCTCGCGCTTTCCCTTCGTTTGCCCAACCCCAAAACCCGCTAGACTAACGATAGTTGTGCTGATCATCGAATCCAAATGGATGAAGGCGGGCTCCCGTCGGCAGGAGTTTGTGATCGAGAATAATTCCACCTGCTGGCAGCGCGAAACGTACGAGGTGATCAAGGACTGCCATCCGTGCACCGCGTTCGAGATCGCGAGCAAATCCCAGGGCGTCTGCGTCCACACCCACAACAAGGAGGTGCTGAAGTGTATCGGCGGAGAAATCGTCACGCGAAGCTGTGATCGGGTCGCGTGGCTAGACGAGCGGCACTACTGGTCGTTTCAAATTTCGCTAACCATCATCGGCACAC-TTTCCGCAGCCGTTTCCTTTCTGCGGCAAAAAACACTAAACCGACGGACTATGCTGAAGATCCAGCGGGAAGCTAGGTGCATAGGAATTCGCGTACGTACCCCCGCTTCCACCACACGACTTTGACGA]
[+] EMBL BM621479 [CCGCGCAGAGCACATTCCTGCCGTTCGGGAGTTGTGAATTTTGCCGTAAAGAATTGGCCACTTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGCAACACAACCATGATAGAGAACCTCTCCAAAAAGCGTATGGTGTTTGGAATCAGCTGCCTCATACTCACGCACGACGGCGGATCGATTCGTAACCACCAAATCCATCCTCGCGCTTTCCCTTCGTTTGCCCAACCCCAAAACCCGCTAGACTAACGATAGTTGTGCTGATCATCGAATCCAAATGGATGAAGGCGGGCTCCCGTCGGCAGGAGTTTGTGATCGAGAATAATTCCACCTGCTGGCAGCGCGAAACGTACGAGGTGATCAAGGACTGCCATCCGTGCACCGCGTTCGAGATCGCGAGCAAATCCCAGGGCGTCTGCGTCCACACCCACAACAAGGAGGTGCTGAAGTGTATCGGCGGAGAAATCGTCACGCGAAGCTGTGATCGGGTCGCGTGGCTAGACGAGCGGCACTACTGGTCGTTTCAAATTTCGCTAACCATCATCGGCACAC TTTCCGCAGCCGTTTCCTTTCTGCGGCAAAAAACACTAAACCGACGGACTATGCTGAAGATCCAGCGGGAAGCTAGGTGCATAGGAATTCGCGTACGTACCCCCGCTTCCACCACACGACTTTGACGA]
[+] EMBL BM596034 [ ccgCATTCCTGCCGTTCGGGAGTTGTGAATTTTGCCGTAAAGAATTGGCCACTTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGCAACACAACCATGATAGAGAACCTCTCCAAAAAGCGTATGGTGTTTGGAATCAGCTGCCTCATACTCACGCACGACGGCGGATCGATTCGTAACCACCAAATCCATCCTCGCGCTTTCCCTTCGTTTGCCCAACCCCAAAACCCGCTAGACTAACGATAGTTGTGCTGATCATCGAATCCAAATGGATGAAGGCGGGCTCCCGTCGGCAGGAGTTTGTGATCGAGAATAATTCCACCTGCTGGCAGCGCGAAACGTACGAGGTGATCAAGGACTGCCATCCGTGCACCGCGTTCGAGATCGCTAGCAAATCCCAGGGCGTCTGCGTCCACACCCACAACAAGGAGGTGCTGAAGTGTATCGGCGGAGAAATCGTCACGCGAAGCTGTGATCGGGTCGCGTGGCTAGACGAGCGGCACTACTGGTCGTTTCAAATTTCGCTAACCATCATCGGCACACTTTTCCGCAGCCGTTTCCTTTC ]
[+] EMBL BM612644 [ ccgTGCCGTTCGGGAGTTGTGAATTTTGCCGTAAAGAATTGGCCACTTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGCAACACAACCATGATAGAGAACCTCTCCAAAAAGCGTATGGTGTTTGGAATCAGCTGCCTCATACTCACGCACGACGGCGGATCGATTCGTAACCACCAAATCCATCCTCGCGCTTTCCCTTCGTTTGCCCAACCCCAAAACCCGCTAGACTAACGATAGTTGTGCTGATCATCGAATCCAAATGGATGAAGGCGGGCTCCCGTCGGCAGGAGTTTGTGATCGAGAATAATTCCACCTGCTGGCAGCGCGAAACGTACGAGGTGATCAAGGACTGCCATCCGTGCACCGCGTTCGAGATCGCGAGCAAATCCCAGGGCGTCTGCGTCCACACCCACAACAAGGAGGTGCTGAAGTGTATCGGCGGAGAAATCGTCACGCGAAGCTGTGATCGGGTCGCGTGGCTAGACGAGCGGCACTACTGGTCGTTTCAAATTTCGCTAACCATCATCGGCACAC TTTCCGCAGCCGTTTCCTTTCTGCGGCAAAAAACACTAAACCGACGGACTATGCTGAAGATCCAGCGGG AGCTAGGTGCATAGGAGTTCGCGTACGTACCCCCGCTTCCACCACA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6024#0 CCGGGAAAACATTGCTCACGCAGAGCACATTCCTGCCGTTCGGGAGTTGTGAATTTTGCC 60
consensus_6024#1 ---------------CCGCGCAGAGCACATTCCTGCCGTTCGGGAGTTGTGAATTTTGCC 45
* ******************************************
consensus_6024#0 GTAAAGAATTGGCCACTTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGC 120
consensus_6024#1 GTAAAGAATTGGCCACTTTGCCTATCTCTTGCCCCGTTTGTTACCCTTCCACTCATCCGC 105
************************************************************
consensus_6024#0 AACACAACCATGATAGAGAACCTCTCCAAAA-GCGTATGGTGTTTGGAATCAGCTGCCTA 179
consensus_6024#1 AACACAACCATGATAGAGAACCTCTCCAAAAAGCGTATGGTGTTTGGAATCAGCTGCCTC 165
******************************* ***************************
consensus_6024#0 ATACT------------------------------------------------------- 184
consensus_6024#1 ATACTCACGCACGACGGCGGATCGATTCGTAACCACCAAATCCATCCTCGCGCTTTCCCT 225
*****
consensus_6024#0 ----------------------------ACTAACGATAGTTGTGCTGATCATCGAATCCA 216
consensus_6024#1 TCGTTTGCCCAACCCCAAAACCCGCTAGACTAACGATAGTTGTGCTGATCATCGAATCCA 285
********************************
consensus_6024#0 AATGGATGAAGGCGGGCTCCCGTCGGCAGGAGTTTGTGATCGAGAATAATTCCACCTGCT 276
consensus_6024#1 AATGGATGAAGGCGGGCTCCCGTCGGCAGGAGTTTGTGATCGAGAATAATTCCACCTGCT 345
************************************************************
consensus_6024#0 GGCAGCGCGAAACGTACGAGGTGATCAAGGACTGCCATCCGTGCACCGCGTTCGAGATCG 336
consensus_6024#1 GGCAGCGCGAAACGTACGAGGTGATCAAGGACTGCCATCCGTGCACCGCGTTCGAGATCG 405
************************************************************
consensus_6024#0 CGAGCAAATCCCAGGGCGTCTGCGTCCACACCCACAACAAGGAGGTGCTGAAGTGTATCG 396
consensus_6024#1 CGAGCAAATCCCAGGGCGTCTGCGTCCACACCCACAACAAGGAGGTGCTGAAGTGTATCG 465
************************************************************
consensus_6024#0 GCGGAGAAATCGTCACGCGAA-CTGTGATCGGGTCGCGTGGCTAGACGAGCGGCACTACT 455
consensus_6024#1 GCGGAGAAATCGTCACGCGAAGCTGTGATCGGGTCGCGTGGCTAGACGAGCGGCACTACT 525
********************* **************************************
consensus_6024#0 GGTCGTTTCAAATTTCGCTAACCATCATCGGCACACTTTCCGCAGCCGTTTCCTTTCTGC 515
consensus_6024#1 GGTCGTTTCAAATTTCGCTAACCATCATCGGCACACTTTCCGCAGCCGTTTCCTTTCTGC 585
************************************************************
consensus_6024#0 GGCAAAAAACACTGAACCGACGGACTATGCTAAAGATCCAGCGGGA-GCTAGGTGCATAG 574
consensus_6024#1 GGCAAAAAACACTAAACCGACGGACTATGCTGAAGATCCAGCGGGAAGCTAGGTGCATAG 645
************* ***************** ************** *************
consensus_6024#0 GAGTTCGCGTACGTACCCCCGCTTCCACCAGACGACTTTGACGATGAAGCTTTACCTTAA 634
consensus_6024#1 GAATTCGCGTACGTACCCCCGCTTCCACCACACGACTTTGACGA---------------- 689
** *************************** *************
consensus_6024#0 GTACTATCGACTGCTACCCAGCACGCAGGGTGGGTGTGTGACCGGTGCGCACCTTCCGTT 694
consensus_6024#1 ------------------------------------------------------------
consensus_6024#0 CGAGCTTTGGACGTTCCGCTCGAAAGCTACATCGTGCTGGTGCTGTACCGCTACCTAGAA 754
consensus_6024#1 ------------------------------------------------------------
consensus_6024#0 CTTAACCCCTCGGACGTTGTGGTACCTTTGTGCAATGCAAAGCGACCACCATGTTCTACG 814
consensus_6024#1 ------------------------------------------------------------
consensus_6024#0 CATTGTGCTTCCTACCTCAAGTGTGGAAACGTCGGCGTTTTTCACCGACGCCGAGCCGCT 874
consensus_6024#1 ------------------------------------------------------------
consensus_6024#0 CCCGGACGATCCGGCTCTATTCTGTCAGCTTCCCTCGATCGCTATCGAGCGGATCAATAC 934
consensus_6024#1 ------------------------------------------------------------
consensus_6024#0 GATTGTGTCCGGACTGTGTGGCGTT 959
consensus_6024#1 -------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||