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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6033#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1402 fasta sequence
[CCGCGCCGTGCGTGTGCAATTGGTATTTGGCAATTGCATTGTGATTGCATTAACTTATGGTTTCGGCTCGCGTTAGCCGCGGATCGGGTGAAGGAAGGCCTTTCGGGGAACTGGATCGAAATTGCGTACGGTACGCGATCCGGCTCGGTGCGTGTCATTGTTCAGCATCCCGAAACGGTCGGGCACGGGCCTCAGCTATTTCAAACATTCACCGTACACTAAAGCCCGGTGACGAAGGTGACTCTGTCGGAGAAGTTTTTAATTTCGGTATGCAGCGAGTACAATCACGTGCGTACCTGGCAGGTGCCCCGGTTTCGAGGCATGATCTCCACTCAACCCGGCTCGACACCAGAAGCATCGTTTAAGATCGTTTCACTGGAAGCCGTTGATTCGACGTTTAGCTATTCGGCCGGGAACGATTTCGGCCCGTTCGGCGAACAGGACGACGAACAGATATTCGTGCAAAAGGTCGTCCCCGACACGGACCAACTGTACGTACGGCTGGCCTCGAATGGTGATCGCGTTTGTTTGATCAGATCCGTGGACGGTACTACAATAACATCGTTCTGCGTGCATGAATGCGAGGGATCGCGGATGGGTTCGAGACCGCGCCGGTTCATCCTATCCGGCCACTGTAACGGTGCAATACAGATGTGGGATCTCACGACTGCGCTGGAAATTTCGAAAAAGAAGGATCAACCCAAGCGCACCATCGGTGGACCGACGGCCGACGAGCTGATCCGAGAGTTGGACCAGTGCGACCTAAGCAATAGCCACTGCTCGACGCCCTGCATGTCACCCTGCCCGTCAGCATTTTCGGGCAGCATGATGGAGGCGAACACTGTCGGACGACTGAAACCGTTCAATGTGGCTTTCTTGAATCAGTCAGCTGCAGCGGCAGCCGCAGCCATGGGACTCGGTGGACCACAGGCTGTGCCGGCGCAGGGTCCGGGAGCGATGGGAGCGGCTGGTGCTGGAGCGGCTGCTGGTGCGGCTGCTGCTCCGCAACAACCGGCATTGGCTGCTCAGCAACCTAATCAACCAAACTGATCTCTATTCCGCCGGCGGAGGGACATTTGAGAGTGGTTCCTGTGTTGTTATCTCGAGGTGGAATTTTAGCCGAGGGATGGAAGGTGGCGAATGGTAAAGCCTCA--CCGTCCTTCCAGCCCAAACGCAGTGTTTAAGCTATGCAAGAAGTCCTTATAGCTAATAGGTAATTTTCTCCCATTCTCAGATCTACAAAACTCTCACGCGATAAACGTTGTGCGTTCAAGTTCATGTTCTATGAGTCAGTGGAAGGATTTTTTTTTCTCAGCACACGCTCTTGCCCAACTGGGGCACTAGCATGCTTTCCGTTGCAAATCTATTGTTTATTGTGCTGTTTAACGCATAATGTCAAATA]
[+] EMBL BM654469 [CCGCGCCGTGCGTGTGCAATTGGTATTTGGCAATTGCATTGTGATTGCATTAACTTATGGTTTCGGCTCGCGTTAGCCGCGGATCGGGTGAAGGAAGGCCTTTCGGGGAACTGGATCGAAATTGCGTACGGTACGCGATCCGGCTCGGTGCGTGTCATTGTTCAGCATCCCGAAACGGTCGGGCACGGGCCTCAGCTATTTCAAACATTCACCGTACACTAAAGCCCGGTGACGAAGGTGACTCTGTCGGAGAAGTTTTTAATTTCGGTATGCAGCGAGTACAATCACGTGCGTACCTGGCAGGTGCCCCGGTTTCGAGGCATGATCTCCACTCAACCCGGCTCGACACCAGAAGCATCGTTTAAGATCGTTTCACTGGAAGCCGTTGATTCGACGTTTAGCTATTCGGCCGGGAACGATTTCGGCCCGTTCGGCGAACAGGACGACGAACAGATATTCGTGCAAAAGGTCGTCCCCGACACGGACCAACTGTACGTACGGCTGGCCTCGAATGGTGATCGCGTTTGTTTGATCAGATCCGTGGACGGTACTACAATAACATCGTTCTGCGTGCATGAATGCGAGGGATCGCGGATGGGTTCGAGACCGCGCCGGTTCATCCTATCCGGCCACTGTAACGGT ]
[+] EMBL BX620476 [ CGACGTTTAGCTATTCGGCCGGGAACGATTTCGGCCCGTTCGGCGAACAGGACGACGAACAGATATTCGTGCAAAAGGTCGTCCCCGACACGGACCAACTGTACGTACGGCTGGCCTCGAATGGTGATCGCGTTTGTTTGATCAGATCCGTGGACGGTACCACAATAACATCGTTCTGCGTGCATGAATGCGAGGGATCGCGGATGGGTTCGAGACCGCGCCGGTTCATCCTATCCGGCCACTGTAACGGTGCAATACAGATGTGGGATCTCACGACTGCGCTGGAAATTTCGAAAAAGAAGGATCAACCCAAGCGCACCATCGGTGGACCGACGGCCGACGAGCTGATCCGAGAGTTGGACCAGTGCGACCTAAGCAATAGCCACTGCTCGACGCCCTGCATGTCACCCTGCCCGTCAGCATTTTCGGGCAGCATGATGGAGGCGAACACTGTCGGACGACTGAAACCGTTCAATGTGGCTTTCTTGAATCAGTCAGCTGCAGCGGCAGCCGCAGCCATGGGACTCGGTGGACCACAGGCTGTGCCGGCGCAGGGTCCGGGAGCGATGGGAGCGGCTGGT TGGAGCGGCTGCTGGTGCGGCTG ]
[+] EMBL BX608286 [ GCTGGAAATTCCGAAAAAGAAGGATCAACCCAAGCGCACCATCGGTGGACCGACGGCCGACGAGCTGATCCGAGAGTTGGACCAGTGCGACCTAAGCAATAGCCACTGCTCGACGCCCTGCATGTCACCCTGCCCGTCAGCATTTTCGGGCAGCATGATGGAGGCGAACACTGTCGGACGACTGAAACCGTTCAATGTGGCTTTCTTGAATCAGTCAGCTGCAGCGGCATCCGCAGCCATGGGACTCGGTGGACCACAGGCTGTGCCGGCGCAGGGTCCGGGAGCGATGGGAGCGGCTGGTGCTGGAGCGGCTGCTGGTGCGGCTGCTGCTCCGCAACAACCGGCATTGGCTGCTCAGCAACCTAATCAACCAAACTGATCTCTATTCCGCCGGCGGAGGGACATTTGAGAGTGGTTCCTGTGTTGTTATCTCGAGGTGGAATTTTAGCCGAGGGATGGAAGGTGGCGAATGGTAAAGCCTCA CCGTCCTTCCAGCCCAAACGCAGTGTTTAAGCTATGCAAGAAGTCCTTATAGCTAATAGGTAATTTTCTCCCATTCTCAGATCTACAAAACTCTCACGCGATAAACGTTGTGCGTTCAAGTTCATGTTCTATGAGTCAGTGGAAGGATTTTTTTTTCTCAGCACACGCTCTTGCCCAACTGGGGCACTAGCATGCTTTCCGTTGCA ]
[+] EMBL BX613363 [ CAACCCAAGCGCACCATCGGTGGACCGACGGCCGACGAGCTGATCCGAGAGTTGGACCAGTGCGACCTAAGCAATAGCCACTGCTCGACGCCCTGCATGTCACCCTGCCCGTCAGCATTTTCGGGCAGCATGATGGAGGCGAACACTGTCGGACGACTGAAACCGTTCAATGTGGCTTTCTTGAATCAGTCAGCTGCAGCGGCAGCCGCAGCCATGGGACTCGGTGGACCACAGGCTGTGCCGGCGCAGGGTCCGGGAGCGATGGGAGCGGCTGGTGCTGGAGCGGCTGCTGGTGCGGCTGCTGCTCCGCAACAACCGGCATTGGCTGCTCAGCAACCTAATCAACCAAACTGATCTCTATTCCGCCGGCGGAGGGACATTTGAGAGTGGTTCCTGTGTTGTTATCTCGAGGTGGAATTTTAGCCGAGGGATGGAAGGTGGCGAATGGTAAAGCCTCACCCCGTCCTTCCAGCCCAAACGCAGTGTTTAAGCTATGCAAGAAGTCCTTATAGCTAATAGATAATTTTCTCCCATTCTCAGATCTACAAAACTCTCACGCGATAAACGTTGTGCGTTCAAGTTCATGTTCTATGAGTCAGTGGAAGGA TTTTTTTTCTCAGCACACGCTCTTGCCCAACTGGGGCACTAGCATGCTTTCCGTTGCAAATCTATTGTTTATTGTGCTGTTTAACGCATAATGTCAAATA]
consensusID : consensus_6033#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 600 fasta sequence
[CCGTTATTCCGGCTGGCAGCAGATCTTCGTGTCGCCGTACATCGAAACTACGATCGAGCGGATCGCAATCAACGCGAAGATGAATCTGGCCACTTCGGCGGGCGAACAGTCGCACAGCAAGATGGTAGCAATCTCGTACGGCAGCCAAATTCGGCTGTGGGGAATCTCGGAGGACGGCAGCAAGGCCGAGGTGGGCACGTTTAATTTGCATGTGCGCGTGGAGTATTTGTTCTTCATTGGCAGCCAGCTGGTTGCGTTGTCGTCGTCCGGCAAGATCGGCGTTTGGCATGCGATGACGCAGCACTGGCAGATACAGGATCTCGTTCCGATACTTTCGTTCGATACGGCCGGTTCCTTTTTGCTGCTGGGCTGCAACAACGGTTCGATCTACTACATCGATATGCAAAAATTCCCACTGCGTATGAAGGACAACGATCTACTGGTGACAGAGCTGTACAAGGACCCTTCGAACGATCACATCACCGCCATCTCGGTGTATCTAACTCCGAAAACAACAAGCCTTTCGGGGAATTGGATCGAAATTGCGTACGGTACGCGATCCGGCTCGGTGCGTGTCATTGTTCAACATCCCGAAACGGT]
[+] EMBL BM598267 [CCGTTATTCCGGCTGGCAGCAGATCTTCGTGTCGCCGTACATCGAAACTACGATCGAGCGGATCGCAATCAACGCGAAGATGAATCTGGCCACTTCGGCGGGCGAACAGTCGCACAGCAAGATGGTAGCAATCTCGTACGGCAGCCAAATTCGGCTGTGGGGAATCTCGGAGGACGGCAGCAAGGCCGAGGTGGGCACGTTTAATTTGCATGTGCGCGTGGAGTATTTGTTCTTCATTGGCAGCCAGCTGGTTGCGTTGTCGTCGTCCGGCAAGATCGGCGTTTGGCATGCGATGACGCAGCACTGGCAGATACAGGATCTCGTTCCGATACTTTCGTTCGATACGGCCGGTTCCTTTTTGCTGCTGGGCTGCAACAACGGTTCGATCTACTACATCGATATGCAAAAATTCCCACTGCGTATGAAGGACAACGATCTACTGGTGACAGAGCTGTACAAGGACCCTTCGAACGATCACATCACCGCCATCTCGGTGTATCTAACTCCGAAAACAACAAGCCTTTCGGGGAATTGGATCGAAATTGCGTACGGTACGCGATCCGGCTCGGTGCGTGTCATTGTTCAACATCCCGAAACGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6033#0 CCGCGCCGTGCGTGTGCAATTGGTATTTGGCAATTGCATTGTGATTGCATTAACTTATGG 60
consensus_6033#1 ------------------------------CCGTTATTCCG-GCTGGCAGCAGATCTTCG 29
* ** * * * *** * * * *
consensus_6033#0 TTTCGGCTCGCGTT-AGCCGCGGATCGGGTGAAGGAAGGCCTTTCGGGGAACTGGATCGA 119
consensus_6033#1 TGTCGCCGTACATCGAAACTACGATCGAGCGGATCGCAATCAA-CGCGAAGATGAATCTG 88
* *** * * * * * ***** * * * * ** * * ** ***
consensus_6033#0 AATTGCGTACGGTACGCGATCCGGCTCGGTGCGTGTCATTGTTCAGCATCCCGAAACGGT 179
consensus_6033#1 G-CCAC-TTCGGCGGGCGAACAGTCGCACAGCAAGATGGTAG-CAATCTCGTACGGCAGC 145
* * *** **** * * * * ** * * ** ** * *
consensus_6033#0 CGGGCACGGGCCTCAGCTATTTCAAACATTCACCGTACACTAAAGCCCGGT--GACGAAG 237
consensus_6033#1 CAAATTCGGCTGTGGGGAATCTCGGAGGACGGCAGCAAGGCCGAGGTGGGCACGTTTAAT 205
* *** * * ** ** * * * * ** ** * **
consensus_6033#0 GTGACTCTGTCGGAGAAGTTTTTAATTTCGGTATGCAGCGAGTACAATCACGTGCGTACC 297
consensus_6033#1 TTGCATGTGCGCGTGGAGTATTTGTTCTTCATTGGCAGCCAGC-TGGTTGCGT-TGTCGT 263
** * ** * * *** *** * * * ***** ** * *** **
consensus_6033#0 TGGCAGGTGCCCCGGTTTCGAGGCATGATCTCCACTCAACCCGGCTCGACACCAGAAGCA 357
consensus_6033#1 CGTCCGGCAAGATCGGCGTTTGGCATGCGATG-ACGCAGCACTGGCAGATACAGGA--TC 320
* * ** * ****** * ** ** * * * ** ** **
consensus_6033#0 TCGTTTAAGATCGTTTCACTGGAAGCCGTTGATTCGACGTTTAGCTATTCGGCCGGGA-- 415
consensus_6033#1 TCGTTCC-GATACTTTCGTTCGATACGGCCGGTTC--CTTTTTGCTGCTGGGCTGCAACA 377
***** *** **** * ** * * * *** * *** *** * *** * *
consensus_6033#0 ACGATTTCGGCCCGTTCGGCGAACAGGACGACGAACAGATATTCGTGCAAAAGGTCGTCC 475
consensus_6033#1 ACGGTTCGATCTACTACATCGATATGCAAAAATTCCCACTGCGTATGAAGGACAACGATC 437
*** ** * * * *** * * * * * ** * * ** *
consensus_6033#0 CCGACACGGACCAACTGTACGTACGGCTGGCCTCGAATGGTGATCGCGTTTGTTTGATCA 535
consensus_6033#1 TACTGGTGACAGAGCTGTACA-AGGACC--CTTCGAACG---ATCACATCACCGCCATC- 490
* * ****** * * * * ***** * *** * * ***
consensus_6033#0 GATCCGTGGACGGTACTACAATAACATCGTTCTGCGTGCATGAATGCGA-GGGATCGCGG 594
consensus_6033#1 --TCGGTGTATCTAACTCCGAAAACAACAAGCCTTTCGGGGAATTGGATCGAAATTGCGT 548
** *** * *** * * **** * * * * ** * ** ***
consensus_6033#0 ATGGGTTCGAGACCGCGCCGGTTCATCCTATCCGGCCACTGTAACGGTGCAATACAGATG 654
consensus_6033#1 ACGGTACGCGATCCGGCTCGGTGCGTGTCATT-GTTCAACATCCCGAAACGGT------- 600
* ** *** **** * * ** * ** * ** * *
consensus_6033#0 TGGGATCTCACGACTGCGCTGGAAATTTCGAAAAAGAAGGATCAACCCAAGCGCACCATC 714
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 GGTGGACCGACGGCCGACGAGCTGATCCGAGAGTTGGACCAGTGCGACCTAAGCAATAGC 774
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 CACTGCTCGACGCCCTGCATGTCACCCTGCCCGTCAGCATTTTCGGGCAGCATGATGGAG 834
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 GCGAACACTGTCGGACGACTGAAACCGTTCAATGTGGCTTTCTTGAATCAGTCAGCTGCA 894
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 GCGGCAGCCGCAGCCATGGGACTCGGTGGACCACAGGCTGTGCCGGCGCAGGGTCCGGGA 954
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 GCGATGGGAGCGGCTGGTGCTGGAGCGGCTGCTGGTGCGGCTGCTGCTCCGCAACAACCG 1014
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 GCATTGGCTGCTCAGCAACCTAATCAACCAAACTGATCTCTATTCCGCCGGCGGAGGGAC 1074
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 ATTTGAGAGTGGTTCCTGTGTTGTTATCTCGAGGTGGAATTTTAGCCGAGGGATGGAAGG 1134
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 TGGCGAATGGTAAAGCCTCACCGTCCTTCCAGCCCAAACGCAGTGTTTAAGCTATGCAAG 1194
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 AAGTCCTTATAGCTAATAGGTAATTTTCTCCCATTCTCAGATCTACAAAACTCTCACGCG 1254
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 ATAAACGTTGTGCGTTCAAGTTCATGTTCTATGAGTCAGTGGAAGGATTTTTTTTTCTCA 1314
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 GCACACGCTCTTGCCCAACTGGGGCACTAGCATGCTTTCCGTTGCAAATCTATTGTTTAT 1374
consensus_6033#1 ------------------------------------------------------------
consensus_6033#0 TGTGCTGTTTAACGCATAATGTCAAATA 1402
consensus_6033#1 ----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||