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These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 605 cluster # 605       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_605#0 length = 587 sequences # 1  
consensus_605#1 length = 316 sequences # 1  

consensusID : consensus_605#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 587
fasta sequence
                              [AGAAGCAGTGCAATGTAGCCCGGAGCGCGAAGCTGNCAAGCTGCTACGCGCCACCTCCCACTCCAACTCGCGGGACAGCGTGCCTAAACCCGAGCCAGGATTACATCCAGGCCTCGTCGCAGCATACGATCCGCTACCCATCGACCTCCGTGCTGGCCTCGACACCAACGCCATCACTTCCATTGTAATGTATTTGCGTTCCAGAGCACACACACACCCACACACTCACACACAAACACACAAGTCGGTCTGTTTTTTTTTTGTTTCTGTTCAGTTTCGTTCTTACGTTTGTTTTGGATTAGTTCCTTTTGTTCTTTTCTTCTCTCTCTCCCTTCGTCTCTTCAAATCTTTCATTGAGGTTAACTGCTACTTTTAAAACATTCACTTCCCTTGTTTTGTTTGCGTTGTGTTTCTTCNTAACCGTTTTTATATGATCTTACATCGCATTAGCATCTGCAACTTATTTAGTTTGGTTGTACCGCCACTCGNACGGGCTCGCGAAGAAAGCACTTCNCGATACGATCAAAACNAAACTTCNGCGTCCATTTCCCTTGAACGCCCTGCATTTAAACACAAGGATAATGATT]

[+] EMBL BX620301             [AGAAGCAGTGCAATGTAGCCCGGAGCGCGAAGCTGNCAAGCTGCTACGCGCCACCTCCCACTCCAACTCGCGGGACAGCGTGCCTAAACCCGAGCCAGGATTACATCCAGGCCTCGTCGCAGCATACGATCCGCTACCCATCGACCTCCGTGCTGGCCTCGACACCAACGCCATCACTTCCATTGTAATGTATTTGCGTTCCAGAGCACACACACACCCACACACTCACACACAAACACACAAGTCGGTCTGTTTTTTTTTTGTTTCTGTTCAGTTTCGTTCTTACGTTTGTTTTGGATTAGTTCCTTTTGTTCTTTTCTTCTCTCTCTCCCTTCGTCTCTTCAAATCTTTCATTGAGGTTAACTGCTACTTTTAAAACATTCACTTCCCTTGTTTTGTTTGCGTTGTGTTTCTTCNTAACCGTTTTTATATGATCTTACATCGCATTAGCATCTGCAACTTATTTAGTTTGGTTGTACCGCCACTCGNACGGGCTCGCGAAGAAAGCACTTCNCGATACGATCAAAACNAAACTTCNGCGTCCATTTCCCTTGAACGCCCTGCATTTAAACACAAGGATAATGATT]


>consensus_605#0 AGAAGCAGTGCAATGTAGCCCGGAGCGCGAAGCTGNCAAGCTGCTACGCGCCACCTCCCA CTCCAACTCGCGGGACAGCGTGCCTAAACCCGAGCCAGGATTACATCCAGGCCTCGTCGC AGCATACGATCCGCTACCCATCGACCTCCGTGCTGGCCTCGACACCAACGCCATCACTTC CATTGTAATGTATTTGCGTTCCAGAGCACACACACACCCACACACTCACACACAAACACA CAAGTCGGTCTGTTTTTTTTTTGTTTCTGTTCAGTTTCGTTCTTACGTTTGTTTTGGATT AGTTCCTTTTGTTCTTTTCTTCTCTCTCTCCCTTCGTCTCTTCAAATCTTTCATTGAGGT TAACTGCTACTTTTAAAACATTCACTTCCCTTGTTTTGTTTGCGTTGTGTTTCTTCNTAA CCGTTTTTATATGATCTTACATCGCATTAGCATCTGCAACTTATTTAGTTTGGTTGTACC GCCACTCGNACGGGCTCGCGAAGAAAGCACTTCNCGATACGATCAAAACNAAACTTCNGC GTCCATTTCCCTTGAACGCCCTGCATTTAAACACAAGGATAATGATT



consensusID : consensus_605#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 316
fasta sequence
                              [CCGCGCACTCACACACAAACACACAAGTCGGCCTGTTTTTTTTTGTGTCTGTTCAGGTTCGTGCTTACGTTTGTTTTGGATTAGGTCCTGTAGTACTTTTCTTCTCTCTCTCCCTTTGTCTCTTCAAATCTTTCATTGAGGCTAACTGCTACTTTTAAAGCATTCACTTCCCTTGTTTTGTTTGCGGTGTGGTTCGTCTAAACCGTTTTTATATGATCTTACATCGCATTAGCATCTGCAACTTATTTAGTTTGGTTGTACCGCCACTCGTACGGGCTCGCAAAGAAAGCACTTCACGATACGATCAAAACAAACT]

[+] EMBL BM620826             [CCGCGCACTCACACACAAACACACAAGTCGGCCTGTTTTTTTTTGTGTCTGTTCAGGTTCGTGCTTACGTTTGTTTTGGATTAGGTCCTGTAGTACTTTTCTTCTCTCTCTCCCTTTGTCTCTTCAAATCTTTCATTGAGGCTAACTGCTACTTTTAAAGCATTCACTTCCCTTGTTTTGTTTGCGGTGTGGTTCGTCTAAACCGTTTTTATATGATCTTACATCGCATTAGCATCTGCAACTTATTTAGTTTGGTTGTACCGCCACTCGTACGGGCTCGCAAAGAAAGCACTTCACGATACGATCAAAACAAACT]


>consensus_605#1 CCGCGCACTCACACACAAACACACAAGTCGGCCTGTTTTTTTTTGTGTCTGTTCAGGTTC GTGCTTACGTTTGTTTTGGATTAGGTCCTGTAGTACTTTTCTTCTCTCTCTCCCTTTGTC TCTTCAAATCTTTCATTGAGGCTAACTGCTACTTTTAAAGCATTCACTTCCCTTGTTTTG TTTGCGGTGTGGTTCGTCTAAACCGTTTTTATATGATCTTACATCGCATTAGCATCTGCA ACTTATTTAGTTTGGTTGTACCGCCACTCGTACGGGCTCGCAAAGAAAGCACTTCACGAT ACGATCAAAACAAACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_605#0      AGAAGCAGTGCAATGTAGCCCGGAGCGCGAAGCTGNCAAGCTGCTACGCGCCACCTCCCA 60
consensus_605#1      ------------------------------------------------------------
                                                                                 

consensus_605#0      CTCCAACTCGCGGGACAGCGTGCCTAAACCCGAGCCAGGATTACATCCAGGCCTCGTCGC 120
consensus_605#1      ------------------------------------------------------------
                                                                                 

consensus_605#0      AGCATACGATCCGCTACCCATCGACCTCCGTGCTGGCCTCGACACCAACGCCATCACTTC 180
consensus_605#1      ------------------------------------------------------------
                                                                                 

consensus_605#0      CATTGTAATGTATTTGCGTTCCAGAGCACACACACACCCACACACTCACACACAAACACA 240
consensus_605#1      -------------------------------------CCGCGCACTCACACACAAACACA 23
                                                          ** * ******************

consensus_605#0      CAAGTCGGTCTGTTTTTTTTTTGTTTCTGTTCAGTTTCGTTCTTACGTTTGTTTTGGATT 300
consensus_605#1      CAAGTCGGCCTGTTTTTTTTT-GTGTCTGTTCAGGTTCGTGCTTACGTTTGTTTTGGATT 82
                     ******** ************ ** ********* ***** *******************

consensus_605#0      AGTTCCTTTTGTTCTTTTCTTCTCTCTCTCCCTTCGTCTCTTCAAATCTTTCATTGAGGT 360
consensus_605#1      AGGTCCTGTAGTACTTTTCTTCTCTCTCTCCCTTTGTCTCTTCAAATCTTTCATTGAGGC 142
                     ** **** * ** ********************* ************************ 

consensus_605#0      TAACTGCTACTTTTAAAACATTCACTTCCCTTGTTTTGTTTGCGTTGTGTTTCTTCNTAA 420
consensus_605#1      TAACTGCTACTTTTAAAGCATTCACTTCCCTTGTTTTGTTTGCGGTGTGGTTCGTCTAAA 202
                     ***************** ************************** **** *** **  **

consensus_605#0      CCGTTTTTATATGATCTTACATCGCATTAGCATCTGCAACTTATTTAGTTTGGTTGTACC 480
consensus_605#1      CCGTTTTTATATGATCTTACATCGCATTAGCATCTGCAACTTATTTAGTTTGGTTGTACC 262
                     ************************************************************

consensus_605#0      GCCACTCGNACGGGCTCGCGAAGAAAGCACTTCNCGATACGATCAAAACNAAACTTCNGC 540
consensus_605#1      GCCACTCGTACGGGCTCGCAAAGAAAGCACTTCACGATACGATCAAAACAAACT------ 316
                     ******** ********** ************* *************** **        

consensus_605#0      GTCCATTTCCCTTGAACGCCCTGCATTTAAACACAAGGATAATGATT 587
consensus_605#1      -----------------------------------------------
                                                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)