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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6059#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1150 fasta sequence
[GTCTGAGTGGTTTCGTTGGTTTGTATAGACCAAGAGGTAATGATTAACAGAAGTAGTCGGGGGCATTGGTATTACGGCGCGAGAGGTGAAATTCGTAGACCGTCGTAGGACCCACAGAAGCGAAAGCGTTTGCCAAGGATGCTTTCATTAATCAAGAACGAAAGTTAGAGGATCGAAGGCGATTAGACACCGCCCTAGTTCTAACCGTAAACGATGCCAATTAGCAATTGGGAGACGCTACCTCTCTTTAACGAAGCGCAGTCAAGATGAAAGCTAAAGGAGTGCTGAAAGAATACCAGGTGATCGGGCGCAACTGCCCTCGGAGAAGGAGAAGAACCCTCCGCTCTTCAAGATGCACATCTTCGCCCCGGACCACATCGTGCCAAGTCGCGCTTCTGGTACTTCCTGCGTCACTGCGTAAGTTCAAGAAGGCAACCGGCGAGATCGTCTCGGTGAAGCGCATCCTGGAGAAGACGCCGCTGAAGGTGAAGAACTTCGGCATCTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTGACCTGACCGTTGGCGGTGCCGTCACGCAGTCTACAGTGACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGATCGCCGCGTCCAAGACGCGCCGTGCGCACATCAAGCAGTTCCACAACTCGAAGATCCGATTCCCGCTGGTGCAGCGATACCACCACAAGCGCTACCGGAAGCTGTTCTCTTACCGCCGCCCGGAGACCTTCTACCAGTAAGGCGGGAGAAGCAGCGGCGCACGGCACTGTTGGGAAGACTGTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTTAGTTCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGTGTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTTGCACGGGAAATACAGTTGCGGCCCCCCTTCTCTTTCCATCCACCCCAGGGGGGGAAGTCTTTGAGCAAAGTAAAACCTCAGGACGGTGTGATACCAATGAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATG]
[+] EMBL CNS09IIK [GTCTGAGTGGTTTCGTTGGTTTGTATAGACCAAGAGGTAATGATTAACAGAAGTAGTCGGGGGCATTGGTATTACGGCGCGAGAGGTGAAATTCGTAGACCGTCGTAGGACCCACAGAAGCGAAAGCGTTTGCCAAGGATGCTTTCATTAATCAAGAACGAAAGTTAGAGGATCGAAGGCGATTAGACACCGCCCTAGTTCTAACCGTAAACGATGCCAATTAGCAATTGGGAGACGCTACCTCTCTTTAACGAAGCGCAGTCAAGATGAAAGCTAAAGGAGTGCTGAAAGAATACCAGGTGATCGGGCGCAACTGCCCTCGGAGAAGGAGAAGAACCCTCCGCTCTTCAAGATGCACATCTTCGCCCCGGACCACATCGTGCCAAGTCGCGCTTCTGGTACTTCCTGCGTCACTGCGTAAGTTCAAGAAGGCAACCGGCGAGATCGTCTCGGTGAAGCGCATCCTGGAGAAGACGCCGCTGAAGGTGAAGAACTTCGGCATCTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTGACCTGACCGTTGGCGGTGCCGTCACGCAGTCTACAGTGACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGATCGCCGCGTCCAAGACGCGCCGTGCGCACATCAAGCAGTTCCACAACTCGAAGATCCGATTCCCGCTGGTGCAGCGATACCACCACAAGCGCTACCGGAAGCTGTTCTCTTACCGCCGCCCGGAGACCTTCTACCAGTAAGGCGGGAGAAGCAGCGGCGCACGGCACTGTTGGGAAGACTGTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTTAGTTCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGTGTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTTGCACGGGA ]
[+] EMBL CNS08TY6 [ TTAACGAAGCGCAGTCAAGATGAAAGCTAAAGGAGTGCTGAAAGAATACCAGGTGATCGGGCGCAACTGCCCTCGGAGAAGGAGAAGAACCCTCCGCTCTTCAAGATGCACATCTTCGCCCCGGACCACATCGTGCCAAGTCGCGCTTCTGGTACTTCCTGCGTCACTGCGTAAGTTCAAGAAGGCAACCGGCGAGATCGTCTCGGTGAAGCGCATCCTGGAGAAGACGCCGCTGAAGGTGAAGAACTTCGGCATCTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTGACCTGACCGTTGGCGGTGCCGTCACGCAGTCTACAGTGACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGATCGCCGCGTCCAAGACGCGCCGTGCGCACATCAGGCAGTTCCACAACTCGAAGCTCCGATTCCCGCTGGTGCAGCGATACCACCACAAGCGCTACCGGAAGCTGTTCTCTTACCGCCGCCCGGAGACCTTCTACCAGTAAGGCGGGAGAAGCAGCGGCGCACGGCACTGTTGGGAAGACTGTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTGAGTTCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGTGTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTTGCACCGGAAATACAGTTGCGGCCCCCCTTCTCTTTCCATCCACCCCAGGGGGGGAAGTCTTTGAGCAAAGTAAAACCTCAGGACGGTGTGATACCAATGAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATG]
consensusID : consensus_6059#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 690 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGCCGCTGAGGCTGCGTATCCCTTTTTTAAGGAATTAATCGGTTTATTTAACTGTGTTTTGCGTTGAATTTCGTTTAGCAAATTCTGTGCTCTGAAAGGGAAAGCGTCTGCCGTGTGGTTGCCAATGAAGTGAAGGAAATATATTGCCAAATTTATCTACGAAATCAAAACAATTCTGGTGCTCCAAGACTTTTCCCTGGAGCAGAATAACAACTCGCTCTGGTCGCTTCGTAGCATTTCCACACTGTGCTAGCATTTGGTTGCGCCCCTGCACACAAACAATTCGTTGTTCCGGCCGGGAGTGTAAAGACGCTTTTCGAAAGGGAAAGTAAAAACCTAATTTGTGAGGTCAAGCACACAAGGAGCAGCTCACAATGAGTAGGAAACCAAAATCGTCGGGTTATTCCAAAACAAATGACGACAGTAGCGATGAGCTACCGTACAAGGATCATAAAAACCGCAACCGCTCAAAGCACAAACACCGGTCGGATTCCGCGGAACGCACCTACGACGATTACGCTGAGTCCGGTCGTGAGAAATCATCCCGTGATCGGTCCAGATGGGAGGAGAAGAAAAGTTATCACAGGGATAACAACAGAGACCGGGAACAGACGACTTCGAAATATCAAGATGATAGAAGAGAGGACCAGAA]
[+] EMBL BM586613 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGCCGCTGAGGCTGCGTATCCCTTTTTTAAGGAATTAATCGGTTTATTTAACTGTGTTTTGCGTTGAATTTCGTTTAGCAAATTCTGTGCTCTGAAAGGGAAAGCGTCTGCCGTGTGGTTGCCAATGAAGTGAAGGAAATATATTGCCAAATTTATCTACGAAATCAAAACAATTCTGGTGCTCCAAGACTTTTCCCTGGAGCAGAATAACAACTCGCTCTGGTCGCTTCGTAGCATTTCCACACTGTGCTAGCATTTGGTTGCGCCCCTGCACACAAACAATTCGTTGTTCCGGCCGGGAGTGTAAAGACGCTTTTCGAAAGGGAAAGTAAAAACCTAATTTGTGAGGTCAAGCACACAAGGAGCAGCTCACAATGAGTAGGAAACCAAAATCGTCGGGTTATTCCAAAACAAATGACGACAGTAGCGATGAGCTACCGTACAAGGATCATAAAAACCGCAACCGCTCAAAGCACAAACACCGGTCGGATTCCGCGGAACGCACCTACGACGATTACGCTGAGTCCGGTCGTGAGAAATCATCCCGTGATCGGTCCAGATGGGAGGAGAAGAAAAGTTATCACAGGGATAACAACAGAGACCGGGAACAGACGACTTCGAAATATCAAGATGATAGAAGAGAGGACCAGAA]
[+] EMBL BM615873 [ TGCGTATCCCTTTTTTAAGGAATTAATCGGTTTATTTAACTGTGTTTTGCGTTGAATTTCGTTTAGCAAATTCTGTGCTCTGAAAGGGAAAGCGTCTGCCGTGTGGTTGCCAATGAAGTGAAGGAAATATATTGCCAAATTTATCTACGAAATCAAAACAATTCTGGTGCTCCAAGACTTTTCCCTGGAGCAGAATAACAACTCGCTCTGGTCGCTTCGTAGCATTTCCACACTGTGCTAGCATTTGGTTGCGCCCCTGCACACAAACAATTCGTTGTTCCGGCCGGGAGTGTAAAGACGCTTTTCGAAAGGGAAAGTAAAAACCTAATTTGTGAGGTCAAGCACACAAGGAGCAGCTCACAATGAGTAGGAAACCAAAATCGTCGGGTTATTCCAAAACAAATGACGACAGGAGCGATGAGCTACCGTACAAGGATCATAAAAACCGCAACCGCTCAAAGCACAAACACCGGTCGGATTCCGCGGAACGCACCTACGACGATTACGCTGA ]
consensusID : consensus_6059#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 179 fasta sequence
[GAAGCTGACGACGACCGGCTCCTACGGGCAGGACAAGCGCTGCAATGCGCTCCAGCTGCGCACCGGCCTGACCGCGGCGAAGGCTCTCGAGCAGGAAGCTACGGCACGCTCGGCCGCCGCCGCTGCCGCTGCTGCCACCCCCGCCACTGCTGGGGAGCAGGAAGCCGAACCGGCGCAAG]
[+] EMBL BX606813 [GAAGCTGACGACGACCGGCTCCTACGGGCAGGACAAGCGCTGCAATGCGCTCCAGCTGCGCACCGGCCTGACCGCGGCGAAGGCTCTCGAGCAGGAAGCTACGGCACGCTCGGCCGCCGCCGCTGCCGCTGCTGCCACCCCCGCCACTGCTGGGGAGCAGGAAGCCGAACCGGCGCAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6059#0 GTCTGAGTGGTTTCGTTGGTTTGTATAGACCAAGAGGTAATGATTAACAGAAGTAGTCGG 60
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ------------------------------------------------------------
consensus_6059#0 GGGCATTGGTATTACGGCGCGAGAGGTGAAATTCGTAGACCGTCGTAGGACCCACAGAAG 120
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ------------------------------------------------------------
consensus_6059#0 CGAAAGCGTTTGCCAAGGATGCTTTCATTAATCAAGAACGAAAGTTAGAGGATCGAAGGC 180
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ------------------------------------------------------------
consensus_6059#0 GATTAGACACCGCCCTAGTTCTAACCGTAAACGATGCCAATTAGCAATTGGGAGACGCTA 240
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ------------------------------------------------------------
consensus_6059#0 CCTCTCTTTAACGAAGCGCAGTCAAGATGAAAGCTAAAGGAGTGCTGAAAGAATACCAGG 300
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ------------------------------------------------------------
consensus_6059#0 TGATCGGGCGCAACTGCCCTCGGAGAAGGAGAAGAACCCTCCGCTCTTCAAGATGCACAT 360
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 -------CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGCCGCTGAGGCTGC 53
consensus_6059#0 CTTCGCCCCGGACCACATCGTGCCAAGTCGCGCTTCTGGTACTTCCTGCGTCACTGCGTA 420
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 GTATCCCTTTTTTAAGGAATTAATCGGTTTATTTAACTGTGTTTTGCGTTGAATTTCGTT 113
consensus_6059#0 AGTTCAAGAAGGCAACCGGCGAGATCGTCTCGGTGAAGCGCATCCTGGAGAAGACGCCGC 480
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 TAGCAAATTCTGTGCTCTGAAAGGGAAAGCGTCTGCCGTGTGGTTGCCAATGAAGTGAAG 173
consensus_6059#0 TGAAGGTGAAGAACT-TCGGCATCTGGTTGCGTTACGATTC--GCGCTCCGGTACGCACA 537
consensus_6059#2 -GAAGCTGACGACGA-CCGGCTCCTACGGGCAGGACAA-----GCGCTGCAATGCGCTCC 53
consensus_6059#1 GAAATATATTGCCAAATTTATCTACGAAATCAAAACAATTCTGGTGCTCCAAGACTTTTC 233
** * * * ** * * *** * *
consensus_6059#0 ACATGTACCGCG-AGTACCGTGACCTGACCGTTGGCGGTGCCGTCACGCAGTCTACAGTG 596
consensus_6059#2 AGCTGCGC--------ACC--GGCCTGACCGCGGCGAAGGCTCTCGAGCAGGAAGCTACG 103
consensus_6059#1 CCTGGAGCAGAATAACAACTCGCTCTGGTCGCTTCGTAGCATTTCCA-CACTGTGCTAGC 292
* * * * * *** ** ** ** *
consensus_6059#0 ACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGA 656
consensus_6059#2 GCACGCTCGGCCGCCGCCGCTGCCGCTGCTGCC--ACCCCCGCCACTGCTGGGGAGCAGG 161
consensus_6059#1 ATTTGGTTGCGCCCCTGCACACAAACAATTCGTT-GTTCCGGCCGGGAGTGTAAAGACGC 351
* * * * * * * * *
consensus_6059#0 TCGCCGCGTCCAAGACGCGCCGTGCGCACATCAAGCAGTTCCACAACTCGAAGATCCGAT 716
consensus_6059#2 AAGCCGAA-CCGGCGCAAG----------------------------------------- 179
consensus_6059#1 TTTTCGAA---AGGGAAAGTAAAAACCTAATTTGTGAGGTCAAGCACACAAGGAGCAGCT 408
** *
consensus_6059#0 TCCCGCTGGTGCAGCGATACCACCACAAGCGCTACCGGAAGCTGTTCTCTTACCGCCGCC 776
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 CACAATGAGTAGGAAACCAAAATCGTCGG-GTTATTCCAAAACAAATGACGACAGTAGCG 467
consensus_6059#0 CGGAGACCTTCTACCAGTAAGGCGGGAGAAGCAGCGGCGCACGGCACTGTTGGGAAGACT 836
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ATGAGCTACCGTACAAGGATCATAAAAACCGCAACCGCTCAAAGCACAAACACCGGTCGG 527
consensus_6059#0 GTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTT 896
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ATTCCGCGGAACGCACCTACGACGATTACGCTGAGTCCGGTCGTGAGAAATCATCCCGTG 587
consensus_6059#0 CGCGTTTGGAGTTAGTTCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCG 956
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ATCGGTCCAGATGGGAGGAGAAGAAAAGTTATCACAGGGATAACAACAGAGACCGGGAAC 647
consensus_6059#0 TGTTTACGGTGCGGTGTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTT 1016
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 AGACGACTTCGAAATATCAAGATGATAGAAGAGAGGACCAGAA----------------- 690
consensus_6059#0 GCACGGGAAATACAGTTGCGGCCCCCCTTCTCTTTCCATCCACCCCAGGGGGGGAAGTCT 1076
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ------------------------------------------------------------
consensus_6059#0 TTGAGCAAAGTAAAACCTCAGGACGGTGTGATACCAATGAAAAAAAAAAAAAAAAAAAAA 1136
consensus_6059#2 ------------------------------------------------------------
consensus_6059#1 ------------------------------------------------------------
consensus_6059#0 AAAAAGGCCACATG 1150
consensus_6059#2 --------------
consensus_6059#1 --------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||