Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 6091 cluster # 6091       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6091#0 length = 1495 sequences # 5  

consensusID : consensus_6091#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1495
fasta sequence
                              [AATGCACCTTTTCTTTATTTTCAAAACTTTTCATATAACATATTTCCACTTTCGAGTTTTTTGCCCCCCGTTAAGCTAAGCTTTTATTTACCCC-CCTTTTCTTACTACTTTTAAGAAACTTTGGTGTTCTTCCAGTCCAGCCAGTCCAGTAGTCACTCTTCAGTTCGTATCGTAAAAGTAGTGCGCCAGTGGGTAGCGTATCGTAAAGGCAAACGCAACGCACAGCAGCTGAAACACGACCAGCAACCGATTTAGACGATCCTCTCTGATCGGCCCCGTCAGCAGGATGCAGAAGTTGATGATGGTAAAGTTGTTGCACGTGACCGTCTTACCATCGGCGTCCAGCTCGCACCGTATCAGGCGTAGATGGCGGAACACCTGGTAGCAGAGCCGGCCGAGCGGGTTCAGCTCGTCGACGCGGAACTGTGTTCGGCTGATGTGTAGCAGGTCCGTTGCCGGATCGTGCTTTGGCATACGATGGCGGGGACAGGGAATGAACCGGAACAGCTGCGGCACGGAGTAGAGGAAGTTGAGCACTTGTGGGATGAAGAACAGCAGTTCGGTTTTGCTGAAGTGACCGAGGATGCCGACGACCGCGAACGTCATGCCGGACAGGTAGTTGAACGTATCGCCCACAAACACCTGGGAAGGATATCTATTGTATCGCCAAAGCGCCA-CTTAGCACCCGATGTAAGGCAGCATAATGTACAGCGAAAACTCGTGCGCCTCGCTGTGGTTACCGTGCAGGATCTCCAGCACATTGAACAGCACGATCGAGCCGGCAATGATCAACGATTGGCACACCTCGAGCCCATTAATGCCGGCCAGGATGTTGATCG-CGTTCGTACAAAACACTGCCAGCATGCCCATAAACACGTAGTACAGTACACCGATGTCGAGCGAGTGGCCCAGCAGCGGCCGCACAATCTTGGGCAGTATGACGGTGGTCGAGTTGAAGTTGGTGTAGTACACCATCAACAGCGGCAGTGAGGCAACCGTCGGAGGGTACAGCTTATCGCGCCACCGCAAATTCAGCACATCGTCCGCAAACCCGAGCAGGATCATGCAGCAGATCGAGAGCATGGCTGCGATGAACTCTACGAA-CTTATCGTGCGGAAA-GTCGCCCTGGATGGTGGCGGAAAAGTTGCGCAAGAAAGGCACGGGTATGAAGAGGAACAGCGACACCAGAAAGATGCATCCCGTGACCACACCGAACGCTTCGGGAATCTTGGGCTTGGAGGTTTTGTTCATGTCGATCCCGTACAGATTTGCATTGATAAACATCGGCTTCATCTTCGGAATGAGGCTGCGACCGGCATAGTACGCCCCACACGATATGGCCACATTTACCAGCAATGGCACGGGAAGGGACACCGTGTGCCCTAGCACATCGAACTCAAA-CCGGTGAAACAAATGGCATTTTACTGCCCGAACTCAACACAAACTGAAGAAGAATCGACGGTGGAAGAGTTACTAATGCACCTCGNGGGATTCT]

[+] EMBL CNS08MVD             [AATGCACCTTTTCTTTATTTTCAAAACTTTTCATATAACATATTTCCACTTTCGAGTTTTTTGCCCCCCGTTAAGCTAAGCTTTTATTTACCCC CCTTTTCTTACTACTTTTAAGAAACTTTGGTGTTCTTCCAGTCCAGCCAGTCCAGTAGTCACTCTTCAGTTCGTATCGTAAAAGTAGTGCGCCAGTGGGTAGCGTATCGTAAAGGCAAACGCAACGCACAGCAGCTGAAACACGACCAGCAACCGATTTAGACGATCCTCTCTGATCGGCCCCGTCAGCAGGATGCAGAAGTTGATGATGGTAAAGTTGTTGCACGTGACCGTCTTACCATCGGCGTCCAGCTCGCACCGTATCAGGCGTAGATGGCGGAACACCTGGTAGCAGAGCCGGCCGAGCGGGTTCAGCTCGTCGACGCGGAACTGTGTTCGGCTGATGTGTAGCAGGTCCGTTGCCGGATCGTGCTTTGGCATACGATGGCGGGGACAGGGAATGAACCGGAACAGCTGCGGCACGGAGTAGAGGAAGTTGAGCACTTGTGGGATGAAGAACAGCAGTTCGGTTTTGCTGAAGTGACCGAGGATGCCGACGACCGCGAACGTCATGCCGGACAGGTAGTTGAACGTATCGCCCACAAACACCTGGGAAGGATATCTATTGTATCGCCAAAGCGCCA CTTAGCACCCGATGTAAGGCAGCATAATGTACAGCGAAAACTCGTGCGCCTCGCTGTGGTTACCGTGCAGGATCTCCAGCACATTGAACAGCACGATCGAGCCGGCAATGATCAACGATTGGCACACCTCGAGCCCATTAATGCCGGCCAGGATGTTGATCG CGTTCGTACAAAACACTGCCAGCATGCCCATAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08DAL             [ ATGCA CTTTTCTTTATTTTCAAAACTTTTCATATAACATATTTCCACTTTCGAGTTTTTTGCCCCCTGTAAAGCTAAGCTTTTATTTACCCCACCTTTTCTTACTACTTTTAAGAAACTTTGGTGTTCTTCCAGTCCAGCCAGTCCAGTAGTCACTCTTCAGTTCGTATCGTAAAAGTAGTGCGCCAGTGGGTAGCGTATCGTAAAGGCAAACGCAACG ACAGCAGCTGAAACACGACCAGCAACCGATTTAGACGATCCTCTCTGATCGGCCCCGTCAGCAGGATGCAGAAGTTGATGATGGTAAAGTTGTTGCACGTGACCGTCTTACCATCGGCGTCCAGCTCGCACCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS08MVC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGAAGTGACCGAGGATGCCGACGACCGCGAACGTCATGCCGGACAGGTAGTTGAACGTATCGCCCACAAACACCTGGGAAGGATATCTATTGTATCGCCAAAGCGCCAGCGTAGCA CCGATGTAAGGCAGCATAATGTACAGCGAAAACTCGTGCGCCTCGCTGTGGTTACCGTGCAGGATCTCCAGCACATTGAACAGCACGATCGAGCCGGCAATGATCAACGATTGGCACACCTCGAGCCCATTAATGCCGGCCAGGATGTTGATCGTCGTTCGTACAAAACACTGCCAGCATGCCCATAAACACGTAGTACAGTACACCGATGTCGAGCGAGTGGCCCAGCAGCGGCCGCACAATCTTGGGCAGTATGACGGTGGTCGAGTTGAAGTTGGTGTAGTACACCATCAACAGCGGCAGTGAGGCAACCGTCGGAGGGTACAGCTTATCGCGCCACCGCAAATTCAGCACATCGTCCGCAAACCCGAGCAGGATCATGCAGCAGATCGAGAGCATGGCTGCGATGAACTCTACGAA CTTATCGTGCGGAAA GTCGCCCTGGATGGTGGCGGAAAAGTTGCGCAAGAAAGGCACGGGTATGAAGAGGAACAGCGACACCAGAAAGATGCATCCCGTGACCACACCGAACGCTTCGGGAATCTTGGGCTTGGAGGTTTTGTTCATGTCGATCCCGTACAGATTTGCATTGATAAACATCGGCTTCATCTTCGGAATGAGGCTGCGACCGGCATAGTACGCCCCACACGATATGGCCACATTTACCAGCAATGGCACGGGAAGGGACACCGTGTGCCCTAGCACATCGAACTCAAATCCGGTGAAACAAATGGCATTTTA                                                                       ]
[-] EMBL AL934974             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAGGTACAGCTTATCGCGCCACCGCAAGTTCAGCACATCGTCCGCAAACCCGAGCAGGATCATGCAGCAGATCGAGAGCATGGCTGCGATAAACTCTACGAA CTTATCGTGCGGAAA GTCACCCTGGATGGTGGCGGAAAAGTTGCGCAAGAAAGGCACGGGTATGAAGAGGAACAGCGACACCAGAAAGATGCATCCCGTGACCACACCGAACGCTTCGGGAATCTTGGGCTTGGAGGTTTTGTTCATGTCGATTCCGTACAGATTCGCATTGATAAACATCGGCTTCATCTTCGGAATGAGGCTGCGACCGGCATAGTACGCCCCACACGATATGGCCACATTTACCAGCAATGGCACCGGAAGGGACACCGTGTGCCCTAGCACATCGAACTCAAA CCGGTGAAAC AATGGCATTTTACTGCCCGAACTCAACACAAACTGAAGAAGAATCGACGGTGGAAGAGTTACTAATGCACCTCGNGGGATTCT]
[-] EMBL CNS08DAK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATCATGCAGCAGATCGAGAGCATGGCTGCGATGAACTCTACGAATCTTATCGTGCGGAAATGTCGCCCTGGATGGTGGCGGAAAAGTTGCGCAAGAAAGGCACGGGTATGAAGAGGAACAGCGACACCAGAAAGATGCATCCCGTGACCACACCGAACGCTTCGGGAATCTTGGGCTTGGAGGTTTTGTTCATGTCGATCCCGTACAGATTTGCATTGATAAACATCGGCTTCATCTTCGGAATGAGGCTGCGACCGGCATAGTACGCCCCACACGATATGGCCACATTTACCAGCAATGGCACGGGAAGGGACACCGTGTGCCCTAGCACATCGAACTCAAA CCGGTGAAAC                                                                                    ]


>consensus_6091#0 AATGCACCTTTTCTTTATTTTCAAAACTTTTCATATAACATATTTCCACTTTCGAGTTTT TTGCCCCCCGTTAAGCTAAGCTTTTATTTACCCCCCTTTTCTTACTACTTTTAAGAAACT TTGGTGTTCTTCCAGTCCAGCCAGTCCAGTAGTCACTCTTCAGTTCGTATCGTAAAAGTA GTGCGCCAGTGGGTAGCGTATCGTAAAGGCAAACGCAACGCACAGCAGCTGAAACACGAC CAGCAACCGATTTAGACGATCCTCTCTGATCGGCCCCGTCAGCAGGATGCAGAAGTTGAT GATGGTAAAGTTGTTGCACGTGACCGTCTTACCATCGGCGTCCAGCTCGCACCGTATCAG GCGTAGATGGCGGAACACCTGGTAGCAGAGCCGGCCGAGCGGGTTCAGCTCGTCGACGCG GAACTGTGTTCGGCTGATGTGTAGCAGGTCCGTTGCCGGATCGTGCTTTGGCATACGATG GCGGGGACAGGGAATGAACCGGAACAGCTGCGGCACGGAGTAGAGGAAGTTGAGCACTTG TGGGATGAAGAACAGCAGTTCGGTTTTGCTGAAGTGACCGAGGATGCCGACGACCGCGAA CGTCATGCCGGACAGGTAGTTGAACGTATCGCCCACAAACACCTGGGAAGGATATCTATT GTATCGCCAAAGCGCCACTTAGCACCCGATGTAAGGCAGCATAATGTACAGCGAAAACTC GTGCGCCTCGCTGTGGTTACCGTGCAGGATCTCCAGCACATTGAACAGCACGATCGAGCC GGCAATGATCAACGATTGGCACACCTCGAGCCCATTAATGCCGGCCAGGATGTTGATCGC GTTCGTACAAAACACTGCCAGCATGCCCATAAACACGTAGTACAGTACACCGATGTCGAG CGAGTGGCCCAGCAGCGGCCGCACAATCTTGGGCAGTATGACGGTGGTCGAGTTGAAGTT GGTGTAGTACACCATCAACAGCGGCAGTGAGGCAACCGTCGGAGGGTACAGCTTATCGCG CCACCGCAAATTCAGCACATCGTCCGCAAACCCGAGCAGGATCATGCAGCAGATCGAGAG CATGGCTGCGATGAACTCTACGAACTTATCGTGCGGAAAGTCGCCCTGGATGGTGGCGGA AAAGTTGCGCAAGAAAGGCACGGGTATGAAGAGGAACAGCGACACCAGAAAGATGCATCC CGTGACCACACCGAACGCTTCGGGAATCTTGGGCTTGGAGGTTTTGTTCATGTCGATCCC GTACAGATTTGCATTGATAAACATCGGCTTCATCTTCGGAATGAGGCTGCGACCGGCATA GTACGCCCCACACGATATGGCCACATTTACCAGCAATGGCACGGGAAGGGACACCGTGTG CCCTAGCACATCGAACTCAAACCGGTGAAACAAATGGCATTTTACTGCCCGAACTCAACA CAAACTGAAGAAGAATCGACGGTGGAAGAGTTACTAATGCACCTCGNGGGATTCT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)