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Anopheles gambiae
cluster # 6118 cluster # 6118       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6118#0 length = 1388 sequences # 5  

consensusID : consensus_6118#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1388
fasta sequence
                              [TGAACCATTTCCCACGTAAAACACGTTAGTAAGAGATAGAGAGATTATTCGCCACCGGCGTAGCGCGCATAGATCGAACAACAAACAACCAAGCAATTTACTACTAGTTCATTGGGGGAAAGGATTATATTATGATAATGTTTACACAGCTCTACGGGGTGTAGACGGCCACAAAGGGTGGAGGGGGGAGGGCATTATCTCCCCCACCCATTCGTAAGTTAGTAAAGGAGAGTGTAGGTACGATAGATTTAGTACGATTAATACCGTTTTTTTTCCCAAGAGCGAATCAGGTTGTTCCTGCACATGTGGCTTACGCTATATCGATGCGCAGGAGCCCGATTACGGCGCGCACCATGTGCATACAGTGCATAACAAACAAAAGAAAGAACGGACTAAACAAGAAGGTTGTGTATGCCGCAAGGAAAATGGATTTCTAATGTTTTCCGGTGGTAAAATAAAACAAATAACTAAAGCGTTGCACTAGACACATTCCGCTGCCAATATTCCAACGTGCGGTTGCGCGCTTAACTGTACATATATTTCCACATTACAACACATAAAAAACACCTTTAACGTCGATACACACATATTTCTCTATAACGAAAGCGAGCTCTACCGATAGGAACCACTGTAGTAGTAGTAGTAGCAGTAGTAGTAGTTGGTACACTGTACACGTCTCTTAATATACCTCTACATCAATGATATCATATGAAAAGAAAACTCTCTTGCAATGCTGTGTAGGATAGATTGTGTTTAGAAAAGTGTTTTTTTTCTTTCCTTTTCTACGCTCTTCCCTTTTTCTGCTCCTCATTCCTTTCCTACAAAATTGCCTGTGCTGTAGTCAGGAACACCAACCAAAAGGGGAAAGGAGAGATAGTACAGATTTCATACGGCGAACGCACATAAGCAGACCGGAGTGTAGTGTAGTTCCGTAACCCGTAAGCGGTAGAATCAAGAAGCA--AGAGTATTGTTAAACCTCGTTTACAATGTATTTCGTAGTCCTGTGGCGCCAACCACCACATAAACAATTAGACGTATAGAGACACAACACAAA-----AGA-AC-CACACACACACTAACCCAGCCAACCGTCCATGGAAGCAGTTATTACCACACAAAACAAACGCAAGCAACATAAGTTTAAGTGAAGATGAATATGACTGTGATTCGTTACGATCAAATGTGGGTTCAGTTGTTGTTGGTTGCTTGGTGTGTACCTACCACCCAGGAGTGGGAGCGGGGTGGTGGTGGAAATGGCTGATTGTTTTAGCAAAGCATTGTTGTTGGTTTGTTTGTTTTTGGTTGTTGTTTTGTTATAAAATTTAAAATAAAACAGACAAATAAGAAGGCAAATTTGCACGACCCTCGTGTGCACCAGCGGAGGGAGGACGGTC]

[+] EMBL BM577919             [TGAACCATTTCCCACGTAAAACACGTTAGTAAGAGATAGAGAGATTATTCGCCACCGGCGTAGCGCGCATAGATCGAACAACAAACAACCAAGCAATTTACTACTAGTTCATTGGGGGAAAGGATTATATTATGATAATGTTTACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM624421             [                                                            ccGCGCGCATAGATCAAACAACAAACAACCAAGCAATTTACTACTAGTTCATTGGGTGAAAGGATTATATTATGATAATGTTTACACAGCTCTACGGGGTGTAGACGGCCACAAAGGGTGGAGGGGGGAGGGCATTATCTCCCCCACCCATTCGTAAGTTAGTAAAGGAGAGTGTAGGTACGATAGATTTAGTACGATTAATACCGTTTTTTTTCCCAAGAGCGAATCAGGTTGTTCCTGCACATGTGGCTTACGCTATATCGATGCGCAGGAGCCCGATTACGGCGCGCACCATGTGCATACAGTGCATAACAAACAAAAGAAAGAACGGACTAAACAAGAAGGTTGTGTATGCCGCAAGGAAAATGGATTTCTAATGTTTTCCGGTGGTAAAATAAAACAAATAACTAAAGCGTTGCACTAGACACATTCCGCTGCCAATATTCCAACGTGCGGTTGCGCGCTTAACTGTACATATATTTCCACATTACAACACATAAAAAACACCTTTAACGTCGATACACACATATTTCTCTATAACGAAAGCGAGCTCTACCGATAGGAACCACTGTAGTAGTAGTAGTAGCAGTAGTtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX621278             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CACACATATTTCTCTATAACGAAAGCGAGCTCTACCGATAGGAACCACTGCAGTAGTAGTAGTAGTAGTAGTAGTAGTTGGTACACTGTACACGTCTCTTAATATACCTCTACATCAATGATATCATATGAAAAGAAAACTCTCTTGCAATGCTGTGTAGGATAGATTGTGTTTAGAAAAGTGTTTTTTTTCTTTCCTTTTCTACGCTCTTCCCTTTTTCTGCTCCTCATTCCTTTCCTACAAAATTGCCTGTGCTGTAGTCAGGAACACCAACCAAAAGGGGAAAGGAGAGATAGTACAGATTTCATACGGCGAACGCACATAAGCAGACCGGAGTGTAGTGTAGTTCCGTAACCCGTAAGCGGTAGAATCAAGAAGCA  AGAGTATTGTTAAACCTCGTTTACAATGTATTTCGTAGTCCTGTGGCGCCAACCACCACATAAACAATTAGACGTATAGAGACACAACACAAA     AGA AC CACACACACACTAACCCAGCCAACCGTCCATGGAAGCAGTTATTACCACACAAAACAAACGCAAGCAACATAAGTTTAAGTGAAGATGAATATGACTGTGATTCGTTACGATCAAATGTGGGTTCAGTTGTTGTTGGTTGCTTGGTGTGTACCTACCACCCAGGAGTGGGAGCGGGGTGGTGGTGGAAATGGCTGATTGTTTTAG                                                                                                                            ]
[+] EMBL BM636232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgGGAACCACTGTAGTAGTAGTAGTAGCAGTAGT  TTGT  ACACACTGTACACGTCTCTTAATATACCTCTACATCAATGATATCATATGA    AAAACTCTCGTGCAATGCTGTGTAGGATAGATTGTGTTTAGAAAAGTG   TTTTTCTTTCCTTTTCTACGCTCTTCCCTTTTCCTCCTCCTCATTCCTTTCCTCCAACATTGCCTGTGCTGTAGTCAGGAACACCAACCAAAGGGGGAAAGGAGAGATAGTACAGATTTCATACGGCAAACGCACACAAGCAGACCGGAGTGTAGTGTAGTTCCGTAACCCGTAAGCGGTAGAATCAAGAAGCAGCAGAGTATTGTTACAACTCGTTTACAATGTATTTCTTAGTCCTGTGGCGCCAACCACCACATAAACAATTAGACGTATAGAGACACAACACAAACAACCACACACACACACACACACTAACCCAGCCAACCGTCCATGGAAGCAGTTATTACCACACAAAACAAACGCAAGCAACATAAGTTTAAGTGAAGATGAATATGACTGTGATTCGTTACGATCAAATGTGGGTTCAGTTGTTGTTGGTTGCTTGGTGTG    TACCACCCAGGAGTGGGAGCGGGGTGGTGGaaa                                                                                                                                               ]
[+] EMBL BX618217             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAGTAGTAGTTGGTACACTGTACACGTCTCTTAATATACCTCTACATCAATGATATCATATGAAAAGAAAACTCTCTTGCAATGCTGTGTAGGATAGATTGTGTTTAGAAAAGTGTTTTTTTTCTTTCCTTTTCTACGCTCTTCCCTTTTTCTGCTCCTCATTCCTTTCCTACAAAATTGCCTGTGCTGTAGTCAGGAACACCAACCAAAAGGGGAAAGGAGAGATAGTACAGATTTCATACGGCGAACGCACATAAGCAGACCGGAGTGTAGTGTAGTTCCGTAACCCGTAAGCGGTAGAATCAAGAAGCA  AGAGTATTGTTAAACCTCGTTTACAATGTATTTCGTAGTCCTGTGGCGCCAACCACCACATAAACAATTAGACGTATAGAGACACAACACAAA     AGA AC CACACACACACTAACCCAGCCAACCGTCCATGGAAGCAGTTATTACCACACAAAACAAACGCAAGCAACATAAGTTTAAGTGAAGATGAATATGACTGTGATTCGTTACGATCAAATGTGGGTTCAGTTGTTGTTGGTTGCTTGGTGTGTACCTACCACCCAGGAGTGGGAGCGGGGTGGTGGTGGAAATGGCTGATTGTTTTAGCAAAGCATTGTTGTTGGTTTGTTTGTTTTTGGTTGTTGTTTTGTTATAAAATTTAAAATAAAACAGACAAATAAGAAGGCAAATTTGCACGACCCTCGTGTGCACCAGCGGAGGGAGGACGGTC]


>consensus_6118#0 TGAACCATTTCCCACGTAAAACACGTTAGTAAGAGATAGAGAGATTATTCGCCACCGGCG TAGCGCGCATAGATCGAACAACAAACAACCAAGCAATTTACTACTAGTTCATTGGGGGAA AGGATTATATTATGATAATGTTTACACAGCTCTACGGGGTGTAGACGGCCACAAAGGGTG GAGGGGGGAGGGCATTATCTCCCCCACCCATTCGTAAGTTAGTAAAGGAGAGTGTAGGTA CGATAGATTTAGTACGATTAATACCGTTTTTTTTCCCAAGAGCGAATCAGGTTGTTCCTG CACATGTGGCTTACGCTATATCGATGCGCAGGAGCCCGATTACGGCGCGCACCATGTGCA TACAGTGCATAACAAACAAAAGAAAGAACGGACTAAACAAGAAGGTTGTGTATGCCGCAA GGAAAATGGATTTCTAATGTTTTCCGGTGGTAAAATAAAACAAATAACTAAAGCGTTGCA CTAGACACATTCCGCTGCCAATATTCCAACGTGCGGTTGCGCGCTTAACTGTACATATAT TTCCACATTACAACACATAAAAAACACCTTTAACGTCGATACACACATATTTCTCTATAA CGAAAGCGAGCTCTACCGATAGGAACCACTGTAGTAGTAGTAGTAGCAGTAGTAGTAGTT GGTACACTGTACACGTCTCTTAATATACCTCTACATCAATGATATCATATGAAAAGAAAA CTCTCTTGCAATGCTGTGTAGGATAGATTGTGTTTAGAAAAGTGTTTTTTTTCTTTCCTT TTCTACGCTCTTCCCTTTTTCTGCTCCTCATTCCTTTCCTACAAAATTGCCTGTGCTGTA GTCAGGAACACCAACCAAAAGGGGAAAGGAGAGATAGTACAGATTTCATACGGCGAACGC ACATAAGCAGACCGGAGTGTAGTGTAGTTCCGTAACCCGTAAGCGGTAGAATCAAGAAGC AAGAGTATTGTTAAACCTCGTTTACAATGTATTTCGTAGTCCTGTGGCGCCAACCACCAC ATAAACAATTAGACGTATAGAGACACAACACAAAAGAACCACACACACACTAACCCAGCC AACCGTCCATGGAAGCAGTTATTACCACACAAAACAAACGCAAGCAACATAAGTTTAAGT GAAGATGAATATGACTGTGATTCGTTACGATCAAATGTGGGTTCAGTTGTTGTTGGTTGC TTGGTGTGTACCTACCACCCAGGAGTGGGAGCGGGGTGGTGGTGGAAATGGCTGATTGTT TTAGCAAAGCATTGTTGTTGGTTTGTTTGTTTTTGGTTGTTGTTTTGTTATAAAATTTAA AATAAAACAGACAAATAAGAAGGCAAATTTGCACGACCCTCGTGTGCACCAGCGGAGGGA GGACGGTC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)