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Anopheles gambiae
cluster # 6120 cluster # 6120       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6120#0 length = 1411 sequences # 5  

consensusID : consensus_6120#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1411
fasta sequence
                              [CCTGCTTTGCGAGTTTGCTTTATTTTGGTGCTGCCGTTTGTCCTCCCCCGCCCCACCAAAAAAACGACGACGACGACGACGACGACGACCCGCCACCCCCGGT-AGGCCCCGGCCAT-GGAGGAGGAAGCGGCGCTGGCAGCGGCAACGACGGCCGTGAACGCGTCCACCGCGGCGATGCTGCTGCTGAGCGGACACAGTACCTCGCACCACCTCCACCACCATCAACAGCACCAGCACGATTTCAAATGGACGCACGAGCGCTGCCTGCTGCTGCTGCACGAGTACGATCTGCTGAAGGACAAGTTTAAGGATCGCAAGCACAAAAAGAAGGACCTGTGGGCGGAGATCAGCATGAAGTTCAAGAAGATCTACGCGTACGATCTTGAGTGGGACGTTGCGTACAAAAAGTTCCGAAATCTCAAACAAACGTTCGAACAGGTGCGAGCCAAAATGCAACAGCAAGCTATTACCGGGCAGATTAGCAATCGCCCCAAGTGGGCGTACTTTGAAAAGTTCCAGCAAATACTGGACGATCCCGGCATCCCGGCGTACAGCTACGGCGATCCGGCCGCCGCAGTCCACCATCACAAGCACGAGGAGCAAGAGGAACAGGAAGACCATCATCATCATCATCATCACAACGCGCGGCACGATCATCACATACACCAGCACCACGATCACCATGCGGGGCAGCAGCACGTGGTGCACGCGCACCTTCGATCCGGCCACCGTCGGGCAGGTGCTGGCGGCCGGGGAAGACTTTACCGACACGCTCGTGACCGTGTTCCCCATGGGCGAGGAGGAAGAGGAGGAGCAGGAGCTGGAAATTCCTTCCCAACCGGTGGAAGAGAGCGGCGAGGAGGAGGAGGCGGCGGCGGCGGCGT-CCGCTCGAAGGTAGAGCAGGTAGAGGAACAGCTCCAGGAGGTGGAGGAAGAGGAGGAACCGGTACTGCTGGAGGAGGCTGCAGAGGAGGAAGAGCTGACGGTGGAGCAGCAGCAGCAGCACCACCAGCAGCAGCTGGACGAAACGGAGGAGGCGCCGCACCGGAAGCGGTTCCGGCGGCTCAACGACTACGAGCAGGAGCGGCTGCTGATCGAGCGGGAAAAGCTGGTCACGCTGCGGGAGATACAGCGCGGCATCGAGTGCAAAAATGACATCCTGCGCGGGATACTGCACGTGCTACAGTCCAGGGTATGGCAGGCACATGCCACGGAATGAACGGGGGGTTTGGCCGGGGGGGCGGGCCGGACACACGCTTTACTGGTGTATAGTACAAAAAGGAAAATGGAACGTTAGTGGGTCGTCGTTTATTGTACGACTTCCAGCAAACACACAAAATGCGTTTGTGTGAAGCATTTTACAAAAAGAGAGATAGAGCGAGAGAGATAATAAGATGCGAACACTACGGTGG]

[+] EMBL CNS09B2J             [CCTGCTTTGCGAGTTTGCTTTATTTTGGTGCTGCCGTTTGTCCTCCCCCGCCCCACCAAAAAAACGACGACGACGACGACGACGACGACCCGCCACCCCCGGT AGGCCCCGGCCAT GGAGGAGGAAGCGGCGCTGGCAGCGGCAACGACGGCCGTGAACGCGTCCACCGCGGCGATGCTGCTGCTGAGCGGACACAGTACCTCGCACCACCTCCACCACCATCAACAGCACCAGCACGATTTCAAATGGACGCACGAGCGCTGCCTGCTGCTGCTGCACGAGTACGATCTGCTGAAGGACAAGTTTAAGGATCGCAAGCACAAAAAGAAGGACCTGTGGGCGGAGATCAGCATGAAGTTCAAGAAGATCTACGCGTACGATCTTGAGTGGGACGTTGCGTACAAAAAGTTCCGAAATCTCAAACAAACGTTCGAACAGGTGCGAGCCAAAATGCAACAGCAAGCTATTACCGGGCAGATTAGCAATCGCCCCAAGTGGGCGTACTTTGAAAAGTTCCAGCAAATACTGGACGATCCCGGCATCCCGGCGTACAGCTACGGCGATCCGGCCGCCGCAGTCCACCATCACAAGCACGAGGAGCAAGAGGAACAGGAAGACCATCATCATCATCATCATCACAACGCGCGGCACGATCATCACATACACCAGCACCACGATCACCATGCGGGGCAGCAGCACGTGGTGCACGCGCACCTTCGATCCGGCCACCGTCGGGCAGGTGCTGGCGGCCGGGGAAGACTTTACCGACACGCTCGTGACCGTGTTCCCCATGGGCGAGGAGGAAGAGGAGGAGCAGGAGCTGGAAATTCCTTCCCAACCGGTGGAAGAGAGCGGCGAGGAGGAGGAGGCGGCGGCGGCGGCGT CCGCTCGAAGGTAGAGCAGGTAGAGGAACAGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08UPV             [                                      gtctgcCCCCCGCCCCACCAAAAA    ACGACGACGACGACGACGACGACCCGCCACCCCCGGTGAGGCCCCGGCCATAGGAGGAGGAAGCGGCGCAGGCAGCGGCAACGACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09B2K             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCTGGAAATTCCTTCCCAACCGGTGGAAGAGAGCGGCGAGGAGGAGGAGGCGGCGGCGGCGGCGTCCCCCTCGAAGGTAGAACAGGTAGAGGAACAGCTCCAGGAGGTGGAGGAAGAGGAGGAACCGGTACTGCTGGAGGAGGCTGCAGAGGAGGAAGAGCTGACGGTGGAGCAGCAGCAGCAGCACCACCAGCAGCAGCTGGACGAAACGGAGGAGGCGCCGCACCGGAAGCGGTTCCGGCGGCTCAACGACTACGAGCAGGAGCGGCTGCTGATCGAGCGGGAAAAGTTGGTCACGCTGCGGGAGATACAGCGCGGCATCGAGTGCAAAAATGACATCCTGCGCGGGATACTGCACGTGCTACAGTCCAGGGTATGGCAGGCACATGCCACGGAATGAACGGGGGGTTTGGCCGGGGGGGCGGGCCGGACACACGCTTTACTGGTGTATAGTACAAAAAGGAAAATGGAACGTTAGTGGGTCGTCGTTTATTGTACGACTTCCAGCAAACACACAAAATGCGTTTGTGTGAAGCATTTTACAAAAAGAGAGATAGAGCGAGAGAGATAATAAGATGCGAACACTACGGTGG]
[-] EMBL CNS08UPW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAGCAGCAGCAGCACCACCACCAGCAGCAGCTGGACGAGACGGAGGAGGCGCCGCACCGGAAGCGCTTCCGGCGGCTCAACGACTACGAGCAGGAGCGGCTGCTGATCGAGCGGGAAAAGCTGGTCACGCTGCGGGAGATACAGCGCGGCATCGAGTGCAAAAATGACATCCTGCGCGGGATACTGCACGTGCTACAGTCCAGGGTATGGCAGGCACATGCCACGGAATGAACGGGGGGTTTGGCCGGGGGGGCGGGCCGGACACACGCTTTACTGGTGTATAGTACAAAAAGGAAAATGGAACGTTAGTGGGTCGTCGTTTATTGTACGACTTCCAGCAAACACACAAAATGCGTTTGTGTGAAGCATTTTACAAAAAGAGAGATAGAGCGAGAGAGATAATAAGATGCGAACA         ]
[+] EMBL BM590353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgGGCGGCTCAACGACTACGAGCAGGAGCGGCTGCTGATCGAGCGGGAAAAGCTGGTCACGCTGCGGGAGATACAGCGCGGCATCGAGTGCAAAAATGACATCCTGCGCGGGATACTGCACGTGCTACAGTCCAGGGTATGGCAGGCACATGCCACGGAATGAACGGGGGGTTTGGCCGGGGGGGCGGGCCGGACACACGCTTTACTGGTGTATAGTACAAAAAGGAAAATGGAACGTTAGTGGGTCGTCGTTTATTGTACGACTTCCAGCAAACACACAAAATGCGTTTGTGTGAAGCATTTTACAAAAAGAGAGATAGAGCGAGAGAGATAATAAGATGCGAACACTA      ]


>consensus_6120#0 CCTGCTTTGCGAGTTTGCTTTATTTTGGTGCTGCCGTTTGTCCTCCCCCGCCCCACCAAA AAAACGACGACGACGACGACGACGACGACCCGCCACCCCCGGTAGGCCCCGGCCATGGAG GAGGAAGCGGCGCTGGCAGCGGCAACGACGGCCGTGAACGCGTCCACCGCGGCGATGCTG CTGCTGAGCGGACACAGTACCTCGCACCACCTCCACCACCATCAACAGCACCAGCACGAT TTCAAATGGACGCACGAGCGCTGCCTGCTGCTGCTGCACGAGTACGATCTGCTGAAGGAC AAGTTTAAGGATCGCAAGCACAAAAAGAAGGACCTGTGGGCGGAGATCAGCATGAAGTTC AAGAAGATCTACGCGTACGATCTTGAGTGGGACGTTGCGTACAAAAAGTTCCGAAATCTC AAACAAACGTTCGAACAGGTGCGAGCCAAAATGCAACAGCAAGCTATTACCGGGCAGATT AGCAATCGCCCCAAGTGGGCGTACTTTGAAAAGTTCCAGCAAATACTGGACGATCCCGGC ATCCCGGCGTACAGCTACGGCGATCCGGCCGCCGCAGTCCACCATCACAAGCACGAGGAG CAAGAGGAACAGGAAGACCATCATCATCATCATCATCACAACGCGCGGCACGATCATCAC ATACACCAGCACCACGATCACCATGCGGGGCAGCAGCACGTGGTGCACGCGCACCTTCGA TCCGGCCACCGTCGGGCAGGTGCTGGCGGCCGGGGAAGACTTTACCGACACGCTCGTGAC CGTGTTCCCCATGGGCGAGGAGGAAGAGGAGGAGCAGGAGCTGGAAATTCCTTCCCAACC GGTGGAAGAGAGCGGCGAGGAGGAGGAGGCGGCGGCGGCGGCGTCCGCTCGAAGGTAGAG CAGGTAGAGGAACAGCTCCAGGAGGTGGAGGAAGAGGAGGAACCGGTACTGCTGGAGGAG GCTGCAGAGGAGGAAGAGCTGACGGTGGAGCAGCAGCAGCAGCACCACCAGCAGCAGCTG GACGAAACGGAGGAGGCGCCGCACCGGAAGCGGTTCCGGCGGCTCAACGACTACGAGCAG GAGCGGCTGCTGATCGAGCGGGAAAAGCTGGTCACGCTGCGGGAGATACAGCGCGGCATC GAGTGCAAAAATGACATCCTGCGCGGGATACTGCACGTGCTACAGTCCAGGGTATGGCAG GCACATGCCACGGAATGAACGGGGGGTTTGGCCGGGGGGGCGGGCCGGACACACGCTTTA CTGGTGTATAGTACAAAAAGGAAAATGGAACGTTAGTGGGTCGTCGTTTATTGTACGACT TCCAGCAAACACACAAAATGCGTTTGTGTGAAGCATTTTACAAAAAGAGAGATAGAGCGA GAGAGATAATAAGATGCGAACACTACGGTGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)