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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6155#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1195 fasta sequence
[CGCCCGAGGNTAACTATGAATGTTAACACAAATTGGCGGTTAGTAATCGAACCAGCAGATGGAAAATAAGATAATTCAGAAACATTAATCTCTTTTTAAACTTAATTACAGAATCAAAAACAGCTATCTTCATATAATATGATGTACACACACACACATACACTTACAAATCAAAACATTCTTTAATAACGTAACAGCACAGAATCATACGAACACGGTAATATATATTTGTTGACCCTTCATTGCAAAGTAAGCGGAACANG-ATGATCAAAATAACGATCA-TTTGAAACGGTAATTCCGAGGATTCGAATTTTATTACGATCAGAGATACCGATATGATTATGCTGGATGGCGAAACTAGACGAAAAATGCCCGTTGG-AAGATAAAATCCACAGTACCGATTTCCAGCGGCACCAAA-CAAATTCAATCCCAGCAAGCCGAA-CAAGGGGGGTTCCTTTCGCCCTCAAAAGACGCCA-CAATCAATCACTAATCGTACAACAACAAACGTTAGAAAAGTACACGTGTCCTTACAGCTCACGGGGCGACACCTCCGTACAAGACGTACAAGGGCACACGGCTGAGTGGGGCCTGTTTGAGAGATTTGGGTAGTGTTCTATAAATATACTTTAACTATATTATAACAAAAAACAAGAATTGCTGGAAAGAATCGAGCACGCGATTGTGTGTGTGCATGTATGTAATTGTGTGTTTCTGCTGTTTTAATTTCATACTTCTAATTGGAAAACGATGAACAAGTGTAGCAACAACACGATATAAAAAGATACTTATCCTTCTCTCTATGCTAAAACCTGCACGGAATATAGATGTGAAAGAAGAAAAGGAAATGGGGTTCTAGGACCTAGTTACTATCTACTATTACTACCACTACAACCGATTCGTATGCACGATTCCTAACCCTGCAGCAGCACACATTCGGAAGGTTTCAAAACTACTACTCTCGTCCCTTTTTTCTGTACACACCTGTATCTCGAATCATCTCAGCAAACTGTTTTCCTAACTTTTCCATGTTTCCACACTAAATCGTGACCTCAAACACGTGCTCGCTACGTAGAAAGAGAGAGAGATAGAGAGATAGACAGAGTGGCATGCCTTTTTAGGAGCAGAAGCGATCAACTCTCACACACTGTGTCTGTTAGTAGAAATCCACTGTCCTAGATGTAGATTATATGCATTA]
[+] EMBL AL695654 [CGCCCGAGGNTAACTATGAATGTTAACACAAATTGGCGGTTAGTAATCGAACCAGCAGATGGAAAATAAGATAATTCAGAAACATTAATCTCTTTTTAAACTTAATTACAGAATCAAAAACAGCTATCTTCATATAATATGATGTACACACACACACATACACTTACAAATCAAAACATTCTTTAATAACGTAACAGCACAGAATCATACGAACACGGTAATATATATTTGTTGACCCTTCATTGCAAAGTAAGCGGAACANGCATGATCAAAATAACGATCA TTTGAAACGGTAATTCCGAGGATTCGAATTTTATTACGATCAGAGATACCGATATGATTATGCTGGATGGCGAAACTAGACGAAAAATGCCCGTTGGCAAGATAAAATCCACAGTACCGATTTCCAGCGGCACCAAAGCAAATTCAATCCCAGCAAGCCGAACCAAGGGGGGTTCCTTTCGCCCTCAAAAGACGCCACCAATCAATCACTAATCG ]
[+] EMBL BX610051 [ TCATTGCAAAGTAAGCGGAAAAAG ATGATCAAAATAACGATCATTTTGAAACGGTAATTCCGAGGATTCGAATTTTATTACGATCAGAGATACCGATATGATTATGCTGGATGGCGAAACTAGACGAAAAATGCCCGTTGG AAGATAAAATCCACAGTACCGATTTCCAGCGGCACCAAA CAAATTCAATCCCAGCAAGCCGAA AAAGGGGGGTTCCTTTCGCCCTCAAAAGACGCCA CAATCAATCACTAATCGTACAACAACAAACGTTAGAAAAGTACACGTGTCCTTACAGCTCACGGGGCGACACCTCCGTACAAGACGTACAAGGGCACACGGCTGAGTGGGGCCTGTTTGAGAGATTTGGGTAGTGTTCTATAAATATACTTTAACTATATTATAACAAAAAACAAGAATTGCTGGAAAGAATCGAGCACGCGATTGTGTGTGTGCATGTATGTAATTGTGTGTTTCTGCTGTTTTAATTTCATACTTCTAATTGGAAAACGATGAACAAGTGTAGCAACAACACGATATAAAAAGATACTTATCCTTCTCTCTATGCTAAAACCTGCACGGAATATAGATGTGAAAGAAGAAAAGGAAATGGGGTTCTAGGACCTAGTTACTATCTACTATTACTACCACTACAAC ]
[+] EMBL BX609415 [ CTGTTTGAGAGATTTGGGTAGTGTTCTATAAATATACTTTAACTATATTATAACAAAAAACAAGAATTGCTGGAAAGAATCGAGCACGCGATTGTGTGTGTGCATGTATGTAATTGTGTGTTTCTGCTGTTTTAATTTCATACTTCTAATTGGAAAACGATGAACAAGTGTAGCAACAACACGATATAAAAAGATACTTATCCTTCTCTCTATGCTAAAACCTGCACGGAATATAGATGTGAAAGAAGAAAAGGAAATGGGGTTCTAGGACCTAGTTACTATCTACTATTACTACCACTACAACCGATTCGTATGCACGATTCCTAACCCTGCAGCAGCACACATTCGGAAGGTTTCAAAACTACTACTCTCGTCCCTTTTTTCTGTACACACCTGTATCTCGAATCATCTCAGCAAACTGTTTTCCTAACTTTTCCATGTTTCCACACTAAATCGTGACCTCAAACACGTGCTCGCTACGTAGAAAGAGAGAGAGATAGAGAGATAGACAGAGTGGCATGCCTTTTTAGGAGCAGAAGCGATCAACTCTCACACACTGTGTCTGTTAGTAGAAATCCACTGTCCTAGATGTAGATTATATGCATTA]
[+] EMBL AGA283111 [ CTAATTGGAAAACGATGAACAAGTGTAGCAACAACACGATATAAAAAGATACTTATCCTTCTCTCTATGCTAAAACCTGCACGGAATATAGATGTNAAAGAAGAAAAGGAAATGGGGTTCTAGGACCTAGTTACTATCTACTATTACTACCACTACAACCGATTCGTATGCACGATTCCTAACCCTGCAGCAGCACANATTCGGAAGGTTTCAAAACTACTACTCTCGTCCCTTTTTTCTGTACACACCTGTATYTCGAATCATCTNAGCAAACTGTTTTCCTAACTTTTCCATGTTTCCACACTAAATCGTGANCTCAAACACGTGCTCGCTACGTAGA ]
consensusID : consensus_6155#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 749 fasta sequence
[ATGCAGAATACCCGCGGTTTGTTTTAATTTCATACTTCTACTTGGAAAACGATGANCAAGTGTAGCAACAACACGATATAAAAGAGATACTTATACCTATCTCTCTATAGCTAAAACCTGCACGGAATATAGATAGTAGAAAGAAGNACAAGGCAATGGGGTTCTAGGACGCTAAAGATATAACATATACTAAACTATATANTTAAGCCCAANCTAAAGCAANACCCNGGACTATCCGTTACATTAGCAAGGGAATNAACCTNAAAAACCACATTGACANGGACGCGGNAGGCACATATACCAGGACANACGNGNNTATACTCACACAGACAGTTAAACATNAACCTAANTCGGAGACGCCAGAGAGTATGAACANAAGGTCAGCACAACAAACGTAGGNAAAGTACCGACNGGGAANTCCCATCCNATCNGNCGAGAAGAGTATGGTNAGANAGTTAGCCCCGTTAAAAGGGGTTNTGANTGCGCGGNTGGNGNGTATANATCGCNATNGCCTTANAGGCAATCAGAGANANGGGAAGNGCGTNAGCNAGGGAACGAAGANGGGANTGAGACTANCNACCGNTNANNGGNGTAAGGACNAGAAGGGCAGGGAGGGCGGGGNGTCGACAGCAAGCGGGGCAGGGGNGGNAGTGCGGGGGGGGGAAGGGGATNGGGCAGGAACAGNGAGNCATGAANNGAGAGGGGGNNCAGTGNAAGGGGGCAANGGGGNGNGAGTNNNCGNAGGTGGG]
[+] EMBL AL695409 [ATGCAGAATACCCGCGGTTTGTTTTAATTTCATACTTCTACTTGGAAAACGATGANCAAGTGTAGCAACAACACGATATAAAAGAGATACTTATACCTATCTCTCTATAGCTAAAACCTGCACGGAATATAGATAGTAGAAAGAAGNACAAGGCAATGGGGTTCTAGGACGCTAAAGATATAACATATACTAAACTATATANTTAAGCCCAANCTAAAGCAANACCCNGGACTATCCGTTACATTAGCAAGGGAATNAACCTNAAAAACCACATTGACANGGACGCGGNAGGCACATATACCAGGACANACGNGNNTATACTCACACAGACAGTTAAACATNAACCTAANTCGGAGACGCCAGAGAGTATGAACANAAGGTCAGCACAACAAACGTAGGNAAAGTACCGACNGGGAANTCCCATCCNATCNGNCGAGAAGAGTATGGTNAGANAGTTAGCCCCGTTAAAAGGGGTTNTGANTGCGCGGNTGGNGNGTATANATCGCNATNGCCTTANAGGCAATCAGAGANANGGGAAGNGCGTNAGCNAGGGAACGAAGANGGGANTGAGACTANCNACCGNTNANNGGNGTAAGGACNAGAAGGGCAGGGAGGGCGGGGNGTCGACAGCAAGCGGGGCAGGGGNGGNAGTGCGGGGGGGGGAAGGGGATNGGGCAGGAACAGNGAGNCATGAANNGAGAGGGGGNNCAGTGNAAGGGGGCAANGGGGNGNGAGTNNNCGNAGGTGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6155#0 CGCCCGAGGNTAACTATGAATGTTAACACAAATTGGCGGTTAGTAATCGAACCAGCAGAT 60
consensus_6155#1 ----------------------------------------------------------AT 2
**
consensus_6155#0 GGAAAATAAGATAATTCAGAAACATTAATCTCTT-TTTAAACTTAATTACAGAATCAAAA 119
consensus_6155#1 GCAGAATACCCGCGGTTTG---TTTTAATTTCATACTTCTACTTGGAAA-ACGATGANCA 58
* * **** * * ***** ** * ** **** * * ** * *
consensus_6155#0 ACAGCTATCTTCATATAATATGATGTACACACACACACATACACTTACA-AATCAAAACA 178
consensus_6155#1 AGTGTAGCAACAACACGATATAAAAGAGATACTTATACCTATCTCTCTATAGCTAAAACC 118
* * * * **** * * * ** * ** ** * * * *****
consensus_6155#0 TTCTTTAATAACGTAACAGCACAGAATCATACGAACACGGTAATATATATTTGTTGACCC 238
consensus_6155#1 TGCACGGAATATA-GATAGTAGAAAG----AAGNACAAGGCAATGGGGTTCTAGGACGCT 173
* * * * * ** * * * * * *** ** *** * * *
consensus_6155#0 TTCATTGCAAAGTAAGCGGAACANGATGATCAAAATAACGATCATTTGAAACGGTAATTC 298
consensus_6155#1 AAAGATATAACATATACTAAACTATATANTTAAGCCCA-----ANCTAAAGCAANACCCN 228
* ** ** * *** ** * ** * * * ** * *
consensus_6155#0 CGAGGATTCGAATTTTATTACGATCAGAGATACCGATATGATTATGCTGGATGGCGAAAC 358
consensus_6155#1 GGACTATCCG--TTACATT---AGCAAGGGAATNAACCTNAAAAACCACATTGACANGG- 282
** ** ** ** *** * ** * * * * * * * ** *
consensus_6155#0 TAGACGAAAAATGCCCGTTGGAAGATAAAATCCACAGTACCGATTTCCAGCGGCACCAAA 418
consensus_6155#1 -ACGCGGNAGGCACATATACCAGGACANACGNGNNTATACTCACA-CAGACAGTTAAACA 340
* ** * * * * ** * * *** * * * * * *
consensus_6155#0 CAAATTCAATCCCAGCAAGCCGAACAAGGGGGGTTCCTTTCGCCCTCAAAAGACGCCACA 478
consensus_6155#1 TNAACCTAANTCGGAGACGCCAGAGAGTATGAACANAAGGTCAGCACAACAAACGTAGGN 400
** ** * * *** * * * * *** * ***
consensus_6155#0 ATCAATCACTAATCGTACAACAACAAACGTTAGAAAAGTACACGTGTCCTTACAGCTCAC 538
consensus_6155#1 A--AAGTACCGACNGGGAANTCCCATCCNATCNGNCGAGAAGAGTATGGTNA-------- 450
* ** ** * * * ** * * * ** * * *
consensus_6155#0 GGGGCGACACCTCCGTACAAGACGTACAAGGGCACACGGCTGAGTGGGGCCTGTTTGAGA 598
consensus_6155#1 -GANAGTTAGCCCCGTTAAAAGGGGTTNTGANTGCGCGGNTGGNGNGTATANATCGCNAT 509
* * * * **** ** * * * *** ** * *
consensus_6155#0 GATTTGGGTAGTGTTCTATAAATATACTTTAACTATATTATAACAAAAAACAAGAATTGC 658
consensus_6155#1 NGCCTTANAGGCAATC---AGAGANANGGGAAGNGCGTNAGCNAGGGAACGAAGANGGGA 566
* * ** * * * * ** * * ** **** *
consensus_6155#0 TGGAAAGAATCGAGCACGCGATTGTGTGTGTGCATGTATGTAATTGTGTGTTTCTGCTGT 718
consensus_6155#1 NTGAGACTANCNACCGNTNANNGGNGTAAGGACNAGAAGGGCAGGGAGGG----CGGGGN 622
** * * * * * * ** * * * * * * * * * * *
consensus_6155#0 TTTAATTTCATACTTCTAATTGGAAAACGATGAACAAGTGTAGCAACAACACGATATAAA 778
consensus_6155#1 GTCGACAGCAAGCGGGGCAG-GGGNGGNAGTGCGGGGGGGGGAAGGGGATNGGGCAGGAA 681
* * ** * * ** ** * * * * * **
consensus_6155#0 AAGATACTTATCCTTCTCTCTATGCTAAAACCTGCACGGAATATAGATGTGAAAGAAGAA 838
consensus_6155#1 CAGNGAGNCATGAANNGAGAGGGGGNNCAG--TGNAAGGGG-GCAANGGGGNGNGAGTNN 738
** * ** * * ** * ** * * * **
consensus_6155#0 AAGGAAATGGGGTTCTAGGACCTAGTTACTATCTACTATTACTACCACTACAACCGATTC 898
consensus_6155#1 NCGNAGGTGGG------------------------------------------------- 749
* * ****
consensus_6155#0 GTATGCACGATTCCTAACCCTGCAGCAGCACACATTCGGAAGGTTTCAAAACTACTACTC 958
consensus_6155#1 ------------------------------------------------------------
consensus_6155#0 TCGTCCCTTTTTTCTGTACACACCTGTATCTCGAATCATCTCAGCAAACTGTTTTCCTAA 1018
consensus_6155#1 ------------------------------------------------------------
consensus_6155#0 CTTTTCCATGTTTCCACACTAAATCGTGACCTCAAACACGTGCTCGCTACGTAGAAAGAG 1078
consensus_6155#1 ------------------------------------------------------------
consensus_6155#0 AGAGAGATAGAGAGATAGACAGAGTGGCATGCCTTTTTAGGAGCAGAAGCGATCAACTCT 1138
consensus_6155#1 ------------------------------------------------------------
consensus_6155#0 CACACACTGTGTCTGTTAGTAGAAATCCACTGTCCTAGATGTAGATTATATGCATTA 1195
consensus_6155#1 ---------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||