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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6353#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1132 fasta sequence
[ATGGTAGGCAAACTAAAGCTGGCCATGGCGCTGCAAGAACGGAAGGGACGAAAACAACATCTAAACGGTAAAGGAAGGAGCACGATACAGTAAAAATATGCCAGAAGAGGAGGAAATAGAAGTATATGTTTTGCAGCTGCAGCACACATGCTGAAACAGGCAGAGAGAAAGAACCGACAGCAAAGCAGAGGAGTAAGCATTTACTCAGGCAGCAATATTCCTATAGACTTACTAATTAATTCTTCAAGATGTTGTTTTCTTGGCCTCAAAAACTGCCTCTACTACACAGGGGTTTTAGGAATGGAACGGCTTTACTCTCGTCTTACTTGGGCTTTTCGTTGTTGGGCTCAGTTCCTTCGTGTACTTTCACGTAGCAAATTATTCCTTCACTAAAGTCTTTCAGTCTTTTGAGTTTAATTTTCTTTTTTTAAGTTTATAGATTGCACTAATTAGGAATTTTTAAAAATTCTATTACTTTCATCATTGATTCAGTTTGGTAGCTTATTTGTTCTGCCCTAAAGTTCGCTTGATGGTAGGAACGTTCAAGGTTTAATTAGTGAGCAGCTCGATCTTAACGCAATGAATGTGCAAGCATTTATTGAGAAAAGTGGTAAGGGCTCACGAACGAAGAATTCACAGACAAACACGAGGAGCGCAAGCAAAAGAAGAGAATTAAAATGGTTTCAGATGGATTTGCACTTCGGCGAACTGTCGCCGTGCAAAGCCCTTCCATGCCTGTTTGAGGTGAAACAGTAAAGAAATCTGACACAGTACATGATGATACACTTGAGAAGTAATGAGAATTATATTATATGAATCGAATATTGTTATTAAAATGTAAAAGCCCCACCGCAAAGCGCCCCAGCCGGATGGACAAAGGATGGAGACGTCTGCAAGGCACTGGCACTTGGTGGAGGCGCATACAAATGCGCGGTAGGGTGTGGTGCGGATGTTATCGTTCATCCCTCCCATGATCGACCCATCCCCTCAGATCGAGCCCCGAGCATCGACACGCTATGTGAAAGTATAGATATCAATTATATTGCATCTTTCAAACGATTCCTTCGATGGTGCCTCTAACAGCAGCTTCTGTAGCACGACGTCAACGACGCCGGGACAAACCACCGAAACG]
[+] EMBL BX624911 [ATGGTAGGCAAACTAAAGCTGGCCATGGCGCTGCAAGAACGGAAGGGACGAAAACAACATCTAAACGGTAAAGGAAGGAGCACGATACAGTAAAAATATGCCAGAAGAGGAGGAAATAGAAGTATATGTTTTGCAGCTGCAGCACACATGCTGAAACAGGCAGAGAGAAAGAACCGACAGCAAAGCAGAGGAGTAAGCATTTACTCAGGCAGCAATATTCCTATAGACTTACTAATTAATTCTTCAAGATGTTGTTTTCTTGGCCTCAAAAACTGCCTCTACTACACAGGGGTTTTAGGAATGGAACGGCTTTACTCTCGTCTTACTTGGGCTTTTCGTTGTTGGGCTCAGTTCCTTCGTGTACTTTCACGTAGCAAATTATTCCTTCACTAAAGTCTTTCAGTCTTTTGAGTTTAATTTTCTTTTTTTAAGTTTATAGATTGCACTAATTAGGAATTTTTAAAAATTCTATTACTTTCATCATTGATTCAGTTTGGTAGCTTATTTGTTCTGCCCTAAAGTTCGCTTGATGGGAGGAACGTTCAAGGTTTAATTAGTGAGCAGCTCGATCTTAACGCAATGAATGTGCAAGCATTTATTGAGAAAAGTGATAAGGGCTTACGAACGAAGAATTCACAGACAGACACGAGGAGCGCAAGCAAAAGAAGAGAATTAAAATGGTTTCAGATGGATTTGCACTTCGGCGA ]
[+] EMBL BX613877 [ GCCCTACAGTTTGCTTGATGGTAGGAACGTTCAAGGTTTAATTAGTGAGCAGCTCGATCTTAACGCAATGAATGTGCAAGCATTTATTGAGAAAAGTGGTAAGGGCTCACGAACGAAGAATTCACAGACAAACACGAGGAGCGCAAGC ]
[+] EMBL BX608027 [ TAGGAACGTTCAAGGTTTAATTAGTGAGCAGCTCGATCTTAACGCAATGAATGTGCAAGCATTTATTGAGAAAAGTGGTAAGGGCTCACGAACGAAGAATTCACAGACAAACACGAGGAGCGCAAGCAACAGAAGAGAATTAAAATGTTTTCAGATGGATTAGTACTTCGGCGAACTGTCGCCGTGCAAAGCCCTTCCATGCCTGTTTGAGGTGAAACAGTAAAGAAATCTGACACAGTACATGATGATACACTTGAGAAGTAATGAGAATTATATTATATGAATCGAATATTGTTATTAAAATGTAAAAGCCCCACCGCAAAGCGCCCCAGCCGGATGGACAAAGGATGGAGACGTCTGCAAGGCACTGGCACTTGGTGGAGGCGCATACAAATGCGCGGTAGGGTGTGGTGCGGATGTTATCGTTCATCCCTCCCATGATCGACCCATCCCCTCAGATCGAGCCCCGAGCATCGACACGCTATGTGAAAGTATAGATATCAATTATATTGCATCTTTCAAACGATTCCTTCGATGGTGCCTCTAACAGCAGCTTCTGTAGCACGACGTCAACGACGCCGGGACAAACCACCGAAACG]
consensusID : consensus_6353#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 827 fasta sequence
[CGACCCACGCGTCCGGCTAGGCATGTGAGACGGAAGCAGCTTACCCAGTACCTCGATCCCAATCTGCTGAAGCGCGAACGAAAGATCTCGGACAGCTACGCACAGTCCAGCAGCAGCAGCGGCGGCACGGCCAGTGCCAGTGGCAATTCCAACGGTTCGGCGTCACCAGCGGATGCTGGTTCACGTAAACGAAAATCAAGCGATCTGGCGAGCTCTTTGACCAGTCCCGTCGCTGCATCGCCGGCGGGCAGCAATGGCAGCGCGAGTAAAAAGCGACGCAACGATTCCTTCGATGGTGCCTCTAACAGCAGCTTCTGTAGCACGACGTCGACGACGCCCGGACAAACCACCGAAACGCAAAGCATGGAAGGGAACGAAACGACCACTACCACCACCACCACCACCACCACAGCCGTGTCCAACACTGCCACCGTCCCGGGCGACACCGGTACACTGTCCACCTCCTCCGCCGCATCCTCTTCGCCGGCGAACGGCGAAAGGGATGAAAGTGCTGCCCCTTCGAGCTCTGCCGAGGAGCCACCGTCCAGTGCCGAAGGCGGCATGCTCGATGACGAGAGCTGCTCGTTCGATCCGGCGACCGCGGCGGCCTCCAACCCCAACGGCAATCCACATAACAGCACCAACAACAGCAACAGCGGTAGCGGTAGTAACGACAGTAGTAATGGTAACAGTTCGGCACCGGCTGCGTCCGCAGCCGAGGTCGCCTGCTCTTGACTGACTCATCGCCAAGCGATGTTCCGCAATGGAGAACCGCCGTCCCCTGCCGCTGGGGGGCGGTCTTCGATTACTGATGCTGGTGATGGTAG]
[+] EMBL BM650578 [CGACCCACGCGTCCGGCTAGGCATGTGAGACGGAAGCAGCTTACCCAGTACCTCGATCCCAATCTGCTGAAGCGCGAACGAAAGATCTCGGACAGCTACGCACAGTCCAGCAGCAGCAGCGGCGGCACGGCCAGTGCCAGTGGCAATTCCAACGGTTCGGCGTCACCAGCGGATGCTGGTTCACGTAAACGAAAATCAAGCGATCTGGCGAGCTCTTTGACCAGTCCCGTCGCTGCATCGCCGGCGGGCAGCAATGGCAGCGCGAGTAAAAAGCGACGCAACGATTCCTTCGATGGTGCCTCTAACAGCAGCTTCTGTAGCACGACGTCGACGACGCCCGGACAAACCACCGAAACGCAAAGCATGGAAGGGAACGAAACGACCACTACCACCACCACCACCACCACCACAGCCGTGTCCAACACTGCCACCGTCCCGGGCGACACCGGTACACTGTCCACCTCCTCCGCCGCATCCTCTTCGCCGGCGAACGGCGAAAGGGATGAAAGTGCTGCCCCTTCGAGCTCTGCCGAGGAGCCACCGTCCAGTGCCGAAGGCGGCATGCTCGATGACGAGAGCTGCTCGTTCGATCCGGCGACCGCGGCGGCCTCCAACCCCAACGGCAATCCACATAACAGCACCAA ]
[+] EMBL BX606751 [ CCACCACCACAGCCGTGTCCAACACTGCCACCGTCCCGGGCGACACCGGTACACTGTCCACCTCCTCCGCCACATCCTCTTCGCCGGCGAACGGCGAAAGGGATGAAAGTGCTGCCCCTTCGAGCTCTGCCGAGGAGCCACCGTCCAGTGCCGAAGGCGGCATGCTCGATGATGAGAGCTGCTCGTTCGATCCGGCGACC GCGGCCTCCAACCCCAACGGCAATCCACATAACAGCACCAACAACAGCAACAGCGGTAGCGGTAGTAACGACAGTAGTAATGGTAACAGTTCGGCACCGGCTGCGTCCGCAGCCGAGGTCGCCTGCTCTTGACTGACTCATCGCCAAGCGATGTTCCGCAATGGAGAACCGCCGTCCCCTGCCGCTGGGGGGCGGTCTTCGATTACTGATGCTGGTGATGGTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6353#0 ATGGTAGGCAAACTAAAGCTGGCCATGGCGCTGCAAGAACGGAAGGGACGAAAACAACAT 60
consensus_6353#1 -----CGACCCAC-GCGTCCGGCTA-GGCA-TGTGAGA-CGGAAGCAGCTTACCCAGTAC 51
* * ** * *** * *** ** *** ****** * * ** *
consensus_6353#0 CTAAACGGTAAAG-GAAGGAGCACGATACAGTAAAAATATGCCAGAAGAGGAGGAAATAG 119
consensus_6353#1 CTCGATCCCAATCTGCTGAAGCGCGA-ACGAAAGATCTCGGACAGCTACGCACAGTCCAG 110
** * ** * * *** *** ** * * * * *** * * **
consensus_6353#0 AAGTATATGTTTTGCAGCTGCAGCACACATGCTGAAACAGGCAGAGAGAAAGAACCGACA 179
consensus_6353#1 CAGCA--------GCAGCGGCGGCACGGCCAGTGCCAGTGGCAATTCCAACGGTTCGGCG 162
** * ***** ** **** ** * **** ** * ** *
consensus_6353#0 GCAAAGCAGAGGAGTAAGCATTTACTCAGGCAGCAATATTCCTATAGACTTACTAATTAA 239
consensus_6353#1 TCAC--CAGCGGA-TGCTGGTTCACGTAAACGAAAAT-------CAAGCGATCTGGCGAG 212
** *** *** * ** ** * * *** * * ** *
consensus_6353#0 TTCTTCAAGATGTTGTTTTCTTGGCCTCAAAAACTGCCTCTACTACACAGGGGTTTTAGG 299
consensus_6353#1 CTCTTTGA----CCAGTCCCGTCGCTGCATCGCCGGCGGGCAGCA-ATGGCAGCGCGAGT 267
**** * * * * ** ** * ** * * * * * **
consensus_6353#0 AATGGAACGGCTTTACTCTCGTCTTACTTGGGCTTTTCGTTGTTGGGCTCAGTTCCTTCG 359
consensus_6353#1 AA-AAAGCGACGCAACGATTCCTTCGATGGTGCCTCTAACAGC-AGCTTCTGTAGCACGA 325
** * ** * ** * * * * ** * * * * ** ** *
consensus_6353#0 TGT--ACTTTCACGTAGCAAATTATTCCTTCACTAAAGTCTTTCAGTCTTTTGAGTTTAA 417
consensus_6353#1 CGTCGACGACGCCCGGACAAACCACCGAAACGC-AAAGCATGGAAG------GGAACGAA 378
** ** * **** * * * **** * ** * **
consensus_6353#0 TTTTCTTTTTTTAAGTTTATAGATTGCACTAATTAGGAATTTTTAAAAATTCTATTACTT 477
consensus_6353#1 ACGACCACTACCACCACCACCACCACCACCA--CAGCCGTGTCCAACA---CTGCCACCG 433
* * * * *** * ** * * ** * ** **
consensus_6353#0 TCATCATTGATTCAGTTTGGTAGCTTATTTGTTCTGCCCTAAAGTTCGCTTGATGGTAGG 537
consensus_6353#1 TCCCGGGCGACACCGGTACACTGTCCACCTCCTCCGCCGCA---TCCTCTTCGCCGGCGA 490
** ** * * * * * * ** *** * * * *** * *
consensus_6353#0 AACGTTCAAGGTTTAATTAGTGAGCAGCTCGATCTTAACGCAATGAATGTGCAAGCATTT 597
consensus_6353#1 ACGGCGAAAGG---GATGAAAGTGCTGCCCC-TTCGAGCTCTGCCGAGGAGCCACCGTCC 546
* * **** ** * * ** ** * * * * * * * ** * * *
consensus_6353#0 ATTGAGAAAAGTGGTAAGGGCTCACGAACGAAGAATTCACAGACAAACACGAGGAGCGCA 657
consensus_6353#1 AGTGCCGAAGGCGGCATG--CTCGATGACGAGAGCTGCTCGTTCGATC-CGGCGACCGCG 603
* ** ** * ** * * *** **** * * * * * * ** ** ***
consensus_6353#0 AGCAAAAGAAGAGAATTAAAATGGTTTCAGATGGATTTGCACTTCGGCGAACTGTCGCCG 717
consensus_6353#1 ----------GCGGCCTCCAAC----CCCAACGGCAATCCACATAACAGCACCAACAACA 649
* * * ** * * ** * *** * * ** * *
consensus_6353#0 TGCAAAGCCCTTCCATGCCTGTTTGAGGTGAAACAGTAAAGAAATCTGACACAGTACATG 777
consensus_6353#1 -GCAA----CAGCGGTAGCGGTAGTAACGACAGTAGTAATGGTAAC-AGTTCGGCACCGG 703
**** * * * * ** * * ***** * * * * * ** *
consensus_6353#0 ATG-ATACACTTGAGAAGTAATGAGAATTATATTATATGA--ATCGAATATTGTTATTAA 834
consensus_6353#1 CTGCGTCCGCAGCCGAGGTCGCCTGCTCTTGACTGACTCATCGCCAAGCGATGTT-CCGC 762
** * * * ** ** * * * * * * * * ****
consensus_6353#0 AATGTAAAAGCCCCACCGCAAAGCGCCCCAGCCGGATGGACAAAGGATGGAGACGTCTGC 894
consensus_6353#1 AATGGAGAA---CCGCCGTCCCCTGCCGCTGGGGGGCGGTCTTCGATTACTGATGCTGGT 819
**** * ** ** *** *** * * ** ** * * * ** * *
consensus_6353#0 AA-GGCACTGGCACTTGGTGGAGGCGCATACAAATGCGCGGTAGGGTGTGGTGCGGATGT 953
consensus_6353#1 GATGGTAG---------------------------------------------------- 827
* ** *
consensus_6353#0 TATCGTTCATCCCTCCCATGATCGACCCATCCCCTCAGATCGAGCCCCGAGCATCGACAC 1013
consensus_6353#1 ------------------------------------------------------------
consensus_6353#0 GCTATGTGAAAGTATAGATATCAATTATATTGCATCTTTCAAACGATTCCTTCGATGGTG 1073
consensus_6353#1 ------------------------------------------------------------
consensus_6353#0 CCTCTAACAGCAGCTTCTGTAGCACGACGTCAACGACGCCGGGACAAACCACCGAAACG 1132
consensus_6353#1 -----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||