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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6450#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1257 fasta sequence
[CCGCCCACGCGTCCGCAACGGCAAACTCGGCCGGTACAACATCAAAGAGCGAACAAAGGCCATGGTAGCGTGTTATCCTGGTTCCGGTTCGCATTACGTGAAGCACGTCGACAATCCCAACCGTGACGGGCGCTGCATTACCGCCATCTACTATCTCAATCTCGACTGGGACGTGCGGAAAAGTGGCGGTCTGTTAAGGATTTTCCCCGAGGGATGCAACGATCGGGTGGCTGACATCGAGCCCATCTTTGATCGCATTCTGTTCTTCTGGTCCGACCGGCGGAACCCGCACGAGGTGCAGCCGGCCCACCGCACCCGGTACGCCATCACGCTCTGGTATCTCGATGCGGAGGAGCGCGAGTCGGCCCGGTTGCGCTACCAGCGGGACTGCGAGAATCGCTTTAACAGCAAGGCCTAGTCGGGGTCGGGTCTCGGGTCGAAAGAGGAGCGAGAGCACATGCGCAAACGGTGGTGCAAGAGGGAAAGAGCGACCAGTCAGACCAGACAGACAGACAGACAGACAGACAGGG-ACAGGAGGATCGGTGGTTCGTGGTTTACTGGATCTGTTCCCGGTGATGCGCGGTTGCTCTCGCGTTCGTACCAAATCGAATAATTTATTAGCAAAAAGCAAAACCTTGTTATCCAAATGTGATATAACTATACGTGTGGGTGTGTATGTGTGTGTGTGTGCATGAGGTTTAGTGGACAGGACTTACGTACAGTGTTTTACGTACTTGCACACATTGTGCGTTAAAATACAATGAGAGCAGTATGCATTAGAATGGTAGAGAAAGTAAGTAAGATAAAGCAACGACCGCGCAGCCTAGGCCAAGGAGAGGAGGTGAATATGTTTTGCAATCGTATTTGCAGTGTAAATAGCAGCAGATGGGCAAAAGTACAGGAGCACTTAACACAAAGAATCGGTGCAGCGGGGATGTCAGTGATGATCNGATATTGGGTTNCGGCAATGTTGATCGGTTTCATTAGCTAGCAAAATTGTTTAAATGTTTTTTTCCCCGCGGGTACTTTTGACGTGCTTGGCGCAGGGCAACGAAAAGAAGAACAAAAACAAGCAGGAGTAATTGGCGGAATTTGGCTGCTACACTGTAGAAAAGGATTGTTTGTATTGTACTTGTACTAATGCATAAGAAATGGGGTGAAAGGAGCATCATACATCTTGTTTGTACGAATGAACGGGAACGGGAAATAGTGGGAAACAGAAACAAATACACACAAACACACACACACACACTCCCA]
[+] EMBL BM636292 [CCGCCCACGCGTCCGCAACGGCAAACTCGGCCGGTACAACATCAAAGAGCGAACAAAGGCCATGGTAGCGTGTTATCCTGGTTCCGGTTCGCATTACGTGAAGCACGTCGACAATCCCAACCGTGACGGGCGCTGCATTACCGCCATCTACTATCTCAATCTCGACTGGGACGTGCGGAAAAGTGGCGGTCTGTTAAGGATTTTCCCCGAGGGATGCAACGATCGGGTGGCTGACATCGAGCCCATCTTTGATCGCATTCTGTTCTTCTGGTCCGACCGGCGGAACCCGCACGAGGTGCAGCCGGCCCACCGCACCCGGTACGCCATCACGCTCTGGTATCTCGATGCGGAGGAGCGCGAGTCGGCCCGGTTGCGCTACCAGCGGGACTGCGAGAATCGCTTTAACAGCAAGGCCTAGTCGGGGTCGGGTCTCGGGTCGAAAGAGGAGCGAGAGCACATGCGCAAACGGTGGTGCAAGAGGGAAAGAGCGACCAGTCAGACCAGACAGACAGACAGACAGACAGACAGGGCACAGGAGGATCGGTGGTTCGTGGTTTACTGGATCTGTTCCCGGTGATGCGCGGTTGCTCTCGCGTTCGTACCAAATCGAATAATTTAT ]
[+] EMBL BX618821 [ TCGGCCCGGTTGCGCTACCAGCGGGACTGCGAGAATCGCTTTAACAGCAAGGCCTAGTCGGGGTCGGGTCTCGGGTCGAAAGAGGAGCGAGAGCACATGCGCAAACGGTGGTGCAAGAGGGAAAGAGCGACCAGTCAGACCAGACAGACAGACAGACAGACAGACAGGG ACAGGAGGATCGGTGGTTCGTGGTTTACTGGATCTGTTCCCGGTGATGCGCGGTTGCTCTCTCGTTCGTACCAAATCGAATAATTTATTAGCAAAAAGCAAAACCTTGTTATCCAAATGTGATATAACTATACGTGTGGGTGTGTATGTGTGTGTGTGTGCATGAGGTTTAGTGGACAGGACTTACGTACAGTGTTTTACGTACTTGCACACATTGTGCGTTAAAATACAATGAGAGCAGTATGCATTAGAATGGTAGAGAAAGTAAGTAAGATAAAGCAACGACCGCGCAGCCTAGGCCAAGGAGAGGAGGTGAATATGTTTTGCAATCGTATTTGCAGTGTAAATAGCAGCAGATGGGCAAAAGTACAGGAGCACTTA ]
[+] EMBL BX619516 [ GAGAATCGCTTTAACAGCAAGGCCTAGTCGGGGTCGGGTCTCGGGTCGAAAGAGGAGCGAGAGCACATGCGCAAACGGTGGTGCAAGAGGGAAAGAGCGACCAGTCAGACCAGACAGACAGACAGACAGACAGACAGGG ACAGGAGGATCGGTGGTTCGTGGTTTACTGGATCTGTTCCCGGTGATGCGCGGTTGCTCTCGCGTTCGTACCAAATCGAATAATTTATTAGCAAAAAGCAAAACCTTGTTATCCAAATGTGATATAACTATACGTGTGGGTGTGTATGTGTGTGTGTGTGCATGAGGTTTAGTGGACAGGACTTACGTACAGTGTTTTACGTACTTGCACACATTGTGCGTTAAAATACAATGAGAGCAGTATGCATTAGAATGGTAGAGAAAGTAAGTAAGATAAAGCAACGACCGCGCAGCCTAGGCCAAGGAGAGGAGGTGAATATGGTTTGCAATCGTATTTGCAGTGTAAATAGCAGCAGATGGNNAAAAGTACANGAGCACTTAACACAAAGAATCGGTGCAGCGGGGATGTCAGTGATGATCNGATATTGGGTTN ]
[+] EMBL BX615767 [ GTTCGTACCAAATCGAATAATTTATTAGCAAAAAGCAAAACCTTGTTATCCAAATGTGTTATAACTATACGTGTGGGTGTGTATGTGTGTGTGTGTGCATGAGGTTTAGTGGACAGGACTTACGTACAGTGTTTTACGTACTTGCACACATTGTGCGTTAAAATACAATGAGAGCAGTATGCATTAGAATGGTAGAGAAAGTAAGTAAGATAAAGCAACGACCGCGCAGCCTAGGCCAAGGAGAGGAGGTGAATATGTTTTGCAATCGTATTTGCAGTGTAAATAGCAGCAGATGGGCAAAAGTACAGGAGCACTTAACACAAAGAATCGGTGCAGC GGGATGTCAGTGATGATCGGATATTGGTTTACGGCAATGTTGATCGGTTTCATTAGCTAGCAAAATTGTTTAAATGTTTTTTTCCCCGCGGGTACTTTTGACGTGCTTGGCGCAGGGCAACGAAAAGAAGAACAAAAACAAGCAGGAGTAATTGGCGGAATTTGGCTGCTACACTGTAGAAAAGGATTGTTTGTATTGTACTTGTACTAATGCATAAGAAATGGGGTGAAAGGAGCATCATACATCTTGTTTGTACGAATGAACGGGAACGGGAAATAGTGGGAAACAGAAACAAATACACACAAACACACACACACACACTCCCA]
consensusID : consensus_6450#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 474 fasta sequence
[AATCGCCGAGGTTTCTTTGACTATAGGCCATGGTAGCGTGTTATCCTGGTTCCGGTTCGCACTACGTGAAGCACGTCGACAATCCCAACCGTGACGGGCGCTGCATTACCGCCATCTACTATCTCAATCTCGACTGGGACGTGCGGAAAAGTGGCGGTCTGTTAAGGATTTTCCCCGAGGGATGCAACGATCGGGTGGCTGACATCGAGCCCATCTTTGATCGCATTCTGTTCTTCTGGTCCGACCGGCGGAACCCGCACGAGGTGCAGCCGGCCCACCGCACTCGGTACGCCATCACGCTCTGGTATCTCGATGCGGAGGAGCGCGAGTCGGCCCGGTTGCGCTACCAGCGGGACTGCGAGAATCGCTTTAACAGCAAGGCCTAGTCGGGGTCGGGTCTCGGGTCGAAAGAGGAGCGAGAGCACACGCGCAAACGGTGGTGGAAGGGGGAAAGAGCGACCAGCCAGACCAGAC]
[+] EMBL AL931680 [AATCGCCGAGGTTTCTTTGACTATAGGCCATGGTAGCGTGTTATCCTGGTTCCGGTTCGCACTACGTGAAGCACGTCGACAATCCCAACCGTGACGGGCGCTGCATTACCGCCATCTACTATCTCAATCTCGACTGGGACGTGCGGAAAAGTGGCGGTCTGTTAAGGATTTTCCCCGAGGGATGCAACGATCGGGTGGCTGACATCGAGCCCATCTTTGATCGCATTCTGTTCTTCTGGTCCGACCGGCGGAACCCGCACGAGGTGCAGCCGGCCCACCGCACTCGGTACGCCATCACGCTCTGGTATCTCGATGCGGAGGAGCGCGAGTCGGCCCGGTTGCGCTACCAGCGGGACTGCGAGAATCGCTTTAACAGCAAGGCCTAGTCGGGGTCGGGTCTCGGGTCGAAAGAGGAGCGAGAGCACACGCGCAAACGGTGGTGGAAGGGGGAAAGAGCGACCAGCCAGACCAGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6450#0 CCGCCCACGCGTCCGCAACGGCAAACTCGGCCGGTACAACATCAAAGAGCGAACAAAGGC 60
consensus_6450#1 ----------------------------AATCGCCGAGGTTTCT----TTGACTATAGGC 28
** ** ** * ****
consensus_6450#0 CATGGTAGCGTGTTATCCTGGTTCCGGTTCGCATTACGTGAAGCACGTCGACAATCCCAA 120
consensus_6450#1 CATGGTAGCGTGTTATCCTGGTTCCGGTTCGCACTACGTGAAGCACGTCGACAATCCCAA 88
********************************* **************************
consensus_6450#0 CCGTGACGGGCGCTGCATTACCGCCATCTACTATCTCAATCTCGACTGGGACGTGCGGAA 180
consensus_6450#1 CCGTGACGGGCGCTGCATTACCGCCATCTACTATCTCAATCTCGACTGGGACGTGCGGAA 148
************************************************************
consensus_6450#0 AAGTGGCGGTCTGTTAAGGATTTTCCCCGAGGGATGCAACGATCGGGTGGCTGACATCGA 240
consensus_6450#1 AAGTGGCGGTCTGTTAAGGATTTTCCCCGAGGGATGCAACGATCGGGTGGCTGACATCGA 208
************************************************************
consensus_6450#0 GCCCATCTTTGATCGCATTCTGTTCTTCTGGTCCGACCGGCGGAACCCGCACGAGGTGCA 300
consensus_6450#1 GCCCATCTTTGATCGCATTCTGTTCTTCTGGTCCGACCGGCGGAACCCGCACGAGGTGCA 268
************************************************************
consensus_6450#0 GCCGGCCCACCGCACCCGGTACGCCATCACGCTCTGGTATCTCGATGCGGAGGAGCGCGA 360
consensus_6450#1 GCCGGCCCACCGCACTCGGTACGCCATCACGCTCTGGTATCTCGATGCGGAGGAGCGCGA 328
*************** ********************************************
consensus_6450#0 GTCGGCCCGGTTGCGCTACCAGCGGGACTGCGAGAATCGCTTTAACAGCAAGGCCTAGTC 420
consensus_6450#1 GTCGGCCCGGTTGCGCTACCAGCGGGACTGCGAGAATCGCTTTAACAGCAAGGCCTAGTC 388
************************************************************
consensus_6450#0 GGGGTCGGGTCTCGGGTCGAAAGAGGAGCGAGAGCACATGCGCAAACGGTGGTGCAAGAG 480
consensus_6450#1 GGGGTCGGGTCTCGGGTCGAAAGAGGAGCGAGAGCACACGCGCAAACGGTGGTGGAAGGG 448
************************************** *************** *** *
consensus_6450#0 GGAAAGAGCGACCAGTCAGACCAGACAGACAGACAGACAGACAGACAGGGACAGGAGGAT 540
consensus_6450#1 GGAAAGAGCGACCAGCCAGACCAGAC---------------------------------- 474
*************** **********
consensus_6450#0 CGGTGGTTCGTGGTTTACTGGATCTGTTCCCGGTGATGCGCGGTTGCTCTCGCGTTCGTA 600
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 CCAAATCGAATAATTTATTAGCAAAAAGCAAAACCTTGTTATCCAAATGTGATATAACTA 660
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 TACGTGTGGGTGTGTATGTGTGTGTGTGTGCATGAGGTTTAGTGGACAGGACTTACGTAC 720
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 AGTGTTTTACGTACTTGCACACATTGTGCGTTAAAATACAATGAGAGCAGTATGCATTAG 780
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 AATGGTAGAGAAAGTAAGTAAGATAAAGCAACGACCGCGCAGCCTAGGCCAAGGAGAGGA 840
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 GGTGAATATGTTTTGCAATCGTATTTGCAGTGTAAATAGCAGCAGATGGGCAAAAGTACA 900
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 GGAGCACTTAACACAAAGAATCGGTGCAGCGGGGATGTCAGTGATGATCNGATATTGGGT 960
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 TNCGGCAATGTTGATCGGTTTCATTAGCTAGCAAAATTGTTTAAATGTTTTTTTCCCCGC 1020
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 GGGTACTTTTGACGTGCTTGGCGCAGGGCAACGAAAAGAAGAACAAAAACAAGCAGGAGT 1080
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 AATTGGCGGAATTTGGCTGCTACACTGTAGAAAAGGATTGTTTGTATTGTACTTGTACTA 1140
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 ATGCATAAGAAATGGGGTGAAAGGAGCATCATACATCTTGTTTGTACGAATGAACGGGAA 1200
consensus_6450#1 ------------------------------------------------------------
consensus_6450#0 CGGGAAATAGTGGGAAACAGAAACAAATACACACAAACACACACACACACACTCCCA 1257
consensus_6450#1 ---------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||