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Anopheles gambiae
cluster # 6487 cluster # 6487       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6487#0 length = 945 sequences # 1  
consensus_6487#1 length = 751 sequences # 1  
consensus_6487#2 length = 725 sequences # 2  
consensus_6487#3 length = 599 sequences # 1  

consensusID : consensus_6487#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 945
fasta sequence
                              [AGATCCCCGAGGTTAATTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACAGGTAACTAATGGCAACCAGCGACGTAAACCCGGTCGCCCAGCGGTTAGCGGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAGATGGAGATGGGATCGGTTGTTTGTTCAGTCTTCATCACTGTCCAACGATGCTTAGGATGGGAGACATAACGAACACGGGCACTCAGGTGGAAGGGTAGGGTGAAACACTCATCTAATGCTGGCACAATGTTTACTCACACTTTCATTGTCTGTGTTACTTACCACACATCCGTGTATCATATCAGGCACCATAACAACTACTTTAAACAAAAACATTGGCATTGGTTTGCNAATCNANACCAAACGTATTTTACACCACTTTACATGNTCCCAATTCNCTTTTANTTCACGGAACCAAATTTAATTTACCCAAAAAAAAACCCCNTTTTCCNCCTTTACAAACCTATTTTCGCGACCNTNAAGTGATTATACCAGACCNCGTGGAGNAGGGTCNCGGATTCTCATAACAGCGACGAGACATGGTAGTACACACAAGGGTACTACAAAACGCGAAGCCCCAAAATATNATCACGNGGGGCCATAATATTAGTGAATATCCCAAAAAACNCTTAAATCTTTACCCGANGGGACAGAGAGAGAACCCCCNGCGTTTNGCCGCCCCGGAGTCATCAACCACACAANGGGTGATCACAAGTGGAACAATTACACGAGCGNCAAAACGGCGTGAGTCTCCCGANCTCNCTTGGGGACANCACAAACGCGCAGNGNGAATCCTTNAACTTTGGGAATTGGCCTATCCTTNAAACGTACACTTACAC]

[+] EMBL AL695081             [AGATCCCCGAGGTTAATTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACAGGTAACTAATGGCAACCAGCGACGTAAACCCGGTCGCCCAGCGGTTAGCGGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAGATGGAGATGGGATCGGTTGTTTGTTCAGTCTTCATCACTGTCCAACGATGCTTAGGATGGGAGACATAACGAACACGGGCACTCAGGTGGAAGGGTAGGGTGAAACACTCATCTAATGCTGGCACAATGTTTACTCACACTTTCATTGTCTGTGTTACTTACCACACATCCGTGTATCATATCAGGCACCATAACAACTACTTTAAACAAAAACATTGGCATTGGTTTGCNAATCNANACCAAACGTATTTTACACCACTTTACATGNTCCCAATTCNCTTTTANTTCACGGAACCAAATTTAATTTACCCAAAAAAAAACCCCNTTTTCCNCCTTTACAAACCTATTTTCGCGACCNTNAAGTGATTATACCAGACCNCGTGGAGNAGGGTCNCGGATTCTCATAACAGCGACGAGACATGGTAGTACACACAAGGGTACTACAAAACGCGAAGCCCCAAAATATNATCACGNGGGGCCATAATATTAGTGAATATCCCAAAAAACNCTTAAATCTTTACCCGANGGGACAGAGAGAGAACCCCCNGCGTTTNGCCGCCCCGGAGTCATCAACCACACAANGGGTGATCACAAGTGGAACAATTACACGAGCGNCAAAACGGCGTGAGTCTCCCGANCTCNCTTGGGGACANCACAAACGCGCAGNGNGAATCCTTNAACTTTGGGAATTGGCCTATCCTTNAAACGTACACTTACAC]


>consensus_6487#0 AGATCCCCGAGGTTAATTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGT GCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACA GGTAACTAATGGCAACCAGCGACGTAAACCCGGTCGCCCAGCGGTTAGCGGAAGCTCCGG CAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAGATGGAGATGGGATC GGTTGTTTGTTCAGTCTTCATCACTGTCCAACGATGCTTAGGATGGGAGACATAACGAAC ACGGGCACTCAGGTGGAAGGGTAGGGTGAAACACTCATCTAATGCTGGCACAATGTTTAC TCACACTTTCATTGTCTGTGTTACTTACCACACATCCGTGTATCATATCAGGCACCATAA CAACTACTTTAAACAAAAACATTGGCATTGGTTTGCNAATCNANACCAAACGTATTTTAC ACCACTTTACATGNTCCCAATTCNCTTTTANTTCACGGAACCAAATTTAATTTACCCAAA AAAAAACCCCNTTTTCCNCCTTTACAAACCTATTTTCGCGACCNTNAAGTGATTATACCA GACCNCGTGGAGNAGGGTCNCGGATTCTCATAACAGCGACGAGACATGGTAGTACACACA AGGGTACTACAAAACGCGAAGCCCCAAAATATNATCACGNGGGGCCATAATATTAGTGAA TATCCCAAAAAACNCTTAAATCTTTACCCGANGGGACAGAGAGAGAACCCCCNGCGTTTN GCCGCCCCGGAGTCATCAACCACACAANGGGTGATCACAAGTGGAACAATTACACGAGCG NCAAAACGGCGTGAGTCTCCCGANCTCNCTTGGGGACANCACAAACGCGCAGNGNGAATC CTTNAACTTTGGGAATTGGCCTATCCTTNAAACGTACACTTACAC



consensusID : consensus_6487#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 751
fasta sequence
                              [CCCAGCAGCTAGCGGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAGATGGAGATGGGATCGGTTTTCTTGTTCAGTCTTCATCACTGTCCAACGATGCTTAGGATGGGATACATAACGAACACAGGCACTCAGGTGGAAGGGTAGGGTGAAACACTCATCTAATGTTGCCACAATGTTTACTCACACTTTCATTGTCTGTGTTACTTACCACACATCCGTGTATCATATCAGGCACCCATAACAACTACTATAAACAAAAACATTGGATTGGTTTGAAATCAAAACAAACTATTTTACACACTTTACATGCTCGAATTCATTTTATTTCACGAACAACTTTATTACAAACAAACCCTTTTTCACTTACAACATATCACGCACCTTAGGTATCAGTACTGTGAGGTTCGCTTCATAACGCAGCAGTGATCAACGATCAACCAGCCAAATACTTCTGGTTCTATATATGTATCCCAAACCTTACTTTCGTTTGCAGCGATCGCGTTCGCCGTAAAAAAGGGTCAGTGAGATCAGCGATCGCTGCTCGAGCTCTGGAACAAGCAGCGATCTACTTGAATGCCTATCTTTAAGTACATAACTATTTAATGTAGACACGTTTTGCTTAAGGACGCAAAACGCAGAAATGGTATTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAGATCTTGGTGGAAATGATATTTTGTGCAGAAAAATTATGAA]

[+] EMBL BX626470             [CCCAGCAGCTAGCGGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAGATGGAGATGGGATCGGTTTTCTTGTTCAGTCTTCATCACTGTCCAACGATGCTTAGGATGGGATACATAACGAACACAGGCACTCAGGTGGAAGGGTAGGGTGAAACACTCATCTAATGTTGCCACAATGTTTACTCACACTTTCATTGTCTGTGTTACTTACCACACATCCGTGTATCATATCAGGCACCCATAACAACTACTATAAACAAAAACATTGGATTGGTTTGAAATCAAAACAAACTATTTTACACACTTTACATGCTCGAATTCATTTTATTTCACGAACAACTTTATTACAAACAAACCCTTTTTCACTTACAACATATCACGCACCTTAGGTATCAGTACTGTGAGGTTCGCTTCATAACGCAGCAGTGATCAACGATCAACCAGCCAAATACTTCTGGTTCTATATATGTATCCCAAACCTTACTTTCGTTTGCAGCGATCGCGTTCGCCGTAAAAAAGGGTCAGTGAGATCAGCGATCGCTGCTCGAGCTCTGGAACAAGCAGCGATCTACTTGAATGCCTATCTTTAAGTACATAACTATTTAATGTAGACACGTTTTGCTTAAGGACGCAAAACGCAGAAATGGTATTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAGATCTTGGTGGAAATGATATTTTGTGCAGAAAAATTATGAA]


>consensus_6487#1 CCCAGCAGCTAGCGGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACT GCTGTTCTAGATGGAGATGGGATCGGTTTTCTTGTTCAGTCTTCATCACTGTCCAACGAT GCTTAGGATGGGATACATAACGAACACAGGCACTCAGGTGGAAGGGTAGGGTGAAACACT CATCTAATGTTGCCACAATGTTTACTCACACTTTCATTGTCTGTGTTACTTACCACACAT CCGTGTATCATATCAGGCACCCATAACAACTACTATAAACAAAAACATTGGATTGGTTTG AAATCAAAACAAACTATTTTACACACTTTACATGCTCGAATTCATTTTATTTCACGAACA ACTTTATTACAAACAAACCCTTTTTCACTTACAACATATCACGCACCTTAGGTATCAGTA CTGTGAGGTTCGCTTCATAACGCAGCAGTGATCAACGATCAACCAGCCAAATACTTCTGG TTCTATATATGTATCCCAAACCTTACTTTCGTTTGCAGCGATCGCGTTCGCCGTAAAAAA GGGTCAGTGAGATCAGCGATCGCTGCTCGAGCTCTGGAACAAGCAGCGATCTACTTGAAT GCCTATCTTTAAGTACATAACTATTTAATGTAGACACGTTTTGCTTAAGGACGCAAAACG CAGAAATGGTATTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAGATCTTGGTG GAAATGATATTTTGTGCAGAAAAATTATGAA



consensusID : consensus_6487#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 725
fasta sequence
                              [CCGACGATGTCAGCTCGGACAACATCGTGATCGTCGATGCGCAAACGCTGCTCGTACCCAACTTCAGCTACGATGGCGAAGCACCAGATGCCAAGTTTTGGGTGGGACGCGGGCCAGCACCGACATCGCAGGGTATTCGCATCCCAGACGAGAATGGCAAGGAGACACCGCTGCGTCGCTACGACAAGAAGACGATCGTTCTGACCCTGCCCGGTGATCTGACCGTGTTCGACATTGGTCACTTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACAGCGATCGCGTTCGCCGTAAAAAAGGGTCAGTGAGATCAGCGATCGCTGCTCGAGCTCTGGAACAAGCAGCGATCTACTTGAATGCCTATCTTTAAGTACATAACTATTTAATGTAGACACGTTTTGCTTAAGGACGCAAAACGCAGAAATGGTATTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAGATCATGGTGGAAATGATATTTTGTGCAGAAAAATTATGAAAATTTTAAATTATCTCATTAATCTCGCATTGCAAAACAAAGCCAAATTTGTACTATTGTTCGAGAGCTACGAAATTGAAGAACATTTGAGAAGAGTCCCGTGACATCCTTTTAGGTTGTAAATAAAAATTCCACTACAAAAATGT]

[+] EMBL BM635516             [CCGACGATGTCAGCTCGGACAACATCGTGATCGTCGATGCGCAAACGCTGCTCGTACCCAACTTCAGCTACGATGGCGAAGCACCAGATGCCAAGTTTTGGGTGGGACGCGGGCCAGCACCGACATCGCAGGGTATTCGCATCCCAGACGAGAATGGCAAGGAGACACCGCTGCGTCGCTACGACAAGAAGACGATCGTTCTGACCCTGCCCGGTGATCTGACCGTGTTCGACATTGGTCACTTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACAGCGATCGCGTTCGCCGTAAAAAAGGGTCAGTGAGATCAGCGATCGCTGCTCGAGCTCTGGAACAAGCAGCGATCTACTTGAATGCCTATCTTTAAGTACATAACTATTTAATGTAGACACGTTTTGCTTAAGGACGCAAAACGCAGAAATGGTATTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAGATCATGGTGGAAATGATATTTTGTGCAGAAAAATTATGAAAATTTTAAATTATCTCATTAATCTCGCATTGCAAAACAAAGC                                                                                                       ]
[+] EMBL BM593572             [                                                                                                                                                                                                                                              ccgCTTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACAGCGATCGCGTTCGCCGTAAAAAAGGGTCAGTGAGATCAGCGATCGCTGCTCGAGCTCTGGAACAAGCAGCGATCTACTCGAATGCCTATCTTTAAGTACATAACTATTTAATGTAGACACGTTTTGCTTAAGGACGCAAAACGCAGAAATGGTATTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAGATCTTGGTGGAAATGATATTTTGTGCAGAAAAATTATGAAAATTTTAAATTATCTCATTAATCTCGCATTGCAAAAAAAAAACAAATTTGTACTATTGTTCGAGAGCTACGAAATTGAAGAACATTTGAGAAGAGTCCCGTGACATCCTTTTAGGTTGTAAATAAAAATTCCACTACAAAAATGT]


>consensus_6487#2 CCGACGATGTCAGCTCGGACAACATCGTGATCGTCGATGCGCAAACGCTGCTCGTACCCA ACTTCAGCTACGATGGCGAAGCACCAGATGCCAAGTTTTGGGTGGGACGCGGGCCAGCAC CGACATCGCAGGGTATTCGCATCCCAGACGAGAATGGCAAGGAGACACCGCTGCGTCGCT ACGACAAGAAGACGATCGTTCTGACCCTGCCCGGTGATCTGACCGTGTTCGACATTGGTC ACTTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGTGCGCATCCCGGACC AGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACAGCGATCGCGTTCGC CGTAAAAAAGGGTCAGTGAGATCAGCGATCGCTGCTCGAGCTCTGGAACAAGCAGCGATC TACTTGAATGCCTATCTTTAAGTACATAACTATTTAATGTAGACACGTTTTGCTTAAGGA CGCAAAACGCAGAAATGGTATTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAG ATCATGGTGGAAATGATATTTTGTGCAGAAAAATTATGAAAATTTTAAATTATCTCATTA ATCTCGCATTGCAAAACAAAGCCAAATTTGTACTATTGTTCGAGAGCTACGAAATTGAAG AACATTTGAGAAGAGTCCCGTGACATCCTTTTAGGTTGTAAATAAAAATTCCACTACAAA AATGT



consensusID : consensus_6487#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence
                              [TGCTCGAGCAGATCGCCAGAGGNNTNATTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACAGGTAACTAATGGCAACCAGCGACGTAAACCCGGTCGCCCAGCGGTTAGCGGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAATGGAGATGGGATCGGTTGTTTGTTCAGTCTTCATCACTGTCCAACGATGCTTAGGATGGGAGACATAACGAACACGGGCACTCAGGTGGAAGGGTANNGGTGAAACACTCATCTAATGCTGCCACAATGTTTACTCACACTTTCATTCGTCTGTGTTACTTACCACACATCCGTGTATCATATCAGGCACCCATAACAAACTACTTTACAAGCAACAACACCATTGGGANTTGGCTTTGACATTCAAAAACCAAAAGCTATTTATACCACNACTTTACACATTGCTCGAAATTCATTCTNCAACTTTCAACGAAACCAACCTTTTTATTACAAAACAAAACCACTTTAATCACCATTAACAA]

[+] EMBL AL696578             [TGCTCGAGCAGATCGCCAGAGGNNTNATTTGGTGTGTGGTGCGAGGCATTCACTGTCGACTTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGCATCAGCCCACAGGTAACTAATGGCAACCAGCGACGTAAACCCGGTCGCCCAGCGGTTAGCGGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAATGGAGATGGGATCGGTTGTTTGTTCAGTCTTCATCACTGTCCAACGATGCTTAGGATGGGAGACATAACGAACACGGGCACTCAGGTGGAAGGGTANNGGTGAAACACTCATCTAATGCTGCCACAATGTTTACTCACACTTTCATTCGTCTGTGTTACTTACCACACATCCGTGTATCATATCAGGCACCCATAACAAACTACTTTACAAGCAACAACACCATTGGGANTTGGCTTTGACATTCAAAAACCAAAAGCTATTTATACCACNACTTTACACATTGCTCGAAATTCATTCTNCAACTTTCAACGAAACCAACCTTTTTATTACAAAACAAAACCACTTTAATCACCATTAACAA]


>consensus_6487#3 TGCTCGAGCAGATCGCCAGAGGNNTNATTTGGTGTGTGGTGCGAGGCATTCACTGTCGAC TTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGC ATCAGCCCACAGGTAACTAATGGCAACCAGCGACGTAAACCCGGTCGCCCAGCGGTTAGC GGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAATGG AGATGGGATCGGTTGTTTGTTCAGTCTTCATCACTGTCCAACGATGCTTAGGATGGGAGA CATAACGAACACGGGCACTCAGGTGGAAGGGTANNGGTGAAACACTCATCTAATGCTGCC ACAATGTTTACTCACACTTTCATTCGTCTGTGTTACTTACCACACATCCGTGTATCATAT CAGGCACCCATAACAAACTACTTTACAAGCAACAACACCATTGGGANTTGGCTTTGACAT TCAAAAACCAAAAGCTATTTATACCACNACTTTACACATTGCTCGAAATTCATTCTNCAA CTTTCAACGAAACCAACCTTTTTATTACAAAACAAAACCACTTTAATCACCATTAACAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6487#0      ---------AGATCCCCGA--GGTTAATTTGGTGTGTGGTGCGAGGCATTCACTGTCGAC 49
consensus_6487#3      TGCTCGAGCAGATCGCCAGAGGNNTNATTTGGTGTGTGGTGCGAGGCATTCACTGTCGAC 60
consensus_6487#1      ------------------------------------------------------------
consensus_6487#2      ------------------------------------------------------------
                                                                                  

consensus_6487#0      TTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGC 109
consensus_6487#3      TTTGGGCACGTGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTGGC 120
consensus_6487#1      ------------------------------------------------------------
consensus_6487#2      --------------CCGACGATGTCAGCTCGG-ACAACATCGTGATCGTCGATGCGCAAA 45
                                                                                  

consensus_6487#0      ATCAGCCCACAGGTAACTAATGGCAACCAGCGACGTAAACCCGGTCGCCCAGCGGTTAGC 169
consensus_6487#3      ATCAGCCCACAGGTAACTAATGGCAACCAGCGACGTAAACCCGGTCGCCCAGCGGTTAGC 180
consensus_6487#1      -----------------------------------------------CCCAGCAGCTAGC 13
consensus_6487#2      CGCTGCTCGTACCCAACTTCAGCTA--CGATGGCGAAGCACCAGATGCCAAGTTTTGGGT 103
                                                                     ** **      * 

consensus_6487#0      GGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAGATG 229
consensus_6487#3      GGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTA-ATG 239
consensus_6487#1      GGAAGCTCCGGCAGCTCTGGTGGGCTGCTGGACTACGTTGGCTCACTGCTGTTCTAGATG 73
consensus_6487#2      GGGACGCGGGCCAGCACCGACA--TCGCAGG-----GTATTCGCATCCCAGACGAGAATG 156
                      ** *     * **** * *       ** **     **   * **   * *      ***

consensus_6487#0      GAGATGGGAT-CGGTTGT-TTGTTCAGTCTTCATCACTGTC----CAACGATGCTTAGGA 283
consensus_6487#3      GAGATGGGAT-CGGTTGT-TTGTTCAGTCTTCATCACTGTC----CAACGATGCTTAGGA 293
consensus_6487#1      GAGATGGGAT-CGGTTTTCTTGTTCAGTCTTCATCACTGTC----CAACGATGCTTAGGA 128
consensus_6487#2      GCAAGGAGACACCGCTGCGTCGCTACGACAAGAAGACGATCGTTCTGACCCTGCCCGGTG 216
                      *  * * **  * * *   * * *  * *   *  **  **      **  ***   *  

consensus_6487#0      TGGGAGACATAACGAACACGGG-CACTCAGGTGGAAGGGTAGGG-TGAAACACTCATCTA 341
consensus_6487#3      TGGGAGACATAACGAACACGGG-CACTCAGGTGGAAGGGTANNGGTGAAACACTCATCTA 352
consensus_6487#1      TGGGATACATAACGAACACAGG-CACTCAGGTGGAAGGGTAGGG-TGAAACACTCATCTA 186
consensus_6487#2      ATCTGACCGTGTTCGACATTGGTCACTTTGGTGTGTGGTGCGAG--GCATTCACTGTCGA 274
                             * *     ***  ** ****  ****   **     *  * *       ** *

consensus_6487#0      ATGCTGGCACAATGTTTACTCACACTTTCATT-GTCTGTGTTACTTACCACACATCCGTG 400
consensus_6487#3      ATGCTGCCACAATGTTTACTCACACTTTCATTCGTCTGTGTTACTTACCACACATCCGTG 412
consensus_6487#1      ATGTTGCCACAATGTTTACTCACACTTTCATT-GTCTGTGTTACTTACCACACATCCGTG 245
consensus_6487#2      CTTTGGGCACG-TGCGCATCCCGGACCAGATCAATGTGCCACCGTCGCTGAAGATGCTTG 333
                       *   * ***  **   *  *        **   * **      *  *   * ** * **

consensus_6487#0      -TATCATATCAGGCACC-ATAACAA-CTACTTTA-----AACAAAAACATTGGCATTGG- 451
consensus_6487#3      -TATCATATCAGGCACCCATAACAAACTACTTTACAAGCAACAACACCATTGGGANTTGG 471
consensus_6487#1      -TATCATATCAGGCACCCATAACAA-CTACTATA-----AACAAAAACATTGG-ATTGG- 296
consensus_6487#2      GCATCAGCCCA--CAGCGATCGCGT-TCGCCGTAA----AAAAGGGTCAGTGAGATCAGC 386
                        ****   **  ** * **  *      *  **     ** *    ** **  *   * 

consensus_6487#0      -TTTGCNAATCNANA-CCAAACGTATTTTA---CACCACTTTACA---TGNTCCCAATTC 503
consensus_6487#3      CTTTGACATTCAAAAACCAAAAGCTATTTATACCACNACTTTACACATTGCTCGAAATTC 531
consensus_6487#1      -TTTG-AAATCAAAA--CAAAC-TATTTTA---CAC-ACTTTACA---TGCTCG-AATTC 343
consensus_6487#2      GATCGCTGCTCGAGCTCTGGAA-CAAGCAGCGATCTACTTGAATGCCTATCTTTAAGTAC 445
                        * *    ** *       *                  *  *        *   * * *

consensus_6487#0      NCTTTTAN---TTCACGGAACCAAATTTAATTTACCCAAAAAAAAACCCCNTTTTCCNCC 560
consensus_6487#3      ATTCTNCAACTTTCAACGAAACCAACCTTTTTATTACAAAACAAAACCACTTTAATCACC 591
consensus_6487#1      ATTTTAT----TTCACGAA---CAACTTTATT-----ACAAACAAACCCTTTT--TCACT 389
consensus_6487#2      ATAACTAT---TTAATGTAGACACGTTTTGCTTA---AGGACGCAAAACGCAGAAATGGT 499
                                 ** *   *        *   *     *  *   **              

consensus_6487#0      TTTACAAACCTATTTTCGCGACCNTNAAGTGATTATACCAGACCNCGTGGAGNAGGGTCN 620
consensus_6487#3      ATTAACAA---------------------------------------------------- 599
consensus_6487#1      TACAACATATCACGCACCTTAGGTATCAGTACTGTGA--GGTTCGCTTCATAACGCAGCA 447
consensus_6487#2      ATTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAGATCATGGTGGAAATGATAT 559
                            *                                                     

consensus_6487#0      CGGATTCTCATAACAGCGACGAGACATGGTAGTACACACAAGG---GTACTACAAAACGC 677
consensus_6487#3      ------------------------------------------------------------
consensus_6487#1      GTGATCAACGATCAACCAGCCAAATACTTCTGGTTCTATATAT---GTATCCCAAACCTT 504
consensus_6487#2      TTTGTGCAGAAAAATTATGAAAATTTTAAATTATCTCATTAATCTCGCATTGCAAAACAA 619
                                                                                  

consensus_6487#0      GAAGCCCCAAAATATNATCACGNGGGGCCATAATATTAGTGAATATCCCAAAAAACNCTT 737
consensus_6487#3      ------------------------------------------------------------
consensus_6487#1      ACTTTCGTTTGCAGCGATCGCGTTCGCCGTAAAAAAGGGTCAGTG----AGATCAGCGAT 560
consensus_6487#2      AGCCAAATTTGTACTATTGTTCGAGAGCTACGAAATTGAAGAACATTTGAGAAGAGTCCC 679
                                                                                  

consensus_6487#0      AAATCTTTACCCGANGGGACAGAGAGAGAACCCCCNGCGTTTNGCCGCCCCGGAGTCATC 797
consensus_6487#3      ------------------------------------------------------------
consensus_6487#1      CGCTGCTCGAGCTCTGGAACAAGCAGCGATCTACTTGAAT--GCCTATCTTTAAGTACAT 618
consensus_6487#2      GTGACATCCTTTTAGGTTGTAAATAAAAATTCCACTACAAAAATGT-------------- 725
                                                                                  

consensus_6487#0      AACCACACAANGGGTGATCACAAGTGGAACAATTACACGAGCGNCAAAACGGCGTGAGTC 857
consensus_6487#3      ------------------------------------------------------------
consensus_6487#1      AACTATTTAATG--TAGACACGTTTTGCTTAAGGACGCAAAACGCAGAAATG-----GTA 671
consensus_6487#2      ------------------------------------------------------------
                                                                                  

consensus_6487#0      TCCCGANCTCNCTTGGGGACANCACAAACGCGCAGNGNGAATCCTTNAACTTTGGGAATT 917
consensus_6487#3      ------------------------------------------------------------
consensus_6487#1      TTGTTAGTGTTACTGTACTTTCCGTAAACACGTGTGGGAGATCTTGG-----TGGAAATG 726
consensus_6487#2      ------------------------------------------------------------
                                                                                  

consensus_6487#0      GGCCTATCCTTNAAACGTACACTTACAC 945
consensus_6487#3      ----------------------------
consensus_6487#1      ATATTTTGTGCAGAAAAATTATGAA--- 751
consensus_6487#2      ----------------------------
                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)