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Anopheles gambiae
cluster # 6488 cluster # 6488       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6488#0 length = 1406 sequences # 2  
consensus_6488#1 length = 891 sequences # 1  
consensus_6488#2 length = 701 sequences # 1  
consensus_6488#3 length = 535 sequences # 1  

consensusID : consensus_6488#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1406
fasta sequence
                              [CCGGAATATTTGTCTGCGGATAGTCTGTAGCGTGTCTAGTTTGTGCACATAGCATTTAGAGTATTTTATTAGAAAATTTATTGTTTATCCAGTAGTGTGATTAGTTCAACGCGTTTTAATCAATCACACTGAGGCAACAGTTTTATTCGCTTTTGCGTAAGGATACACCGTAACAAAGCTGCAAAGTGTACCACGGGGTGAAACCTAGGGCATCAAGGGATACGAAGTGAATGAGCCTAGTCTGTACTAGAGTCATCAGGGGGCTGGTTCATTCATCTTCACTAAAAACACCGGAGAGCAGCTATTACCTGCCATCTAACTACGTCAAAATGCGCGTGGAAATGAATCTGGATGTTCAGCACTGTCACGATGATATCGACACGAAAATAGCAGAGTTCAAGCAAGATGCGAACAAAATGAACGAGCTTAACCTTTTCCTTGACAGTGTGCTGGAAGAGGCGCAGAGGAATGCGGAAGTGAAACTGCAAAGCAAATTGGATGATGAGCGACCTAAAAATGGAAACAAACTTCTCAGCGGCATAAAGCAACACAGAATGGTGACACGCCCTTAAGGGGGATTGTTTTACGAATCTTTGAAGCTATTTGTAACTGCACAAACTCCGCCACTATACCAGGGCAGCGGCCAGCTACAGCACCGGCTCAACGTTGGATCTACTTCGAAAAACTAAACAACTGGTACTATCTTCAAGCTGTCATCCCACTGGTACTATATTTAACTACAAACAGCAAACAATAACGAGTTACCGACCCAGTACGTCGGTATGGATGTGTTGTCGTATGTTTTATCATCAAAATAGGCAGACTATTCGTAGCAATGGGAAATGTTGGTCCTAAATCGAGTTACACTGACTGTTTATCGAGCTTTTTTTTACACTTCTATTTTTCCAAACCACACACAAACTCAATATTCATGTGACCGTATTCAATGCTCGAATTGAACCAGGTGACTGTTAAATATATTCTGATTGTATTCATAAACTTGTGTATACTACAATACCATTTACAAAACCATCGCCTTATCCTTTNTGATGTGGTTTACTTAGAGCGAATCAAATGTATACATGAAGCTAACAATCCCACCAAAGCGCATCACATTCCCCAGCAAAGAATCTCCGGCCTTTAAACAATTTTCAGAAACAGTTCATGTTAACTCTAATACCGATTTCCTANTTTTAACAGGGTTTCAAACAACCAAAGCGTTCTTTCCTTTCCACAACGAAAGGGTTACCATTCGNATTTCATTTTGCAACAAGGCGCTTCANTTGGTTAACAAAAAGCCCAATTTNGAANAACTTTTGACATCCAACCCAGNTAATTCCNCGAAAATATACCCGGGNTTTTNGAATTTCCGGAAAATCCCNCAAATTATTCGTTCTTCAAANAGA]

[+] EMBL BM631268             [CCGGAATATTTGTCTGCGGATAGTCTGTAGCGTGTCTAGTTTGTGCACATAGCATTTAGAGTATTTTATTAGAAAATTTATTGTTTATCCAGTAGTGTGATTAGTTCAACGCGTTTTAATCAATCACACTGAGGCAACAGTTTTATTCGCTTTTGCGTAAGGATACACCGTAACAAAGCTGCAAAGTGTACCACGGGGTGAAACCTAGGGCATCAAGGGATACGAAGTGAATGAGCCTAGTCTGTACTAGAGTCATCAGGGGGCTGGTTCATTCATCTTCACTAAAAACACCGGAGAGCAGCTATTACCTGCCATCTAACTACGTCAAAATGCGCGTGGAAATGAATCTGGATGTTCAGCACTGTCACGATGATATCGACACGAAAATAGCAGAGTTCAAGCAAGATGCGAACAAAATGAACGAGCTTAACCTTTTCCTTGACAGTGTGCTGGAAGAGGCGCAGAGGAATGCGGAAGTGAAACTGCAAAGCAAATTGGATGATGAGCGACCTAAAAATGGAAACAAACTTCTCAGCGGCATAAAGCAACACAGAATGGTGACACGCCCTTAAGGGGGATTGTTTTACGAATCTTTGAAGCTATTTGTAACTGCACAAACTCCGCCACTATACCAGGGCAGCGGCCAGCTACAGCACCGGCTCAACGTTGGATCTACTTCGAAAAACTAAACAACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX467846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGAATCGCCCACGAGGTCGGAAGTGAAACTGC AAGCAAATTGGATGAAGAGCGACCTAAAAATGGAAACAAACTTCTCAGCGGCATAAAGCAACACAGAATGGTGACACGCACT  AGGGGGATTGTTTTACGAATCTTTGAAGCTATTTGTAACTGCACAAACTCCGCCACTATACCAGGGCAGCGGCCAGCTACAGCACCGGCT AACGTTGGATCTACTTCGAAAAACTAAACAACTGGTACTATCTTCAAGCTGTCATCCCACTGGTACTATATTTAACTACAAACAGCAAACAATAACGAGTTACCGACCCAGTACGTCGGTATGGATGTGTTGTCGTATGTTTTATCATCAAAATAGGCAGACTATTCGTAGCAATGGGAAATGTTGGTCCTAAATCGAGTTACACTGACTGTTTATCGAGCTTTTTTTTACACTTCTATTTTTCCAAACCACACACAAACTCAATATTCATGTGACCGTATTCAATGCTCGAATTGAACCAGGTGACTGTTAAATATATTCTGATTGTATTCATAAACTTGTGTATACTACAATACCATTTACAAAACCATCGCCTTATCCTTTNTGATGTGGTTTACTTAGAGCGAATCAAATGTATACATGAAGCTAACAATCCCACCAAAGCGCATCACATTCCCCAGCAAAGAATCTCCGGCCTTTAAACAATTTTCAGAAACAGTTCATGTTAACTCTAATACCGATTTCCTANTTTTAACAGGGTTTCAAACAACCAAAGCGTTCTTTCCTTTCCACAACGAAAGGGTTACCATTCGNATTTCATTTTGCAACAAGGCGCTTCANTTGGTTAACAAAAAGCCCAATTTNGAANAACTTTTGACATCCAACCCAGNTAATTCCNCGAAAATATACCCGGGNTTTTNGAATTTCCGGAAAATCCCNCAAATTATTCGTTCTTCAAANAGA]


>consensus_6488#0 CCGGAATATTTGTCTGCGGATAGTCTGTAGCGTGTCTAGTTTGTGCACATAGCATTTAGA GTATTTTATTAGAAAATTTATTGTTTATCCAGTAGTGTGATTAGTTCAACGCGTTTTAAT CAATCACACTGAGGCAACAGTTTTATTCGCTTTTGCGTAAGGATACACCGTAACAAAGCT GCAAAGTGTACCACGGGGTGAAACCTAGGGCATCAAGGGATACGAAGTGAATGAGCCTAG TCTGTACTAGAGTCATCAGGGGGCTGGTTCATTCATCTTCACTAAAAACACCGGAGAGCA GCTATTACCTGCCATCTAACTACGTCAAAATGCGCGTGGAAATGAATCTGGATGTTCAGC ACTGTCACGATGATATCGACACGAAAATAGCAGAGTTCAAGCAAGATGCGAACAAAATGA ACGAGCTTAACCTTTTCCTTGACAGTGTGCTGGAAGAGGCGCAGAGGAATGCGGAAGTGA AACTGCAAAGCAAATTGGATGATGAGCGACCTAAAAATGGAAACAAACTTCTCAGCGGCA TAAAGCAACACAGAATGGTGACACGCCCTTAAGGGGGATTGTTTTACGAATCTTTGAAGC TATTTGTAACTGCACAAACTCCGCCACTATACCAGGGCAGCGGCCAGCTACAGCACCGGC TCAACGTTGGATCTACTTCGAAAAACTAAACAACTGGTACTATCTTCAAGCTGTCATCCC ACTGGTACTATATTTAACTACAAACAGCAAACAATAACGAGTTACCGACCCAGTACGTCG GTATGGATGTGTTGTCGTATGTTTTATCATCAAAATAGGCAGACTATTCGTAGCAATGGG AAATGTTGGTCCTAAATCGAGTTACACTGACTGTTTATCGAGCTTTTTTTTACACTTCTA TTTTTCCAAACCACACACAAACTCAATATTCATGTGACCGTATTCAATGCTCGAATTGAA CCAGGTGACTGTTAAATATATTCTGATTGTATTCATAAACTTGTGTATACTACAATACCA TTTACAAAACCATCGCCTTATCCTTTNTGATGTGGTTTACTTAGAGCGAATCAAATGTAT ACATGAAGCTAACAATCCCACCAAAGCGCATCACATTCCCCAGCAAAGAATCTCCGGCCT TTAAACAATTTTCAGAAACAGTTCATGTTAACTCTAATACCGATTTCCTANTTTTAACAG GGTTTCAAACAACCAAAGCGTTCTTTCCTTTCCACAACGAAAGGGTTACCATTCGNATTT CATTTTGCAACAAGGCGCTTCANTTGGTTAACAAAAAGCCCAATTTNGAANAACTTTTGA CATCCAACCCAGNTAATTCCNCGAAAATATACCCGGGNTTTTNGAATTTCCGGAAAATCC CNCAAATTATTCGTTCTTCAAANAGA



consensusID : consensus_6488#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 891
fasta sequence
                              [CAAGAATCCGCACGATGGAGTTTATTAGAGCGAATCAAAACTGTATACATGAAGCTACAATCCCACCAAAGCGCATCACATTCCCCACCAAAGAATCTCCGGCCTTGAAACAATTTTCAGAAACATCATGTACTCTATACAGATTTTCTATTTAAAGGTTTCAACAACAAAGCGTCTTCTTCAACGAGGTACATTATATTGAAAGCATGCAATGTAACAAACCATAGAAAATTAAATCAACAGTGATCGCAATAACGGTATTAGTTCGAAATCCAATAATGTTTTGAAAGTATCTTCCCAATCCTGTGCTCCCTAGCAATGCAGCATTATCCATAAATCTAAAACTAAAAAATTATTTTTGCAGAAACCGGAAAAACACGCACATTAAAGATTCAAACAATAAATACGGTAGCAAGTTTGATCCTTAAAGGCAATTTTTAATTAAAAATATGCCATAATTTTACAAAGGAACTTGATGATTTATTCACATGGTTTGTAATAGCAATTCAAAAATTCAAATGCGTTAAAAAAAACCAACAATTGTTCGAATGTGTCGTAAACCATTTGTCTATTTCGTTGTTTCATTAGACTTGAGGGACAATCAAAATTATGACGCAATATTTACAGCCAATTAAAAAACCTTCGTAGAGAAAACGGGTTGGAACAAAATTCTTCAACCAAAATCTTTCTAAGCATTTTGACGGTTGANAGTACCAGGGTTACTTTGGAANCCAATTTTACTTGAAAACACAAAAGAGGTTTTTCAGNAGGATTTCCCAGGTTCCGGTNATTCTNGGTACGGAATCCTGGTCACTGGTGGTAGGTGGCCAACCAAGGGGGAGTTGAAANATCNGGGGGTANAGAGCCATTTCGGACGAANGNAGCACNAGG]

[+] EMBL BX468256             [CAAGAATCCGCACGATGGAGTTTATTAGAGCGAATCAAAACTGTATACATGAAGCTACAATCCCACCAAAGCGCATCACATTCCCCACCAAAGAATCTCCGGCCTTGAAACAATTTTCAGAAACATCATGTACTCTATACAGATTTTCTATTTAAAGGTTTCAACAACAAAGCGTCTTCTTCAACGAGGTACATTATATTGAAAGCATGCAATGTAACAAACCATAGAAAATTAAATCAACAGTGATCGCAATAACGGTATTAGTTCGAAATCCAATAATGTTTTGAAAGTATCTTCCCAATCCTGTGCTCCCTAGCAATGCAGCATTATCCATAAATCTAAAACTAAAAAATTATTTTTGCAGAAACCGGAAAAACACGCACATTAAAGATTCAAACAATAAATACGGTAGCAAGTTTGATCCTTAAAGGCAATTTTTAATTAAAAATATGCCATAATTTTACAAAGGAACTTGATGATTTATTCACATGGTTTGTAATAGCAATTCAAAAATTCAAATGCGTTAAAAAAAACCAACAATTGTTCGAATGTGTCGTAAACCATTTGTCTATTTCGTTGTTTCATTAGACTTGAGGGACAATCAAAATTATGACGCAATATTTACAGCCAATTAAAAAACCTTCGTAGAGAAAACGGGTTGGAACAAAATTCTTCAACCAAAATCTTTCTAAGCATTTTGACGGTTGANAGTACCAGGGTTACTTTGGAANCCAATTTTACTTGAAAACACAAAAGAGGTTTTTCAGNAGGATTTCCCAGGTTCCGGTNATTCTNGGTACGGAATCCTGGTCACTGGTGGTAGGTGGCCAACCAAGGGGGAGTTGAAANATCNGGGGGTANAGAGCCATTTCGGACGAANGNAGCACNAGG]


>consensus_6488#1 CAAGAATCCGCACGATGGAGTTTATTAGAGCGAATCAAAACTGTATACATGAAGCTACAA TCCCACCAAAGCGCATCACATTCCCCACCAAAGAATCTCCGGCCTTGAAACAATTTTCAG AAACATCATGTACTCTATACAGATTTTCTATTTAAAGGTTTCAACAACAAAGCGTCTTCT TCAACGAGGTACATTATATTGAAAGCATGCAATGTAACAAACCATAGAAAATTAAATCAA CAGTGATCGCAATAACGGTATTAGTTCGAAATCCAATAATGTTTTGAAAGTATCTTCCCA ATCCTGTGCTCCCTAGCAATGCAGCATTATCCATAAATCTAAAACTAAAAAATTATTTTT GCAGAAACCGGAAAAACACGCACATTAAAGATTCAAACAATAAATACGGTAGCAAGTTTG ATCCTTAAAGGCAATTTTTAATTAAAAATATGCCATAATTTTACAAAGGAACTTGATGAT TTATTCACATGGTTTGTAATAGCAATTCAAAAATTCAAATGCGTTAAAAAAAACCAACAA TTGTTCGAATGTGTCGTAAACCATTTGTCTATTTCGTTGTTTCATTAGACTTGAGGGACA ATCAAAATTATGACGCAATATTTACAGCCAATTAAAAAACCTTCGTAGAGAAAACGGGTT GGAACAAAATTCTTCAACCAAAATCTTTCTAAGCATTTTGACGGTTGANAGTACCAGGGT TACTTTGGAANCCAATTTTACTTGAAAACACAAAAGAGGTTTTTCAGNAGGATTTCCCAG GTTCCGGTNATTCTNGGTACGGAATCCTGGTCACTGGTGGTAGGTGGCCAACCAAGGGGG AGTTGAAANATCNGGGGGTANAGAGCCATTTCGGACGAANGNAGCACNAGG



consensusID : consensus_6488#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 701
fasta sequence
                              [CCGGCGGCCAGCTACAGCACCGGCTAACGTTGGATCTACTTCGAAAAACTAAACAACTGGTACTATCTTCAAGCTGTCATCCCACTGGTACTATATGTAACTACAAACAGCAAACAATAACGAGTTACCGACCCAGTACTTCGGTATGGATGTGTTGTCGTATGTTTTATCATCAAAATAGGCAGACTATTCGTAGCAATGGGAAATGTTGGTCCTAAATCGAGTTACACTGACTGTTTATCGAGCTTTTTTTTACACTTCTATTTTTCCAACCACACACAAACTCAATATTCATGTGACCGTATTCAATGCTCGAATTGAACCAGGTGACTGTTAAATATATTCTGATTGTATTCATAAATTGTGTATACTACAATACCATTTACAAAACCATCGCCATATCCTTTTTGATGTGGTTTATTAGAGCGAATCAAAATGTATACATGAAGCTACAATCCCACCAAAGCGCATCACATTCCCCACCAAAGAATCTCCGGCCTTGAAACAATTTTCAGAAACATCATGTACTCTATACAGATTTTCTATTTAAAGGTTTCAACAACAAAGCGTCTTCTTCAACGAGGTACATTATATTGAAAGCATGCAATGTAACAAACCATAGAAAATTAAATCAACAGTGATCGCAATAACGGTATTAGTTCGAAATCCCATAGTGGTTTGAAGTATCTTCCCAATCCTGT]

[+] EMBL BM632578             [CCGGCGGCCAGCTACAGCACCGGCTAACGTTGGATCTACTTCGAAAAACTAAACAACTGGTACTATCTTCAAGCTGTCATCCCACTGGTACTATATGTAACTACAAACAGCAAACAATAACGAGTTACCGACCCAGTACTTCGGTATGGATGTGTTGTCGTATGTTTTATCATCAAAATAGGCAGACTATTCGTAGCAATGGGAAATGTTGGTCCTAAATCGAGTTACACTGACTGTTTATCGAGCTTTTTTTTACACTTCTATTTTTCCAACCACACACAAACTCAATATTCATGTGACCGTATTCAATGCTCGAATTGAACCAGGTGACTGTTAAATATATTCTGATTGTATTCATAAATTGTGTATACTACAATACCATTTACAAAACCATCGCCATATCCTTTTTGATGTGGTTTATTAGAGCGAATCAAAATGTATACATGAAGCTACAATCCCACCAAAGCGCATCACATTCCCCACCAAAGAATCTCCGGCCTTGAAACAATTTTCAGAAACATCATGTACTCTATACAGATTTTCTATTTAAAGGTTTCAACAACAAAGCGTCTTCTTCAACGAGGTACATTATATTGAAAGCATGCAATGTAACAAACCATAGAAAATTAAATCAACAGTGATCGCAATAACGGTATTAGTTCGAAATCCCATAGTGGTTTGAAGTATCTTCCCAATCCTGT]


>consensus_6488#2 CCGGCGGCCAGCTACAGCACCGGCTAACGTTGGATCTACTTCGAAAAACTAAACAACTGG TACTATCTTCAAGCTGTCATCCCACTGGTACTATATGTAACTACAAACAGCAAACAATAA CGAGTTACCGACCCAGTACTTCGGTATGGATGTGTTGTCGTATGTTTTATCATCAAAATA GGCAGACTATTCGTAGCAATGGGAAATGTTGGTCCTAAATCGAGTTACACTGACTGTTTA TCGAGCTTTTTTTTACACTTCTATTTTTCCAACCACACACAAACTCAATATTCATGTGAC CGTATTCAATGCTCGAATTGAACCAGGTGACTGTTAAATATATTCTGATTGTATTCATAA ATTGTGTATACTACAATACCATTTACAAAACCATCGCCATATCCTTTTTGATGTGGTTTA TTAGAGCGAATCAAAATGTATACATGAAGCTACAATCCCACCAAAGCGCATCACATTCCC CACCAAAGAATCTCCGGCCTTGAAACAATTTTCAGAAACATCATGTACTCTATACAGATT TTCTATTTAAAGGTTTCAACAACAAAGCGTCTTCTTCAACGAGGTACATTATATTGAAAG CATGCAATGTAACAAACCATAGAAAATTAAATCAACAGTGATCGCAATAACGGTATTAGT TCGAAATCCCATAGTGGTTTGAAGTATCTTCCCAATCCTGT



consensusID : consensus_6488#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 535
fasta sequence
                              [CCGGAATATTTGTCTGCGGATAGTCTGTAGCGTGTCTAGTTTGTGCACATAGCATTTAGAGTATTTTATTAGAAAATTTATTGTTTATCCAGTAGTGTGATTAGTTCAACGCGTTTTAATCAATCACACCGAGGCAACAGTTTTATTCGCTTTTGCGTAAGGATACACCGTAACAAAGCTGCAAAGTGTACCACGGGGTGAAACCTAGGGCATCAAGGGATACGAAGTGAATGAGCCTAGGTAGAGGTTTCCTGCAATCCTGCCGATTCAGATTTGTGCGGTGAGAGTCTGTACTAGAGTCATCAGGGGGCTGGTTCATTCATCTTCACTAAAAACACCGGAGAGCAGCTATTACCTGCCATCTAACTACGTCAAAATGCGCGTGGAAATGAATCTGGATGTTCAGCACTGTCACGATGATATCGACACGAAAATAGCAGAGTTCAAGCAAGATGCGAACAAAATGAACGAGCTTAACCTTTTCCTTGACAGTGTGCTGGAAGAGGCGCAGAGGGAATGCGGAAGTGAAACTGCA]

[+] EMBL BM610742             [CCGGAATATTTGTCTGCGGATAGTCTGTAGCGTGTCTAGTTTGTGCACATAGCATTTAGAGTATTTTATTAGAAAATTTATTGTTTATCCAGTAGTGTGATTAGTTCAACGCGTTTTAATCAATCACACCGAGGCAACAGTTTTATTCGCTTTTGCGTAAGGATACACCGTAACAAAGCTGCAAAGTGTACCACGGGGTGAAACCTAGGGCATCAAGGGATACGAAGTGAATGAGCCTAGGTAGAGGTTTCCTGCAATCCTGCCGATTCAGATTTGTGCGGTGAGAGTCTGTACTAGAGTCATCAGGGGGCTGGTTCATTCATCTTCACTAAAAACACCGGAGAGCAGCTATTACCTGCCATCTAACTACGTCAAAATGCGCGTGGAAATGAATCTGGATGTTCAGCACTGTCACGATGATATCGACACGAAAATAGCAGAGTTCAAGCAAGATGCGAACAAAATGAACGAGCTTAACCTTTTCCTTGACAGTGTGCTGGAAGAGGCGCAGAGGGAATGCGGAAGTGAAACTGCA]


>consensus_6488#3 CCGGAATATTTGTCTGCGGATAGTCTGTAGCGTGTCTAGTTTGTGCACATAGCATTTAGA GTATTTTATTAGAAAATTTATTGTTTATCCAGTAGTGTGATTAGTTCAACGCGTTTTAAT CAATCACACCGAGGCAACAGTTTTATTCGCTTTTGCGTAAGGATACACCGTAACAAAGCT GCAAAGTGTACCACGGGGTGAAACCTAGGGCATCAAGGGATACGAAGTGAATGAGCCTAG GTAGAGGTTTCCTGCAATCCTGCCGATTCAGATTTGTGCGGTGAGAGTCTGTACTAGAGT CATCAGGGGGCTGGTTCATTCATCTTCACTAAAAACACCGGAGAGCAGCTATTACCTGCC ATCTAACTACGTCAAAATGCGCGTGGAAATGAATCTGGATGTTCAGCACTGTCACGATGA TATCGACACGAAAATAGCAGAGTTCAAGCAAGATGCGAACAAAATGAACGAGCTTAACCT TTTCCTTGACAGTGTGCTGGAAGAGGCGCAGAGGGAATGCGGAAGTGAAACTGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6488#0      ------------------------------------------------------------
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      CCGGCGGCCAGCTACAGCACCGGCTAACGTTGGATCTACTTCGAAAAACTAAACAACTGG 60
consensus_6488#1      CAAGAATCCGCACGATGGAGTTTATTAGAGCGAATCAAAACTGTATACATGAAGCTACAA 60
                                                                                  

consensus_6488#0      ---------------------------CCGGAATATTT---GTCTGCGGATAGTCTGTAG 30
consensus_6488#3      ---------------------------CCGGAATATTT---GTCTGCGGATAGTCTGTAG 30
consensus_6488#2      TACTATCTTCAAGCTGTCATCCCACTGGTACTATATGT---AACTACAAACAGCAAACAA 117
consensus_6488#1      TCCCACCAAAGCGCATCACATTCCCCACCAAAGAATCTCCGGCCTTGAAACAATTTTCAG 120
                                                        ** *     **    * *      * 

consensus_6488#0      CGTGTCTAGTTTGTGCACATAGCATTTAGA-----GTATTTTATTAG-AAAATTTATTGT 84
consensus_6488#3      CGTGTCTAGTTTGTGCACATAGCATTTAGA-----GTATTTTATTAG-AAAATTTATTGT 84
consensus_6488#2      --TAACGAGTTACCG-ACCCAGTACTTCGGTATGGATGTGTTGTCGT-ATGTTTTATCAT 173
consensus_6488#1      AAACATCATGTACTCTATACAGATTTTCTATTTAAAGGTTTCAACAACAAAGCGTCTTCT 180
                             *  *     *   **   **           * *       *     * *  *

consensus_6488#0      TTATCCAGTAGTGTGAT-TAGTT-CAACGCG---TTTTAATC---AATCACACTGAGGCA 136
consensus_6488#3      TTATCCAGTAGTGTGAT-TAGTT-CAACGCG---TTTTAATC---AATCACACCGAGGCA 136
consensus_6488#2      CAAAATAGGCAGACTAT-TCGTAGCAATGGGAAATGTTGGTCCTAAATCGAGTTACACTG 232
consensus_6488#1      TCAACGAGGTACATTATATTGAAAGCATGCAATGTAACAAACC-ATAGAAAATTAAATCA 239
                        *   **       ** * *     * *     *      *    *             

consensus_6488#0      ACAGTTTTATTCGCTTTTGCGTAAGGATACACCGTAACAA--AGCTGCAAAGTGTAC--- 191
consensus_6488#3      ACAGTTTTATTCGCTTTTGCGTAAGGATACACCGTAACAA--AGCTGCAAAGTGTAC--- 191
consensus_6488#2      ACTGTTTATCGAGCTTTTTTTTACACTTCTATTTTTCCAACCACACACAAACTCAATATT 292
consensus_6488#1      ACAGTGATCGCAATAACGGTATTAGTTCGAAATCCAATAAT-GTTTTGAAAGTATCTTCC 298
                      ** **                *        *       **        *** *       

consensus_6488#0      CA-CGGGGTGAAACCTAG---GGCATCAAGGGATACGAAGTGAATG---AG----CCTAG 240
consensus_6488#3      CA-CGGGGTGAAACCTAG---GGCATCAAGGGATACGAAGTGAATG---AG----CCTAG 240
consensus_6488#2      CA-TGTGACCGTATTCAA---TGC-TCGAATTGAACCAGGTGACTGTTAAA----TATAT 343
consensus_6488#1      CAATCCTGTGCTCCCTAGCAATGCAGCATTATCCATAAATCTAAAACTAAAAAATTATTT 358
                      **              *     **  *       *  *    *      *       *  

consensus_6488#0      -----------------------------------------------TCTGTACTA---- 249
consensus_6488#3      GTAGAGGTTTCCTGCAATCCTGCCGATTCAGATTTGTGCGGTGAGAGTCTGTACTA---- 296
consensus_6488#2      TCTGATTGTATTCATAAATTGTGTATACTACAATACCATTTACAAAACCATCGCCA---- 399
consensus_6488#1      TTGCAGAAACCGGAAAAACACGCACATTAAAGATTCAAACAATAAATACGGTAGCAAGTT 418
                                                                      *      *    

consensus_6488#0      -GAGTCATCAGGGGGCTGGTTCATTCATCTTCACTAAAAACACCGGAGAGCAGCT--ATT 306
consensus_6488#3      -GAGTCATCAGGGGGCTGGTTCATTCATCTTCACTAAAAACACCGGAGAGCAGCT--ATT 353
consensus_6488#2      -TATCCTTTTTGATG-TGGTTTATT-AGAGCGAATCAAAATGTATACATGAAGCT--ACA 454
consensus_6488#1      TGATCCTTAAAGGCAATTTTTAATTAAAAATATGCCATAATTTTACAAAGGAACTTGATG 478
                        *  * *   *    *  ** *** *         * **         * * **  *  

consensus_6488#0      ACCTGCCATCTAACTACGTCAAAATGCGCGTGGAAATGAATCTGGATGTTCAGCACTGT- 365
consensus_6488#3      ACCTGCCATCTAACTACGTCAAAATGCGCGTGGAAATGAATCTGGATGTTCAGCACTGT- 412
consensus_6488#2      ATC--CCACCAAAGCGCATCACATTCCCCACCAAAGAATCTCCGGCCTTGAAACAATTTT 512
consensus_6488#1      ATTTATTCACATGGTTTGTAATAGCAATTCAAAAATTCAAATGCGTTAAAAAAAACCAAC 538
                      *        *        * * *          **         *      *  *     

consensus_6488#0      ------CACGATGATATCGACACGAAA-----ATAGCAGAGTTCAAGCAAGATGCGAACA 414
consensus_6488#3      ------CACGATGATATCGACACGAAA-----ATAGCAGAGTTCAAGCAAGATGCGAACA 461
consensus_6488#2      CAGAAACATCATGTACTCTATACAGATTTTCTATTTAAAGGTTTCAACAACAAAGCGTCT 572
consensus_6488#1      AATTGTTCGAATGTGTCGTAAACCATTTGTCTATTTCGTTGTTTCATTAGACTTGAGGGA 598
                                ***      * **         **      ***  *  *           

consensus_6488#0      AAATGAACGAGCTTAACCTTTTCCTTGACAGTGTGC--TGGAAGAGGCGCAGAGG-AATG 471
consensus_6488#3      AAATGAACGAGCTTAACCTTTTCCTTGACAGTGTGC--TGGAAGAGGCGCAGAGGGAATG 519
consensus_6488#2      TCTTCAACGAGGTACA---TTATATTGAAAGCATGCAATGTAACAAAC-CATAGAAAATT 628
consensus_6488#1      CAATCAA--AATTATGACGCAATATTTACAGCCAATTAAAAAACCTTCGTAGAGAAAACG 656
                         * **  *  *           ** * **          **    *  * **  **  

consensus_6488#0      CGG--AAGTGAAACTGCAAAGCAAATTGGATGATGAGCGACCTAAAAATGGAAACAAACT 529
consensus_6488#3      CGG--AAGTGAAACTGCA------------------------------------------ 535
consensus_6488#2      AAATCAACAGTGATCGCAATAACGGTATTAGTTCGAAATCCCATAGTGGTTTGAAGTATC 688
consensus_6488#1      GGTTGGAACAAAATTCTTCAACCAAAATCTTTCTAAGCATTTTGACGGTTGANAGTACCA 716
                            *     *                                               

consensus_6488#0      TCTCAGCGGCATAAAGCAACACAGAATGGTGACACGCCCTTAAGGGGGATTGTTTTACGA 589
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      TTCCCAATCCTGT----------------------------------------------- 701
consensus_6488#1      GGGTTACTTTGGAANCCAATTTTACTTGAAAACACAAAAGAGGTTTTTCAGNAGGATTTC 776
                                                                                  

consensus_6488#0      ATCTTTGAAGCTATTTGTAACTGCACAAACTCCGCCACTATACCAGGGCAGCGGCCAGCT 649
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      CCAGGTTCCGGTNATTCTNGGTACGGAATCCTGGTCACTGGTGGTAGGTGGCCAACCAAG 836
                                                                                  

consensus_6488#0      ACAGCACCGGCTCAACGTTGGATCTACTTCGAAAAACTAAACAACTGGTACTATCTTCAA 709
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      GGGGAGTTGAAANATCNGGGGGTANAGAGCCATTTCGGACGAANGNAGCACNAGG----- 891
                                                                                  

consensus_6488#0      GCTGTCATCCCACTGGTACTATATTTAACTACAAACAGCAAACAATAACGAGTTACCGAC 769
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      CCAGTACGTCGGTATGGATGTGTTGTCGTATGTTTTATCATCAAAATAGGCAGACTATTC 829
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      GTAGCAATGGGAAATGTTGGTCCTAAATCGAGTTACACTGACTGTTTATCGAGCTTTTTT 889
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      TTACACTTCTATTTTTCCAAACCACACACAAACTCAATATTCATGTGACCGTATTCAATG 949
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      CTCGAATTGAACCAGGTGACTGTTAAATATATTCTGATTGTATTCATAAACTTGTGTATA 1009
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      CTACAATACCATTTACAAAACCATCGCCTTATCCTTTNTGATGTGGTTTACTTAGAGCGA 1069
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      ATCAAATGTATACATGAAGCTAACAATCCCACCAAAGCGCATCACATTCCCCAGCAAAGA 1129
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      ATCTCCGGCCTTTAAACAATTTTCAGAAACAGTTCATGTTAACTCTAATACCGATTTCCT 1189
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      ANTTTTAACAGGGTTTCAAACAACCAAAGCGTTCTTTCCTTTCCACAACGAAAGGGTTAC 1249
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      CATTCGNATTTCATTTTGCAACAAGGCGCTTCANTTGGTTAACAAAAAGCCCAATTTNGA 1309
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      ANAACTTTTGACATCCAACCCAGNTAATTCCNCGAAAATATACCCGGGNTTTTNGAATTT 1369
consensus_6488#3      ------------------------------------------------------------
consensus_6488#2      ------------------------------------------------------------
consensus_6488#1      ------------------------------------------------------------
                                                                                  

consensus_6488#0      CCGGAAAATCCCNCAAATTATTCGTTCTTCAAANAGA 1406
consensus_6488#3      -------------------------------------
consensus_6488#2      -------------------------------------
consensus_6488#1      -------------------------------------
                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)