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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6526#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1132 fasta sequence
[CCGGTCGCCCATTACCGTTTCTCCCCTTCCGTTCGCCGTACAACGTCATCAAGTGTCGCGCAGTAGCCTGCAAAGTTCATCCGCCTGGTGTCTGTGTAATTCCGCTGTAATTCCGGATTCGTTCGCAAAAGGCGCAGTAAACAACCGCAGTAAAGATGGCCGGTGCTAATCCATTCCAGAGTTTGCTGAAGGAGATCAACGTCAATGGCGAAACATTCCACTATTTCGACATTGCCTCATTCCCGGAGTATCGCGAACTTCCGTACAGTGTGCGCGTGCTGCTCGAGTCGGCCGTCCGGAACTGCGACAACTTCCAGGTGCTGGAAAAGGACGTGCGGGGCATCCTGCGATGGAAGCAGCTGAAGGGTACGCCGACCTCCGACGACGAGCTGGAGATCCCGTTCAAGCCGGCCCGCGTCATCCTGCAGGACTTTACCGGCGTCCCGGCGGTGGTCGATTTTGCGGCCATGCGTGACGCCGTGCTGAAGCTGGGCGGCGACCCCGACCGCATCAATCCCATCTGCCCGTCCGATCTGGTGATCGACCACTCGGTGCAGGTGGACTTTGCGCGCAGCGAGGACGCGCTGGCCAAGAATCAGGATCTGGAGTTCGAGCGCAACAAGGAGCGGTTCACGTTTCTGAAGTGGGGAGCGAAGGCGTTCAACAACATGCTCATCATTCCGCCCGGCTCGGGCATCGTGCACCAGGTCAATCTGGAGTATTTGGCGCGCGTCGTGTTTCAGGACGCGGCGAAGGAGGGCGCAACGCGGATGCTGTACCCGGACAGTGTCGTCGGTACGGACTCGCACACCACCATGATCAATGGGCTCGGTGTGGTGGGATGGGGTGTCGGTGGCATCGAGGCCGAGGCGGTTATGCTCGGTCAGGCGATCTCGATGCTGCTGCCGGAGGTGATCGGCTACAAGCTGGTGGGCAAGCTGAACCCGCTCGTCACGTCCACCGATCTTGTGCTGACCATCACGAAGCATCTGCGCCAGATCGGTGTGGGTGGGGAAGTTCGTTGAGTTCTTTGGCCCGGGCGTGAGCGAGCTGTCCATTGCGGATCGGGCCACCATCAGCAACATGTGCCCGGAGTACGGTGCCACGGTCGGTTATTTCCCGGTGGATAAGA]
[+] EMBL BM648347 [CCGGTCGCCCATTACCGTTTCTCCCCTTCCGTTCGCCGTACAACGTCATCAAGTGTCGCGCAGTAGCCTGCAAAGTTCATCCGCCTGGTGTCTGTGTAATTCCGCTGTAATTCCGGATTCGTTCGCAAAAGGCGCAGTAAACAACCGCAGTAAAGATGGCCGGTGCTAATCCATTCCAGAGTTTGCTGAAGGAGATCAACGTCAATGGCGAAACATTCCACTATTTCGACATTGCCTCATTCCCGGAGTATCGCGAACTTCCGTACAGTGTGCGCGTGCTGCTCGAGTCGGCCGTCCGGAACTGCGACAACTTCCAGGTGCTGGAAAAGGACGTGCGGGGCATCCTGCGATGGAAGCAGCTGAAGGGTACGCCGACCTCCGACGACGAGCTGGAGATCCCGTTCAAGCCGGCCCGCGTCATCCTGCAGGACTTTACCGGCGTCCCGGCGGTGGTCGATTTTGCGGCCATGCGTGACGCTGTGCTGAAGCTGGGCGGCGACCCCGACCGCATCAATCCCATCTGCCCGTCCGATCTGGTGATCGACCACTCGGTGCAGGTGGACTTTGCGCGCAGCGAGGACGCGCTGGCCAAGAATCAGGATCTGGAGTTCGAGCGCAACAAGGAGCGGTTCACGTTTCTGAAGTGGGGAGCGAAGGCGTTCAACAACATGCTCA ]
[+] EMBL BM586055 [ ccgCTGCAAAGTTCATCCGCCTGGTGTCTGTGTAATTCCGCTGTAATTCCGGATTCGTTCGCAAAAGGCGCAGTAAACAACCGCAGTAAAGATGGCCGGTGCTAATCCATTCCAGAGTTTGCTGAAGGAGATCAACGTCAATGGCGAAACATTCCACTATTTCGACATTGCCTCATTCCCGGAGTATCGCGAACTTCCATACAGTGTGCGCGTGCTGCTCGAGTCGGCCGTCCGGAACTGCGACAACTTCCAGGTGCTGGAAAAGGATGTGCGGGGCATCCTGCGCTGGAAGCAGCTGAAGGGTACGCCGACCTCCGACGACGAGCTGGAGATCCCGTTCAAGCCGGCCCGCGTCATCCTGCAGGACTTTACCGGCGTCCCGGCGGTGGTCGATTTTGCGGCCATGCGTGACGCCGTGCTGAAGCTGGGCGGCGACCCCGACCGCATCAATCCCATCTGCCCGTCCGATCTGGTGATCGACCACTCGGTGCAGGTGGACTTTGCGCGCAGCGAGGACGCGCTGGCCAAGAATCAGGATCTGGAGTTCGAGCGCAACAAGGAGCGGTTCACGTTTCTGAAGTGGGGAGCGAAGGCGTTCAACAACATGCTCATCATTCCGCCCGGCTCGGGCATCGTG ]
[+] EMBL BM616455 [ ccgcaCCTGGTGTCTGTGTAATTCCGCTGTAATTCCGGATTCGTTCGCAAAAGGCGCAGTAAACAACCGCAGTAAAGATGGCCGGTGCTAATCCATTCCAGAGTTTGCTGAAGGAGATCAACGTCAATGGCGAAACATTCCACTATTTCGACATTGCCTCATTCCCGGAGTATCGCGAACTTCCGTACAGTGTGCGCGTGCTGCTCGAGTCGGCCGTCCGGAACTGCGACAACTTCCAGGTGCTGGAAAAGGACGTGCGGGGCATCCTGCGATGGAAGCAGCTGAAGGGTACGCCGACCTCCGACGACGAGCTGGAGATCCCGTTCAAGCCGGCCCGCGTCATCCTGCAGGACTTTACCGGCGTCCCGGCGGTGGTCGATTTTGCGGCCATGCGTGACGCCGTGCTGAAGCTGGGCGGTGACCCCGACCGCATCAATCCCATCTGCCCGTCCGATCTGGTGATCGACCACTCGGTGCAGGTGGACTTTGCGCGCAGCGAGGACGCGCTGGCCAAGAATCAGGATCTGGAGTTCGAGCGCAACAAGGAGCGGTTCACGTTTCTGAAGTGGGGAGCGAAGGCGTTCAACAACATGCTCATCATTCCGCCCGGCTCGGGCATCGTGCACCAGGTCAATCTGGAGTATTTGGCGCGCGTCGTGTTTCAGGACGCGGCGAAGGAGGGCGCAA ]
[+] EMBL BM605121 [ cCGCGCAGCGAGGACGCGCTGGCCAAGAATCAGGATCTGGAGTTCGAGCGCAACAAGGAGCGGTTCACGTTTCTGAAGTGGGGAGCGAAGGCGTTCAACAACATGCTCATCATTCCGCCCGGCTCGGGCATCGTGCACCAGGTCAATCTGGAGTATTTGGCGCGCGTCGTGTTTCAGGACGCGGCGAAGGAGGGCGCAACGCGGATGCTGTACCCGGACAGTGTCGTCGGTACGGACTCGCACACCACCATGATCAATGGGCTCGGTGTGGTGGGATGGGGTGTCGGTGGCATCGAGGCCGAGGCGGTTATGCTCGGTCAGGCGATCTCGATGCTGCTGCCGGAGGTGATCGGCTACAAGCTGGTGGGCAAGCTGAACCCGCTCGTCACGTCCACCGATCTTGTGCTGACCATCACGAAGCATCTGCGCCAGATCGGTGTGGGTGGGGAAGTTCGTTGAGTTCTTTGGCCCGGGCGTGAGCGAGCTGTCCATTGCGGATCGGGCCACCATCAGCAACATGTGCCCGGAGTACGGTGCCACGGTCGGTTATTTCCCGGTGGATAAGA]
consensusID : consensus_6526#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCGTTTCTCCCCTTCCGTTCGCCGTACAACGTCATCAAGTGTCGCGCAGTAGCCTGCAAAGTTCATCCGCCTGGTGTCTGTGTAATTCCGCTGTAATTCCGGATTCGTTCGCAAAAGGCGCAGTAAACAACCGCAGTAAAGATGGCCGGTGCTAATCCATTCCAGAGTTTGCTGAAGGAGATCAACGTCAATGGCGAAACATTCCACTATTTCGACATTGCCTCATTCCCGGAGTATCGCGAACTTCCGTACAGTGTGCGCGTGCTGCTCGAGTCGGCCGTCCGGAACTGCGACAACTTCCAGGTGCTGGAAAAGGACGTGCGGGGCATCCTGCGATGGAAGCAGCTGAAGGGTACGCCGACCTCCGACGACGAGCTGGAGATCCCGTTCAAGCCGGCCCGCGTCATCCTGCAGGACTTTACCGGCGTCCCGGCGGTGGTCGATTTTGCGGCCATGCGTGACGCTGTGCTGAAGCTGGGCGGCGACCCCGACCGCATCA]
[+] EMBL BM641838 [CCGCCCACGCGTCCGCCCACGCGTCCGCCGTTTCTCCCCTTCCGTTCGCCGTACAACGTCATCAAGTGTCGCGCAGTAGCCTGCAAAGTTCATCCGCCTGGTGTCTGTGTAATTCCGCTGTAATTCCGGATTCGTTCGCAAAAGGCGCAGTAAACAACCGCAGTAAAGATGGCCGGTGCTAATCCATTCCAGAGTTTGCTGAAGGAGATCAACGTCAATGGCGAAACATTCCACTATTTCGACATTGCCTCATTCCCGGAGTATCGCGAACTTCCGTACAGTGTGCGCGTGCTGCTCGAGTCGGCCGTCCGGAACTGCGACAACTTCCAGGTGCTGGAAAAGGACGTGCGGGGCATCCTGCGATGGAAGCAGCTGAAGGGTACGCCGACCTCCGACGACGAGCTGGAGATCCCGTTCAAGCCGGCCCGCGTCATCCTGCAGGACTTTACCGGCGTCCCGGCGGTGGTCGATTTTGCGGCCATGCGTGACGCTGTGCTGAAGCTGGGCGGCGACCCCGACCGCATCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6526#0 ------------CCGGTCGCCCATT-ACCGTTTCTCCCCTTCCGTTCGCCGTACAACGTC 47
consensus_6526#1 CCGCCCACGCGTCCGCCCACGCGTCCGCCGTTTCTCCCCTTCCGTTCGCCGTACAACGTC 60
*** * * * * *********************************
consensus_6526#0 ATCAAGTGTCGCGCAGTAGCCTGCAAAGTTCATCCGCCTGGTGTCTGTGTAATTCCGCTG 107
consensus_6526#1 ATCAAGTGTCGCGCAGTAGCCTGCAAAGTTCATCCGCCTGGTGTCTGTGTAATTCCGCTG 120
************************************************************
consensus_6526#0 TAATTCCGGATTCGTTCGCAAAAGGCGCAGTAAACAACCGCAGTAAAGATGGCCGGTGCT 167
consensus_6526#1 TAATTCCGGATTCGTTCGCAAAAGGCGCAGTAAACAACCGCAGTAAAGATGGCCGGTGCT 180
************************************************************
consensus_6526#0 AATCCATTCCAGAGTTTGCTGAAGGAGATCAACGTCAATGGCGAAACATTCCACTATTTC 227
consensus_6526#1 AATCCATTCCAGAGTTTGCTGAAGGAGATCAACGTCAATGGCGAAACATTCCACTATTTC 240
************************************************************
consensus_6526#0 GACATTGCCTCATTCCCGGAGTATCGCGAACTTCCGTACAGTGTGCGCGTGCTGCTCGAG 287
consensus_6526#1 GACATTGCCTCATTCCCGGAGTATCGCGAACTTCCGTACAGTGTGCGCGTGCTGCTCGAG 300
************************************************************
consensus_6526#0 TCGGCCGTCCGGAACTGCGACAACTTCCAGGTGCTGGAAAAGGACGTGCGGGGCATCCTG 347
consensus_6526#1 TCGGCCGTCCGGAACTGCGACAACTTCCAGGTGCTGGAAAAGGACGTGCGGGGCATCCTG 360
************************************************************
consensus_6526#0 CGATGGAAGCAGCTGAAGGGTACGCCGACCTCCGACGACGAGCTGGAGATCCCGTTCAAG 407
consensus_6526#1 CGATGGAAGCAGCTGAAGGGTACGCCGACCTCCGACGACGAGCTGGAGATCCCGTTCAAG 420
************************************************************
consensus_6526#0 CCGGCCCGCGTCATCCTGCAGGACTTTACCGGCGTCCCGGCGGTGGTCGATTTTGCGGCC 467
consensus_6526#1 CCGGCCCGCGTCATCCTGCAGGACTTTACCGGCGTCCCGGCGGTGGTCGATTTTGCGGCC 480
************************************************************
consensus_6526#0 ATGCGTGACGCCGTGCTGAAGCTGGGCGGCGACCCCGACCGCATCAATCCCATCTGCCCG 527
consensus_6526#1 ATGCGTGACGCTGTGCTGAAGCTGGGCGGCGACCCCGACCGCATCA-------------- 526
*********** **********************************
consensus_6526#0 TCCGATCTGGTGATCGACCACTCGGTGCAGGTGGACTTTGCGCGCAGCGAGGACGCGCTG 587
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 GCCAAGAATCAGGATCTGGAGTTCGAGCGCAACAAGGAGCGGTTCACGTTTCTGAAGTGG 647
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 GGAGCGAAGGCGTTCAACAACATGCTCATCATTCCGCCCGGCTCGGGCATCGTGCACCAG 707
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 GTCAATCTGGAGTATTTGGCGCGCGTCGTGTTTCAGGACGCGGCGAAGGAGGGCGCAACG 767
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 CGGATGCTGTACCCGGACAGTGTCGTCGGTACGGACTCGCACACCACCATGATCAATGGG 827
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 CTCGGTGTGGTGGGATGGGGTGTCGGTGGCATCGAGGCCGAGGCGGTTATGCTCGGTCAG 887
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 GCGATCTCGATGCTGCTGCCGGAGGTGATCGGCTACAAGCTGGTGGGCAAGCTGAACCCG 947
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 CTCGTCACGTCCACCGATCTTGTGCTGACCATCACGAAGCATCTGCGCCAGATCGGTGTG 1007
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 GGTGGGGAAGTTCGTTGAGTTCTTTGGCCCGGGCGTGAGCGAGCTGTCCATTGCGGATCG 1067
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 GGCCACCATCAGCAACATGTGCCCGGAGTACGGTGCCACGGTCGGTTATTTCCCGGTGGA 1127
consensus_6526#1 ------------------------------------------------------------
consensus_6526#0 TAAGA 1132
consensus_6526#1 -----
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||