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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6622#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1223 fasta sequence
[TAAATCAACCCACACAGACACATATAGCTGGGTTGTACGATCAAATTCTCCTTTCTCATCACTCCCTACTAGGTCTAGTTTCCGTTTTTATTACGTTTTAATGAAGAAGATTAATGCGTGTCGCTACTCTCCTGCAGCACCACACCGGAGAGACACAACGCTCCTTTTGGCACAGTTTATTTCGTCGATGACTATTTTCAAATTATCCCTCCCCAGGCCCAACCAGCAGATTAAAAACAAAAACAAACAAACAAACAAAAAGCTAAAATCGTTTCGCAATCTTTATGATTGCAAAACACAGAAAGCACGTTAACAACATACACAACTGAAAAAGCAAAGGATGAAACAAAACAAAAAACGACTCAAAACACACAACGAAATACACATTAACACTGCCCAACCCGTCCTCTCATCTTCATTCTGAAGTCATTCTTTGGCCACAGTATCTCTTGGGAGATTGAGTACCGCACGGGAGGACAATTGCCCGCGCTGCTTCAGTCCTGGTCTCTGAGTGCCCGGGGGTATGAGTGTAGTAATTAAATCTTAAACAGTAAAATCATTTGGCCTAAATTGATTGCGAGTAAAACAAACTGTCCCGTTCTTCCTACAAGCTAAAACACAACCAAAAGGTATGATAGAGACCACCAGTCACCAGTCTCTTTTGCTATTCTGTGCCCAATGCATGACCGAAAATCGGTTTGCATAAAACAAAAACTCTCCCCCCACTAACGTATGATGAAGATGCAGCGAAATATACAAAATAGAAATCTATAGTTACCACAGGGCTTTCGTCTACGTTACACTACTTCTGCCATGCTTGCTTAGGAAAATATAAACATAAAATAAAATATACACTTAAATTCACGGCGAGGAGATTCTACTTCCGTTTCACTGATCCTGCAGTAGTATTATTCTGTGCTTTTGCTAGAGCATTCACAGTAAATCGACACGTACGTACAACGCTTACATTTTCAAACCCGTGAAATTCAAACTCCTCTCTCCTGAGACAAGCCCCTTTAAGCTTCCATCGAGCGACGAATCGATTACTACGGGGCACTCGCACTGGGGTATGATTTGGTTTAGGTAGAGTATTTGATGGTTTTCGCAGATGCCGCTCACCGCTCGAAATCGAATATGGACCCAATCCAGCCTAACAGTGAGATCCGATACCTTGAGTAATCGAGTTTTCCAACACGATGTGAAATTCGTCCAGCGGTTCCAGT]
[-] EMBL BX612931 [TAAATCAACCCACACAGACACATATAGCTGGGTTGTACGATCAAATTCTCCTTTCTCATCACTCCCTACTAGGTCTAGTTTCCGTTTTTATTACGTTTTAATGAAGAAGATTAATGCGTGTCGCTACTCTCCTGCAGCACCACACCGGAGAGACACAACGCTCCTTTTGGCACAGTTTATTTCGTCGATGACTATTTTCAAATTATCCCTCCCCAGGCCCAACCAGCAGATTAAAAACAAAAACAAACAAACAAACAAAAAGCTAAAATCGTTTCGCAATCTTTATGATTGCAAAACACAGAAAGCACGTTAACAACATACACAACTGAAAAAGCAAAGGATGAAACAAAACAAAAAACGACTCAAAACACACAACGAAATACACATTAACACTGCCCAACCCGTCCTCTCATCTTCATTCTGAAGTCATTCTTTGGCCACAGTATCTCTTGGGAGATTGAGTACCGCACGGGAGGACAATTGCCCGCGCTGCTTCAGTCCTGGTCTCTGAGTGCCCGGGGGTATGAGTGTAGTAATTAAATCTTAAACAGTAAAATCATTTGGCCTAAATTGATTGCGAGTAAAACAAACTGTCCCGTTCTTCCTACAAGCTAAAACACAACCAAAAGGTATGATAGAGACCAC ]
[-] EMBL BX611482 [ AATCTTAAACAGTAAAATCATTTGGCCTAAATTGATTGCGAGTAAAACAAACTGTCCCGTTCTTCCTACAAGCTAAAACACAACCAAAAGGTATGATAGAGACCACCAGTCACCAGTCTCTTTTGCTATTCTGTGCCCAATGCATGACCGAAAATCGGTTTGCATAAAACAAAAACTCTCCCCCCACTAACGTATGATGAAGATGCAGCGAAATATACAAAATAGAAATCTATAGTTACCACAGGGCTTTCGTCTACGTTACACTACTTCTGCCATGCTTGCTTAGGAAAATATAAACATAAAATAAAATATACACTTAAATTCACGGCGAGGAGATTCTACTTCCGTTTCACTGATCCTGCAGTAGTATTATTCTGTGCTTTTGCTAGAGCATTCACAGTAAATCGACACGTACGTACAACGCTTACATTTTCAAACCCGTGAAATTCAAACTCCTCTCTCCTGAGACAAGCCCCTTTAAGCTTCC ]
[-] EMBL BM574938 [ ACCAGTCACCAGTCTCTTTTGCTATTCTGTGCCCAATGCATGACCGAAAATCGGTTTGCATAAAACAAAAACTCTCCCCCCACTAACGTATGATGAAGATGCAGCGAAATATGCAAAATAGAAATCTATAGTTGCCACAGGGCTTTCGTCTACGTTACACTACTTCTGCCATGCTTGCTTAGGAAAATATAAACATAAAATAAAATATACACTTAAATTCACGGTGAGGAGATTCTACTTCCGTTTCACTGATCCTGCAGTAGTATTATTCTGTGCTTTTGCTAGAGCATTCACAGTAAATCGACACGTACGTACAACGCTTACATTTTCAAACCCGTGAAATTCAAACTCCTCTCTCATGAGACAAGCCCCTTTAAGCTTCCATCGAGCGACGAATCGATTACTACGG ]
[+] EMBL AGA284243 [ ttttttTTCCGTTTCACTGATCCTGCAGTAGTATTATTCTGTGCTTTTGCTAGAGCATTCACAGTAAATCGACACGTACGTACAACGCTTACATTTTCAAACCCGTGAAATTCAAACTCCTCTCTCCTGAGACAAGCCCCTTTAAGCTTCCATCGAGCGACGAATCGATTACTACGCGGCACTCGCACTGGGGTATGATTTGGTTTAGGTAGAGTATTTGATGGTTTTCGCAGATGCCGCTCACCGCTCGAAATCGAATATGGACCCAATCCAGCCTAACAGTGAGATCCGATACCTTGAGTAATCGAGTTTTCCAACACGATGTGAAATTCGTCCAGCGGTTCCAGT]
consensusID : consensus_6622#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 912 fasta sequence
[GGTTTACTNATGTGTNTGAAGTAGTTGCGGGNTAGTAGTGTGATAAAGGTAAATGTATTGTAATAATGTTGGTCCGCTTTTGGGTGCCTAGGACCATTGGAACNCATTTGCTTTTCCNTCTTGTGGCCAAACGGTCCTANACCCNTCCTAACCAAATNCCCAGCCGGCGGTAATGGTAAGGGTAACCCTAGCGTATTGAAGCGGGTCCGATTAGCCACCATGATGTTGTTGGGGNGGCCATAATCCCTTAGTGGTTTTGGTTAATTGTTGTGACGAGTTCNGGAATTGGGANCTTTAATTTTTTTTCCATATAGAGTGTTATTCCGCGCTTTCCGCGGCCAAGGTGCCCTCCGCTAAGCGCANNAGCCAATAGGGTATTTTTAGAAGGTANCCGATATGTNTGATGAGTGACGTTGTGNCCTGTGTTNACTATGTCACAGTGTAGATAGGNCTGTTGATAGTATANTTCCCAGTGNTTCGGCCAAATTTTTTAATGGGATTTTGCCAATATGTACCACCTAGGTATATAGCCAACCGTTTAGACATACCAATTAGCTACCNAGAACTTGGTNATATATTAGCCAATAAGGGGTATTGAAACCGTGGNCGGGNANCGAGATTATATACCGACTCAGTGTAACACACAACGAAACCAACAATTAACACTTCCCATACCACGTCCTTTCATCATCATTCTGAAGTCATTCTTTGGCNCACAAGTATCTCTTGGGAGATTGAGAGATTGAGTACCGCACGGAAGGACCAGATCGCCATGTAATCGTTCGCCCCTGCTTCAGTCCGTGTCTCTGAGTGCCCGGGGGTATGTGTGTAGTAATTAAACCTTAGAACAGTAAAATCATTTGGCCTAAATTGATTGCGTGTAAAACAACTGTCANCCTCGGGCAATTCTGC]
[-] EMBL AL931132 [GGTTTACTNATGTGTNTGAAGTAGTTGCGGGNTAGTAGTGTGATAAAGGTAAATGTATTGTAATAATGTTGGTCCGCTTTTGGGTGCCTAGGACCATTGGAACNCATTTGCTTTTCCNTCTTGTGGCCAAACGGTCCTANACCCNTCCTAACCAAATNCCCAGCCGGCGGTAATGGTAAGGGTAACCCTAGCGTATTGAAGCGGGTCCGATTAGCCACCATGATGTTGTTGGGGNGGCCATAATCCCTTAGTGGTTTTGGTTAATTGTTGTGACGAGTTCNGGAATTGGGANCTTTAATTTTTTTTCCATATAGAGTGTTATTCCGCGCTTTCCGCGGCCAAGGTGCCCTCCGCTAAGCGCANNAGCCAATAGGGTATTTTTAGAAGGTANCCGATATGTNTGATGAGTGACGTTGTGNCCTGTGTTNACTATGTCACAGTGTAGATAGGNCTGTTGATAGTATANTTCCCAGTGNTTCGGCCAAATTTTTTAATGGGATTTTGCCAATATGTACCACCTAGGTATATAGCCAACCGTTTAGACATACCAATTAGCTACCNAGAACTTGGTNATATATTAGCCAATAAGGGGTATTGAAACCGTGGNCGGGNANCGAGATTATATACCGACTCAGTGTAACACACAACGAAACCAACAATTAACACTTCCCATACCACGTCCTTTCATCATCATTCTGAAGTCATTCTTTGGCNCACAAGTATCTCTTGGGAGATTGAGAGATTGAGTACCGCACGGAAGGACCAGATCGCCATGTAATCGTTCGCCCCTGCTTCAGTCCGTGTCTCTGAGTGCCCGGGGGTATGTGTGTAGTAATTAAACCTTAGAACAGTAAAATCATTTGGCCTAAATTGATTGCGTGTAAAACAACTGTCANCCTCGGGCAATTCTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6622#0 TAAATCAACCCACACAGACACATATAGCTGGGTTGTACGATCAAATTCTCCTTTCTCATC 60
consensus_6622#1 ------------------------------------------------GGTTTACTNATG 12
** ** **
consensus_6622#0 ACTCCCTACTAGGTCTAGTTTCCGTTTTTATTACGTTTTAATGAAGAAGATTAATGCGTG 120
consensus_6622#1 TGTNTGAAGTAGTTGCGGGNTAGTAGTGTGATAAAGGTAAATGTATTGTAATAATGTTGG 72
* * *** * * * * * ** * **** * * ***** *
consensus_6622#0 TCGCTACTCTCCTGCAGCACCACACCGGAGAGACACAACGCTCCTTTTGGCACAGTTTAT 180
consensus_6622#1 T--CCGCTTTTGGGT-GCCTAGGACCATTGGAACNCATT--TGCTTTT--------CCNT 119
* * ** * * ** *** * ** ** * ***** *
consensus_6622#0 TTCGTCGATGACTATTTTCAAATTATCCCTCCCCAG--GCCCAACCAGCAGATTAAAAAC 238
consensus_6622#1 CTTGTGGCCAAACGGTCCTANACCCNTCCTAACCAAATNCCCAGCCGGCGG--TAATGGT 177
* ** * * * * * *** *** **** ** ** * ***
consensus_6622#0 AAAAACAAACAAACAAACAAAAAGCTAAAATCGTTTCGCAATCTTTATGATTGCAAAACA 298
consensus_6622#1 AAGGGTAACCCTA-GCGTATTGAAGCGGGTCCGATTAGCCACCATGATGTTGTTGGGGNG 236
** ** * * * * ** ** ** * * * *** *
consensus_6622#0 CAGAAAGCACGTTAACAACATACAC-AACTGAAAAAGCAAAGGATGAAAC--AAAACAAA 355
consensus_6622#1 GCCATAATCCCTTAGTGGTTTTGGTTAATTGTTGTGACGAGTTCNGGAATTGGGANCTTT 296
* * * *** * ** ** * * * ** * *
consensus_6622#0 AAACGACTCAAAACACACAACGAAATAC-ACATTAACACTGCCCAACCCGTCCTCTCATC 414
consensus_6622#1 AATTTTTTTTCCATATAGAGTGTTATTCCGCGCTTTCCGCGGCCAA--GGTGCCCTCCGC 354
** * * * * * * ** * * * * * **** ** * *** *
consensus_6622#0 TTCATTCTGAAGTCATTCTTTGGCCACAGTATCTCTTGGGAGATTGAGTACCGCACGGGA 474
consensus_6622#1 TAAGCGCANNAGCCAAT--------AGGGTATTT-TTAGAAGGT----ANCCGATATGTN 401
* * ** ** * * **** * ** * ** * *** *
consensus_6622#0 GGACAATTGCCCGCGCTGCTTCAGTCCTGGTCTCTGAGTGCCCGGGGGTATGAGTGTAGT 534
consensus_6622#1 TGATGAGTG---ACGTTGTGNC--CTGTGTTNACTATGTCACAGTGTAGATAGGNCTGTT 456
** * ** ** ** * ** * ** ** * * * ** * * *
consensus_6622#0 AATTAAATCTTAAACAGTAAAATCATTTGGCCTAAATTGATTGCGAGTAAAACAAACTGT 594
consensus_6622#1 GATAGTATANTTCCCAGTGN-----TTCGGCCAAATTTTTTAATGGG--------ATTTT 503
** ** * **** ** **** ** ** * * * * * *
consensus_6622#0 CCCGTTCTTCCTACAAGCTAAA-ACACAACCAAAAGGTATGATAGAGACCACCAGTCACC 653
consensus_6622#1 GCCAATATG--TACCACCTAGGTATATAGCCAACCGTTTAGACATAC-CAATTAGCTACC 560
** * * *** * *** * * * **** * * ** * * * * ** ***
consensus_6622#0 AGTCTCTTTTGCTATTCTGTGCCCAATGCATGACCGAAAATCGGTTTGCATAAAACAAAA 713
consensus_6622#1 NAGAACTTG-GTNATATATTAGCCAATAAGGGGTATTGAAACCGTGGNCGGGNANCGAGA 619
*** * ** * ***** * ** * ** * * * * *
consensus_6622#0 ACTCTCCCCCCACTAACGTATGATGAAGATGCAGCGAAATATACAAAATAGAAATCTATA 773
consensus_6622#1 -TTATATACCGACTCA-GTGT----AACACACAACGAAACCAACAAT-TAACACTTCCCA 672
* * ** *** * ** * ** * ** ***** **** ** * * *
consensus_6622#0 GTTACCACAGGGCTTTCGTCTACGTTACACTACTTCTGCCATGCTTGCTTAGGAAAATAT 833
consensus_6622#1 --TACCAC-GTCCTTTCATCATCATT------CTGAAGTCATTCTTTGGCNCACAAGTAT 723
****** * ***** ** * ** ** * *** *** ** ***
consensus_6622#0 AAACATAAAATAAAATATACACTTAAATTCACGGCGAGGAGATTCTACTTCCGTTTCACT 893
consensus_6622#1 ---CTCTTGGGAGATTGAGAGATTGAGTACCGCACGGAAGGACCAGATCGCCATGTAATC 780
* * * * ** * * * ** ** * ** * * *
consensus_6622#0 GATCCTGCAGTAGTATTATTCTGTGCTTTTGCTAGAGCATTCACAGTAAATCGACACGTA 953
consensus_6622#1 GTTC--GCCCCTGCTTCAGTCCGTGTCTCTG----AGTGCCCGGGGGTATGTGTGTAGTA 834
* ** ** * * * ** *** * ** ** * * * * ***
consensus_6622#0 CGTACAACGCTTACATTTTCAAACCCGTGAAATTCAAACTCCTCTCTCCTGAGACAAGCC 1013
consensus_6622#1 ATTA-AAC-CTTAGAACAGTAAAATCATTTGGCCTAAATTGATTGCGTGTAAAACAA--- 889
** *** **** * *** * * *** * * * * * ****
consensus_6622#0 CCTTTAAGCTTCCATCGAG-CGACGAATCGATTACTACGGGGCACTCGCACTGGGGTATG 1072
consensus_6622#1 -CTGTCANCCTCGGGCAATTCTGC------------------------------------ 912
** * * * ** * * * *
consensus_6622#0 ATTTGGTTTAGGTAGAGTATTTGATGGTTTTCGCAGATGCCGCTCACCGCTCGAAATCGA 1132
consensus_6622#1 ------------------------------------------------------------
consensus_6622#0 ATATGGACCCAATCCAGCCTAACAGTGAGATCCGATACCTTGAGTAATCGAGTTTTCCAA 1192
consensus_6622#1 ------------------------------------------------------------
consensus_6622#0 CACGATGTGAAATTCGTCCAGCGGTTCCAGT 1223
consensus_6622#1 -------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||