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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6645#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1776 fasta sequence
[CCGACCTGCCGGACGATATGTTCAGCAAGGCGAAGCAACTGCACGAACTGTACGCGGACGGTAACATGATCGACGGCATACCGGACGCGCTGCGTTCGTTGCTGCGCCTGTCGACGCTTTCGCTCACACGCAATCGACTGCACGAGATCGACCCGCAGAGCTGGAGCATGATGCAGCGCCTGAAGGAGCTGTACCTGTCCGAGAACTTCATCCAGGAGCTGACGCCGCAAAGCTTCGAGCGACTGGAATCGCTGAAGGAGCTTCATCTTGACCGAAACCATCTGCATAGTATCCCGCAAAATACGTTCGCGCGAAATGGTAATCTGGAGAAGTTGAACCTATCGAGCAATCATCTAGTGGGCCCGCTGGCGAACAGCTTCGCGGGGCTGTGGAAGCTCAAGGAGCTACAACTTTCGGATAATCCACTGGTCGACATGGAGGCGAACAGTTTCCGCGATCTACGCAAGGTGGAAAAGCTGTCGCTCGAGAACGTTAGCCTGGCGGACGTCAGTGGCAGCGCGTTTTACGGTATGTCATCGCTCGAGAAGCTCGACTTGGACGAGAACCGCGTGCACCGACTCGAAGGATCCTCTCTGCGGGGGCTTGAGATGCTCGAAACATTGTCCATCAACCACAACCCGGTCTCGCGCATCGATGCAAACACGTTCAAGCATTTGGGCAATCTGAAAACGATCTCGCTCGGTCCGGGCTCGATCGACTTCACCGAGGATCTGCTGTCCAACAATCAGCGGCTGAAGGAGCTGTATCTGTTCAACTGTGTGGCAAGTCCGCTACCGCCCCGATTCTTTCACTTTAACAAGAAGCTACAAACGCTGGCGATCGTCAACAACGCCAAGCTGGGCGGGTTGAACAAGCAGTGGTTTAAGGATCTTTCCAACCTGCAAACGCTGGTGCTTACGCGCAACGGGTTAACGCAGTTCGAGAAGGGTATTTTCGATGCGCTCGATGGGCTGGACGCACTATACTTGTCGGGCAATCCGGTCGGCGAGCTAGATCGGGACGTGTTTTCCCACGTCGTTGGGCTAGAGGTGCTGGATCTTTCCAGCATGAAGCTGCGCACGCTACCGATGGGCATATTCGACAATTTGTACGACCTGGAGCTGCTGGATTTGGGTGAAAACGAGCTTGCGAACGGGCTGACGAATGGTGTGTTTAGAAATCTGTACTCGCTCAAGACACTGTCCCTCGATAACAATCATCTAAAAACGCTCGACACGGTGCTGTTCGACGATCTGAAGAACCTGCGCACGATCGACCTGAGCGGCAACGAGCTGAGCAGTCTCGATCCGCAGCTCTTCCACGATTCACTCGATCTCGAGCTGCTTGATCTTTCCTCCAATAAGTTCACCACCTTCGACTTACAACAGACGACCTTCTTCAAAACGCTGATCGAGCTCGATCTGGACGACAATCAGCTCGTTTCGATCCGCATCACGGAAGATCTGGAGGAGCTGTACGTGGAGAACAATCAGCTGACGGCGATCGAGGTCGACAACTCACCGTCGTACAATCTCCGCAGCCTGTCGATCGCGAACAACAACTTTACCGAGCTGGATTCGCTGTACCGGTTCAACAATCTGGAGGAGCTGGACGCGTCCGAGAACGACGAGCTGCGCGTGCTAGAGCTGGGCCGGATATCGAAAGCCATGTCGGTGCTGGAAGTGCTGAACGTGTCGCACTGCAACATTGAGCAGCTGAATTTGGCGGAGATAGAGATGCACGCGTTCCTGGAGCGGTTGGATGTGTCGGGCAATC]
[+] EMBL BM632047 [CCGACCTGCCGGACGATATGTTCAGCAAGGCGAAGCAACTGCACGAACTGTACGCGGACGGTAACATGATCGACGGCATACCGGACGCGCTGCGTTCGTTGCTGCGCCTGTCGACGCTTTCGCTCACACGCAATCGACTGCACGAGATCGACCCGCAGAGCTGGAGCATGATGCAGCGCCTGAAGGAGCTGTACCTGTCCGAGAACTTCATCCAGGAGCTGACGCCGCAAAGCTTCGAGCGACTGGAATCGCTGAAGGAGCTTCATCTTGACCGAAACCATCTGCATAGTATCCCGCAAAATACGTTCGCGCGAAATGGTAATCTGGAGAAGTTGAACCTATCGAGCAATCATCTAGTGGGCCCGCTGGCGAACAGCTTCGCGGGGCTGTGGAAGCTCAAGGAGCTACAACTTTCGGATAATCCACTGGTCGACATGGAGGCGAACAGTTTCCGCGATCTACGCAAGGTGGAAAAGCTGTCGCTCGAGAACGTTAGCCTGGCGGACGTCAGTGGCAGCGCGTTTTACGGTATGTCATCGCTCGAGAAGCTCGACTTGGACGAGAACCGCGTGCACCGACTCGAAGGATCCTCTCTGCGGGGGCTTGAGATGCTCGAAACATTGTCCATCAACCACAACCCGGTCTCGCGCATCGATGCAAACACGTTCAAGCATTTGGGCAATCTGAAAACGATCTCGCTCGGTC ]
[+] EMBL BM580950 [ ccgCATCGCTCGAGAAGCTCGACTTGGACGAGAACCGCGTGCACCGACTCGAAGGATCCTCTCTGCGGGGGCTTGAGATGCTCGAAACATTGTCCATCAACCACAACCCGGTCTCGCGCATCGATGCAAACACGTTCAAGCATTTGGGCAATCTGAAAACGATCTCGCTCGGTCCGGGCTCGATCGACTTCACCGAGGATCTGCTGTCCAACAATCAGCGGCTGAAGGAGCTGTATCTGTTCAACTGTGTGGCAAGTCCGCTACCGCCCCGATTCTTTCACTTTAACAAGAAGCTACAAACGCTGGCGATCGTCAACAACGCCAAGCTGGGCGGGTTGAACAAGCAGTGGTTTAAGGATCTTTCCAACCTGCAAACGCTGGTGCTTACGCGCAACGGGTTAACGCAGTTCGAGAAGGGTATTTTCGATGCGCTCGATGGGCTGGACGCACTATACTTGTCGGGCAATCCGGTCGGCGAGCTAGATCGGGACGTGTTTTCCCACGTCGTTGGGCTAGAGGTGCTGGATCTTTCCAGCATGAAGCTGCGCACGCTACCGATGGGCATATTCGACAATTTGTACGACCTGGAGCTGCTGGATTTGGGTGAAAACGAGCTTGCGAACGGGCTGACGAATGGTGTGTTTAGAAATCTGTACTC ]
[+] EMBL BM643448 [ CCGCCACGATTCTTCCACTTCAACAAGAAGCTGCAAACGCTGGCGATCGTCAACAACGCCAAGCTGGGCGGGTTGAACAAGCAGTGGTTTAAGGATCTTTCCAACCTGCAAACGCTGGTGCTTACGCGCAACGGGTTAACGCAGTTCGAGAAGGGCATATTCGATGCGCTCGATGGACTGGACGCACTATACTTGTCGGGTAATCCGGTCGGCGAGCTAGATCGGGACGTGTTTTCCCACGTCGTTGGGCTGGAGGTGCTGGATCTTTCCAGCATGAAGTTGCGCACGCTACCGATGGGCATATTCGACAATTTGTACGACCTGGAGCTGCTGGATTTGGGTGAAAACGAACTCGCGAACGGGCTGACGAATGGTGTGTTTAGAAATCTGTACTCGCTCAAGACACTGTCCCTCGATAACAATCATCTAAAAACGCTCGACACGGTGCTGTTCGACGATCTGAAGAACCTGCGCACGATCGACCTGAGCGGCAACGAGCTGAGCAGTCTCGATCCGCAGCTCTTCCACGATTCACTCGATCTCGAGCTGCTTGATCTTTCCTCCAATAAGTTCACCACCTTCGACTTACAACAGACGACCTTCTTCAAAACGCTGATCGAGCTCGA ]
[+] EMBL BM650057 [ ccgCGACAATTTGTACGACCTGGAGCTGCTGGATTTGGGTGAAAACGAGCTTGCGAACGGGCTGACGAATGGTGTGTTTAGAAATCTGTACTCGCTCAAGACACTGTCTCTCGATAACAATCATCTAAAAACGCTCGACACGGTGCTGTTCGACGATCTGAAGAACCTTCGCACGATCGACCTGAGCGGCAACGAGCTGAGCAGTCTCGATCCGCAGCTCTTCCACGATTCGCTCGATCTCGAACTGCTTGATCTTTCCTCCAACAAGTTCACCACCTTCGACTTACAGCAGACCACCTTCTTCAAAACGCTGATCGAGCTCGATCTGGACGACAATCAGCTCGTTTCGATCCGCATCACGGAAGATCTGGAGGAGCTGTACGTGGAGAACAATCAGCTGACGGCGATCGAGGTCGACAACTCACCGTCGTACAATCTCCGCAGCCTGTCGATCGCGAACAACAACTTTACCGAGCTGGATTCGCTGTACCGGTTCAACAATCTGGAGGAGCTGGACGCGTCCGAGAACGACGAGCTGCGCGTGCTAGAGCTGGGCCGGATATCGAAAGCCATGTCGGTGCTGGAAGTGCTGAACGTGTCGCACTGCAACATTGAGCAGCTGAATTTGGCGGAGATAGAGATGCACGCGTTCCTGGAGCGGTTGGATGTGTCGGGCAATC]
consensusID : consensus_6645#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 616 fasta sequence
[CCCACGCGTCCGGGAGGAGCTGTACGTGGAGAACAATCAGCTGACGGCGATCGAGGTCGACAACTCACCGTCGTACAATCTCCGCAGCCTGTCGATCGCGAACAACAACTTTACCGAGCTGGATTCGCTGTACCGGTTCAACAATCTGGAGGAGCTGGACGCGTCCGAGAACGACGAGCTGCGCGTGCTAGAGCTGGGCCGGATATCGAAAGCCATGTCGGTGCTGGAAGTGCTGAACGTGTCGCACTGCAACATTGAGCAGCTGAATTTGGCGGAGATAGAGATGCACGCGTTCCTGGAGCGGTTGGATGTGTCGGGCAATCGGTTGGCTAGTTTGGAGATGGATGCGTACCGGTACTTCCCGGCGGTGGAAAGCTTCCTGTTCGGTGGCAACGCGTTCCAGCAGTTCTCGATCGAGGAGGTGCTCGGTAGCTTTAAGGATTTGGAAATGATCGGCCTGGAGGGGACGGAATGGGAGCCCGCCTTTCTGGACGAGCTGGAGCGCTACATCGAGGATAGAGATGTACGGTTTTGGCAGCAGGGACAGGTGGAAACACCGACCTGTACGATCGGGCGCGTCAGTCGGCTGTTCTGTTGAGCGATGCGAGCGTGCTGA]
[+] EMBL BM642376 [CCCACGCGTCCGGGAGGAGCTGTACGTGGAGAACAATCAGCTGACGGCGATCGAGGTCGACAACTCACCGTCGTACAATCTCCGCAGCCTGTCGATCGCGAACAACAACTTTACCGAGCTGGATTCGCTGTACCGGTTCAACAATCTGGAGGAGCTGGACGCGTCCGAGAACGACGAGCTGCGCGTGCTAGAGCTGGGCCGGATATCGAAAGCCATGTCGGTGCTGGAAGTGCTGAACGTGTCGCACTGCAACATTGAGCAGCTGAATTTGGCGGAGATAGAGATGCACGCGTTCCTGGAGCGGTTGGATGTGTCGGGCAATCGGTTGGCTAGTTTGGAGATGGATGCGTACCGGTACTTCCCGGCGGTGGAAAGCTTCCTGTTCGGTGGCAACGCGTTCCAGCAGTTCTCGATCGAGGAGGTGCTCGGTAGCTTTAAGGATTTGGAAATGATCGGCCTGGAGGGGACGGAATGGGAGCCCGCCTTTCTGGACGAGCTGGAGCGCTACATCGAGGATAGAGATGTACGGTTTTGGCAGCAGGGACAGGTGGAAACACCGACCTGTACGATCGGGCGCGTCAGTCGGCTGTTCTGTTGAGCGATGCGAGCGTGCTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6645#0 CCGACCTGCCGGACGATATGTTCAGCAAGGCGAAGCAACTGCACGAACTGTACGCGGACG 60
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 GTAACATGATCGACGGCATACCGGACGCGCTGCGTTCGTTGCTGCGCCTGTCGACGCTTT 120
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 CGCTCACACGCAATCGACTGCACGAGATCGACCCGCAGAGCTGGAGCATGATGCAGCGCC 180
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 TGAAGGAGCTGTACCTGTCCGAGAACTTCATCCAGGAGCTGACGCCGCAAAGCTTCGAGC 240
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 GACTGGAATCGCTGAAGGAGCTTCATCTTGACCGAAACCATCTGCATAGTATCCCGCAAA 300
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 ATACGTTCGCGCGAAATGGTAATCTGGAGAAGTTGAACCTATCGAGCAATCATCTAGTGG 360
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 GCCCGCTGGCGAACAGCTTCGCGGGGCTGTGGAAGCTCAAGGAGCTACAACTTTCGGATA 420
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 ATCCACTGGTCGACATGGAGGCGAACAGTTTCCGCGATCTACGCAAGGTGGAAAAGCTGT 480
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 CGCTCGAGAACGTTAGCCTGGCGGACGTCAGTGGCAGCGCGTTTTACGGTATGTCATCGC 540
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 TCGAGAAGCTCGACTTGGACGAGAACCGCGTGCACCGACTCGAAGGATCCTCTCTGCGGG 600
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 GGCTTGAGATGCTCGAAACATTGTCCATCAACCACAACCCGGTCTCGCGCATCGATGCAA 660
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 ACACGTTCAAGCATTTGGGCAATCTGAAAACGATCTCGCTCGGTCCGGGCTCGATCGACT 720
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 TCACCGAGGATCTGCTGTCCAACAATCAGCGGCTGAAGGAGCTGTATCTGTTCAACTGTG 780
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 TGGCAAGTCCGCTACCGCCCCGATTCTTTCACTTTAACAAGAAGCTACAAACGCTGGCGA 840
consensus_6645#1 -------------------------CCCACGCGTCCGGGAGGAGCTGT--ACGTGGAGAA 33
* * * * ** **** *** * *
consensus_6645#0 TCGTCAACAACGCCAAGCTGGGCGGGTTGAACAAGCAGTGGTTTAAGGATCTTTCCAACC 900
consensus_6645#1 CAATCAGC----TGACGGCGATCGAGGTCGACAACTCACCGTCGTACAATCTCCGCAGCC 89
*** * * * * ** * * **** ** * **** ** **
consensus_6645#0 TGCAAACGCTGGTGCTTACGCGCAACGGGTTAACGCAGTTCGAGAAGGGTATTTTCGATG 960
consensus_6645#1 TGTCGA---------TCGCGAACAACAACTTTAC------CGAGCTGGATTCGCTGTACC 134
** * * ** **** ** ** **** ** * * *
consensus_6645#0 CGCTCGATGGGCTGGACGCACTATACTTGTC---GGGCAATCCGGTCGGCGAGCTAGATC 1017
consensus_6645#1 GGTTCAACAATCTGGAGGAGCTGGACGCGTCCGAGAACGACGAGCTGCGCGTGCTAGAGC 194
* ** * ***** * ** ** *** * * * * * *** ****** *
consensus_6645#0 GGGACGTGTTTTCCCACGTC--GTTGG-GCTAGAGGTGCTGGATCTTTC-CAGCATGAAG 1073
consensus_6645#1 TGGGCCGGATATCGAAAGCCATGTCGGTGCTGGAAGTGCTGAACGTGTCGCACTGCAACA 254
** * * * ** * * * ** ** *** ** ****** * * ** ** *
consensus_6645#0 CTGCGCACGCTACCGATGGGCATATTCGACAATTTGTACGA-CCTGGAGCTGCTGGATTT 1132
consensus_6645#1 TTGAGCA-GCTGA-ATTTGGCGGAGATAGAGATGCACGCGTTCCTGGAGCGGTTGGATGT 312
** *** *** * *** * ** ** ******** * ***** *
consensus_6645#0 GGGTGAAAACGAGCTTGCGAACGGGCTGACGAATGGTGTGTTTAGAAATCTGTACTCGCT 1192
consensus_6645#1 GTCGGGCAATCGGTTGGCTAGT---TTGGAGATGGATGCGTACCGGTACTTCCCGGCGGT 369
* * ** * * ** * ** ** * ** ** * * * ** *
consensus_6645#0 CAAGACACTGTCCCTCGATAACAATCA--TCTAAAAACGCTCGA-CACGGTGCTGTTCGA 1249
consensus_6645#1 GGAAAGCTTCCTGTTCGGTGGCAACGCGTTCCAGCAGTTCTCGATCGAGGAGGTGCTCGG 429
* * * *** * *** ** * * ***** * ** * ** ***
consensus_6645#0 CGATCTGAAGAACCTGCGCACGATCGACCTGAGCGGCAACGAGCTGAGCAGTCTCGATCC 1309
consensus_6645#1 TAGCTTTAAGGATTTGGAAATGATCGGCCTG-GAGGGGACGGAATGGG-------AGCCC 481
* *** * ** * ***** **** * ** *** ** * **
consensus_6645#0 GCAGCTCTTCCACGATTCACTCGATCTCGAGCTGCTTGATCTTTCCTCCAATAAGTTCAC 1369
consensus_6645#1 GC----CTTTCTGGA------CGAGCTGGAGC-GCTACATCG----------AGGATAGA 520
** *** * ** *** ** **** *** *** * * *
consensus_6645#0 CACCTTCGACTTACAACAGACGACCTTCTTCAAAACGCTGATCGAGCTCGATCTGG-ACG 1428
consensus_6645#1 GATGTACGGTTT-TGGCAGCAGGGACAGGTGGAAACACCGACCT-GTACGATCGGGCGCG 578
* * ** ** *** * * **** * ** * * ***** ** **
consensus_6645#0 ACAATCAGCTCGTTTCGATCCGCATCACGGAAGATCTGGAGGAGCTGTACGTGGAGAACA 1488
consensus_6645#1 TCAGTCGGCT-GTTCTGTTGAGCGATGCGAGCGTGCTGA--------------------- 616
** ** *** *** * * ** ** * ***
consensus_6645#0 ATCAGCTGACGGCGATCGAGGTCGACAACTCACCGTCGTACAATCTCCGCAGCCTGTCGA 1548
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 TCGCGAACAACAACTTTACCGAGCTGGATTCGCTGTACCGGTTCAACAATCTGGAGGAGC 1608
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 TGGACGCGTCCGAGAACGACGAGCTGCGCGTGCTAGAGCTGGGCCGGATATCGAAAGCCA 1668
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 TGTCGGTGCTGGAAGTGCTGAACGTGTCGCACTGCAACATTGAGCAGCTGAATTTGGCGG 1728
consensus_6645#1 ------------------------------------------------------------
consensus_6645#0 AGATAGAGATGCACGCGTTCCTGGAGCGGTTGGATGTGTCGGGCAATC 1776
consensus_6645#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||