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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6657#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1032 fasta sequence
[GCGAACGGCAAAACAATGCGCTGTTGCGATCGTGTTCCGGTGATGGTGGTGAGCAGTTTGGCGCTGTGTGGTGTGCTGCTGCTCGCATTGTCTCACACACCATTGGTTACGGCAGGCGGATTGCCCTGCGCCTTGCGGCAGTATCCGAACGGAGCGGTGTGCGTGTGCAATGCGACGTACTGCGATACGCTCGAGTACCGCGAGCCGACGGAGCTGGGCAGCTTTCTGCTAGTGTCCAGCAGCAGTGGCGGGTTGCGCTTCGCCCAAACCGAGGGCAACTTTTCGCGCACTGCCAAACAGCAGCGGCCGATCCGTGCGGAAGCGGACATCACGATCACGCTCGACCAGACCGCCGCCCGCTATCCGGACAAGTGGATCTTCAACACGGAAGCCTCGCTGGGCGACAAGCCACTGCAGCAGCATCGGCCCATCCTGGGGTCGTGGGAGCGGGCTGAATCGTATATCGTGTACGTGATGCAGGACCTGCAGCACAGTGTGCACGGGTGGATCGATTGGAATCTGGTGCTCGATGAGCGGGGCGGTCCGAACTATGCGGACAACTTTGTCGAGAGTGCGGTGATTGTGAACGGAACGTCCTGGGAGGAAGCGTACAAGCAGCCTATTTTCTACGGGCTGGGACACTTTTCACGCTTCATACTGCCCGGCTCGGTGCGGCTGGAGGTGCAGTCGTCCAGCGGCGATGTGCAGGTCATTGCATTTGAGCGGCCCGACAAGCGCACGGTGCTCGTAATGTACAACCGAGCCAACTGGAAATCGAGCGTCCGCATAGAGGATAAGCGGTACGGCAGTGTGCGGGTACGTCTTCCACCCAAATCGGTGCATACGATGCTCTACCTATAAGACTGACTTCTAGT------ACGAAAGGGTACCAGTGCTACACCAAACCATCGTAACCTCGCAGAATCAATAGACGGGAGGAACAAAAAACAAACCAAAAGCGAATACACACAAACACACAAAAAACCCCCGAAGAATAAATGGAAGCTCGTTAGGAAGCTGAAGGTGCAAAGAAAA]
[+] EMBL CNS09KML [GCGAACGGCAAAACAATGCGCTGTTGCGATCGTGTTCCGGTGATGGTGGTGAGCAGTTTGGCGCTGTGTGGTGTGCTGCTGCTCGCATTGTCTCACACACCATTGGTTACGGCAGGCGGATTGCCCTGCGCCTTGCGGCAGTATCCGAACGGAGCGGTGTGCGTGTGCAATGCGACGTACTGCGATACGCTCGAGTACCGCGAGCCGACGGAGCTGGGCAGCTTTCTGCTAGTGTCCAGCAGCAGTGGCGGGTTGCGCTTCGCCCAAACCGAGGGCAACTTTTCGCGCACTGCCAAACAGCAGCGGCCGATCCGTGCGGAAGCGGACATCACGATCACGCTCGACCAGACCGCCGCCCGCTATCCGGACAAGTGGATCTTCAACACGGAAGCCTCGCTGGGCGACAAGCCACTGCAGCAGCATCGGCCCATCCTGGGGTCGTGGGAGCGGGCTGAATCGTATATCGTGTACGTGATGCAGGACCTGCAGCACAGTGTGCACGGGTGGATCGATTGGAATCTGGTGCTCGATGAGCGGGGCGGTCCGAACTATGCGGACAACTTTGTCGAGAGTGCGGTGATTGTGAACGGAACGTCCTGGGAGGAAGCGTACAAGCAGCCTATTTTCTACGGGCTGGGACACTTTTCACGCTTCATACTGCCCGGCTCGGTGCGGCTGGAGGTGCAGTCGTCCAGCGGCGATGTGCAGGTCATTGCATTTGAGCGGCCCGACAAGCGCACGGTGCTCGTAATGTACAACCGAGCCAACTGGAAATCGAGCGTCCGCATAGAGGATAAGCGGTACGGCAGTGTGCGGGTACGTCTTCCACCCAAATCGGTGCATACGATGCTCTACCTATAAGACTGACTGCTAGT ACGAAAGGGTACCAGTGCTACACCAAACCATC ]
[-] EMBL CNS09KMM [ GGAAGCGGACATAACGATAACGCTCGACCAGACCGCCGCCCGCTATCCGGACAAGTGGATCTTCAACACGGAAGCCTCGCTGGGCGACAAGCCACTGCAGCAGCATCGGCCCATCCTGGGGTCGTGGGAGCGGGCTGAATCGTATATCGTGTACATGATGCAGGACCTGCAGCACAGTGTGCACGGGTGGATCGATTGGAATCTGGTGCTCGATGAGCGGGGCGGTCCGAACTATGCGGACAACTTTGTCGAGAGTGCGGTGATTGTGAACGGAACGTCCTGGGAGGAAGCGTACAAGCAGCCTATTTTCTACGGGCTGGGACACTTTTCACGCTTCATACTGCCCGGCTCGGTGCGGCTGGAGGTGCAGTCGTCCAGCGGCGATGTGCAGGTCATTGCATTTGAGCGGCCCGACAAGCGCACGGTGCTCGTAATGTACAACCGAGCCCACTGGAAATCGAGCGTCCGCATAGAGGATAAGCGGTACGGCAGTGTGCGGGTACGTCTTCCACCCAAATCGGTGCATACGATGCTCTACCTATAAGACTGACTTCTAGT ACGAAAGGGTACCAGTGCTACACCAAACCATCGTAACCTCGCAGAATCAATAGACGGGAGGAACAAAAAACAAACCAAAAGCGAATACACACAAACACACAAAAAACCCCCGAAGAATAAATGGAAGCTCGTTAGG ]
[-] EMBL AGA281055 [ GCAGCCTATTTTCTACGGGCTGGGACACTTTTCACGCTTCATACTGCCCGGCTCGGTGCGGCTGGAGGTGCAGTCGTCCAGCGGCGATGTGCAGGTCATTGCATTTGAGCGGCCCGACAAGCGCACGGTGCTCGTAATGTACAACCGAGCCAACTGGAAATCGAGCGTCCGCATAGAGGATAAGCGGTACGGCAGTGTGCGGGTACGTCTTCCACCCAAATCGGTACATACGATGCTCTACCTATAAGACTGACTTCTAGTATGAACACCAAACCAAACCAGTGCTACACCAAACCATCGTAACCTCGCAGAATCAATAGACGGGAGGAACAAAAAACAAACCAAAAGCGAATACACAC ACACACACAAAACCCCCGAAGAATAAATGGAAGCTCGTTAGGAAGCTGAAGGTGCAAAGAAAA]
consensusID : consensus_6657#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 878 fasta sequence
[CCGCTGGGCCGGCTGAACCCGGCGCTGCGCGAAAGCCTGTACAAAGCGTACTACTCGCCGACGCAGGGGATTGCGTACCGGTTTATGCGCGTACCGATCGGTGGCTGTGATTTTGACCTGGCACCGTGGGCGTACAACGAGCTGCCGGTGAACGATGCAGCCCTGTCCAACTTCACCCGGCTGGATGAGCGCGATCTGGTGAAGGTGGCCCAGATCAAGGAGCTGATGAACGTGACGGGTAACGGCGAGATACGGCTGATCGGTGCCGCCTGGAGTCCGCCGCCGTGGATGAAAACGAACAACGATTGGACGGGCGCCAGCCGGCTACGACCCGAGTACTACCAGACGTGGGCCGACTATCACGTGCGCTATCTGGAGCTGATGCGTGCCGCCGGGCTAAACTTTTGGGCCATCTCGACCGGCAACGAACCGCTGAACGGTGTGATCGGCTTCCTGTTTGTGCACTTCATGAGCCTGGGCTGGATTGCGCAGGACCAGGGCCGCTGGGTGGGAGAGAACCTCGGCCCGGCGCTCCGCGCTTCCGCCGTCAGCGAGGTGAAGCTGTTCGGGTGCGACGATCAGCGGTACACGTTCCCGCTGTGGTTCAAGCTGATGGACGAGGGCCACCCGAACGCGACGCGCTACCTGGACGGGCTGGCCGTCCACTGGTACTGGGACGGTGTGGCGCCGGCCGCCCTGCTCGACCAGACTGCCGCCCGCTATCCGGACAAGTGGATCTTCAACACGGAAGCCTCGCTGGGCGACAAGCCACTGCAGCAGCATCGGCCCATCCTGGGGTCGTGGGAGCGGGCCGAATCGTACATCGTGTACGTGATGCAGGATCTGCAGCACAGTGTGCACGGATGGATCGATTGGAA]
[+] EMBL BM603965 [CCGCTGGGCCGGCTGAACCCGGCGCTGCGCGAAAGCCTGTACAAAGCGTACTACTCGCCGACGCAGGGGATTGCGTACCGGTTTATGCGCGTACCGATCGGTGGCTGTGATTTTGACCTGGCACCGTGGGCGTACAACGAGCTGCCGGTGAACGATGCAGCCCTGTCCAACTTCACCCGGCTGGATGAGCGCGATCTGGTGAAGGTGGCCCAGATCAAGGAGCTGATGAACGTGACGGGTAACGGCGAGATACGGCTGATCGGTGCCGCCTGGAGTCCGCCGCCGTGGATGAAAACGAACAACGATTGGACGGGCGCCAGCCGGCTACGACCCGAGTACTACCAGACGTGGGCCGACTATCACGTGCGCTATCTGGAGCTGATGCGTGCCGCCGGGCTAAACTTTTGGGCCATCTCGACCGGCAACGAACCGCTGAACGGTGTGATCGGCTTCCTGTTTGTGCACTTCATGAGCCTGGGCTGGATTGCGCAGGACCAGGGCCGCTGGGTGGGAGAGAACCTCGGCCCG ]
[+] EMBL AGA282683 [ GGTGTGATCGGCTTCCTGTTTGTGCACTTCATGAGCCTGGGCTGGATTGCGCAGGACCAGGGCCGCTGGGTGGGAAAGAACCTCGGCCCGGCGCTCCGCGCTTCCGCCGTCAGCGAGGTGAAGCTGTTCGGGTGCGACGATCAGCGGTACACGTTCCCGCTGTGGTTCAAGCTGATGGACGAGGGCCACCCGAACGCGACGCGCTACCTGGACGGGCTGGCCGTCCACTGGTACTGGGACGGTGTGGCGCCGGCCGCCCTGCTCGACCAGACTGCCGCCCGCTATCCGGACAAGTGGATCTTCAACACGGAAGCCTCGCTGGGCGACAAGCCACTGCAGCAGCATCGGCCCATCCTGGGGTCGTGGGAGCGGGCCGAATCGTACATCGTGTACGTGATGCAGGATCTGCAGCACAGTGTGCACGGATGGATCGATTGGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6657#0 GCGAACGGCAAAACAATGCGCTGTTGCGATCGTGTTCCGGTGATGGTGGTGAGCAGTTTG 60
consensus_6657#1 ------------------------------------------------------------
consensus_6657#0 GCGCTGTGTGGTGTGCTGCTGCTCGCATTGTCTCACACACCATTGGTTACGGCAGGCGGA 120
consensus_6657#1 ---CCGCTGGGCCGGCTGAACCCGGCGCTG-------CGCGAAAGCCTGTACAAAGCGTA 50
* * ** **** * ** ** * * * * * * *** *
consensus_6657#0 TTGCCCTGCGCCTTGCGGCAGTATCCGAACGGAGCGGTGTGCGTGTGCAATGCGACGTAC 180
consensus_6657#1 CTACTCGCCGAC--GCAGGGGATTGCGTACCGGTT--TATGCGCGTACCGATCGGTG-GC 105
* * * ** * ** * * * ** ** * * **** ** * ** * *
consensus_6657#0 TGCGATAC-GCTCGAGTACCGCGAGCCGACGGAGCTGGGCAGCTTTCTGCTAGTGTCCAG 239
consensus_6657#1 TGTGATTTTGACCTGGCACCGTGGGCGTACAACG------AGCTGCCGGTGAACGAT--G 157
** *** * * * **** * ** ** * **** * * * * *
consensus_6657#0 CAGCAGTGGCGGGTTGCGCTTCGCCCAAACCGAGGGCAACTTTTCGCGCACTGCCAAACA 299
consensus_6657#1 CAGCCCTGTCCAACTTCACCCGGCTGGA--TGAGCGCGATCTGGTGAAGGTGGCCCAGAT 215
**** ** * * * * ** * *** ** * * * *** *
consensus_6657#0 GCAGCGGCCGATCCGTGCGGAAGCGGACATCACGATCACGCTCGACCAGACCGCCGCCCG 359
consensus_6657#1 CAAGGAGCTGATGAACGTGACGGGTAACGGCGAGAT-ACGGCTGATCGG--TGCCGCCTG 272
** ** *** * * * ** * *** *** ** * * ****** *
consensus_6657#0 CTATCCGGACAAGTGGATCTTCAACACGGAAGCCTCGCTGGGCGACAAGCCACTGCAGCA 419
consensus_6657#1 GAGTCCGCCGCCGTGGATGAAAACGAACAACGATTGGACGGGCGCCAGCCGGCTACGAC- 331
**** ****** * * * * * * ***** ** * ** * *
consensus_6657#0 GCATCGGCCCATCCTGGGGTCGTGGGAGCGGGCTGAATCGTATATCGTGTACGTGATGCA 479
consensus_6657#1 ---CCGAGTACTACCAGA--CGTGGG-----------CCGACTATCACGTGCGCTAT-CT 374
** * * * ****** ** **** ** ** ** *
consensus_6657#0 GGACCTGCAGCACAGTGTGCACGGGTGGATCGATTGGAATCTGGTGCTCGATGAGCGGGG 539
consensus_6657#1 GGAGCTGATGCGTGCCGC---CGGGCTAAACTTTTGGGCCATCTCGACCGGC-AACGAAC 430
*** *** ** * **** * * **** * * ** * **
consensus_6657#0 CGGTCCGAACTATGCGGACAACTTTGT---CGAGAGTGCGGTGATTGTGAACGGAACGTC 596
consensus_6657#1 CG--CTGAACGGTGTGATCGGCTTCCTGTTTGTGCACTTCATGAGCCTGGGCTGGATTGC 488
** * **** ** * * *** * * * *** ** * * * *
consensus_6657#0 CTGGGAGGAAGCGTACAAGCAGCCTATTTTCTACGGGCTGGGACACTTTTCACGCTTCAT 656
consensus_6657#1 GCAGGACCAGGGCCGCTGGGTGGGAGAGAACCTCGGCCCGGCGC----TCCGCGCTTC-C 543
*** * * * * * * *** * ** * * * ******
consensus_6657#0 ACTGCCCGGCTCGGTGCGGCTGG--AGGTGCAGTCGTCCAGCGGCG-ATGTGCAGGTCAT 713
consensus_6657#1 GCCGTC-AGCGAGGTGAAGCTGTTCGGGTGCGA-CGATCAGCGGTACACGTTCCCGCTGT 601
* * * ** **** **** ***** ** ****** * ** * * *
consensus_6657#0 TGCATTTGAGCGGCCCGACAAGCGCACGGTGCTCGTAATGTACAACCGAGCCAACTGGAA 773
consensus_6657#1 GG--TTCAAGCTGATGGACGAGGGCCACCCGAACGCGACGCGCTACCTGGACGG------ 653
* ** *** * *** ** ** * ** * * * *** * *
consensus_6657#0 ATCGAGCGTCCGCATAGAGGATAAGCGGTACGGCAGTGTGCGGGTACGTCTTCCACCCAA 833
consensus_6657#1 GCTGGCCGTCCAC-TGGTACTGGGACGGTGTGGCGC----CGGCCGCCCTGCTCGACCAG 708
* ***** * * * **** *** *** * * ***
consensus_6657#0 ATCGGTGCATACGATGCTCTACCTATAAGACTGACTTCTAGTACGAAAGGGTACCAGTGC 893
consensus_6657#1 ACTGCCGCCCGCTAT------CCGGACAAGTGGATCTTCAACACGGAAGCCTCGCTGGGC 762
* * ** * ** ** * ** * * *** *** * * * **
consensus_6657#0 TACACCAAACCATCGTAACCTCGCAGAATCAATAGACGGGAGGAACAAAAAACAAACCAA 953
consensus_6657#1 GACAAGCCACTGCAGCAGCATCGGCCCATCCTGGGGTCGTGGGAGCGGGCCG-AATCGTA 821
*** ** * * * *** *** * * *** * ** * *
consensus_6657#0 AAGCGAATACACACAAACACACAAAAAACCCCCGAAGAATAAATGGAAGCTCGTTAGGAA 1013
consensus_6657#1 CATCGTGTACGTGATGCAGGATCTGCAGCACAGTGTGCACGGATGGA---TCGATTGGAA 878
* ** *** * * * * * * ***** *** * ****
consensus_6657#0 GCTGAAGGTGCAAAGAAAA 1032
consensus_6657#1 -------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||