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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6688#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1220 fasta sequence
[CCGGATTCAGTTCCACAACATGTCACTTTGCTACGAGCAGGACGCACCGCCGGTGCTGAAGAACCTCGAGCTTGTGATCGAACCCACGTGGAAGGTGGGAATCGTCGGTCGAACCGGGGCCGGCAAATCGTCCCTCATCGGGGCCCTCTTCCGGTTGGCACGCATTGAAGGGCGCATCATGATTGATGGCATCGATACGGGTGTGATTTCGCTGGAAGCGTTACGCTCGAAGATATCGATCATCCCGCAGGATCCGGTACTGTTCAGCGCCACCATACGCTACAATCTCGATCCGTTCAGCCTGTACGACGACGACATGCTGTGGCGTGCGATCGGCGAAGTCGAGCTACGGTCCGCCATCAGTGGGTTGGACTTTATGGTGACAGAAGGTGGTACCAACTTCAGTGTCGGCCAGCGGCAACTAATCTGTCTCGCGCGAGCAATTCTGCGCAATAACAAAATACTGGTGCTTGACGAGGCGACTGCCAACGTAGATCCTCAGACGGATGCACTGATACAGAAAACGATCCGGGAGAAGTTCAAGCACTGTACGGTGCTAACGGTTGCGCATCGCCTGCACACGGTAATGGATTCCGACCGCATACTGGTGATGGATGCCGGTG-AAGCGAGGGAGTTTGACACTCCGCACATACTGCTCCAGCAGGAGGGTGGCATCCTGAAGGATATGGTCGAAGCAACGGGACCGTCCGAGTCGGAATCTCTCAAGCGCATTGCCGCGGAAACGTACGCGCAGATGGACCCGAATCGGCACCTCATGAACGGTATGCCGAACCCGTGGCGGTTTGGCAAGGAAGCGCCACAGTGAGCGTAACCCCGACAGCAAGCGATAAGTGTGTGAAGTCGGACAAACAGTGACGATGAAAGGAAGCAACTGGTACTGCCTCTTAGCTTAGTTAGAAGAGTTAGAATCGGAACAGAACATCACGCGCCTAGAGCCATTCAACAGTGAGCGCATATTGAAATGCGTTTTTTTAAAATATGGAATGCTTTTGCATTGTGTTTGAGTTTAACTGATGTAGTTGATAGCGTTTATTGCTCTTACTATCTTACTATTTACCAGTGTATGCGGTACTTTAACAATGGAACGACGAACGACCTACAAAACTAAATGTACTTTAACTGTTAAGCGTTACGAAGGGCGTTGTTGAAAATGGCCAAATGTTTACAACGAAATAAAACACAATTATTTTTAAAAAAAA]
[+] EMBL BM643077 [CCGGATTCAGTTCCACAACATGTCACTTTGCTACGAGCAGGACGCACCGCCGGTGCTGAAGAACCTCGAGCTTGTGATCGAACCCACGTGGAAGGTGGGAATCGTCGGTCGAACCGGGGCCGGCAAATCGTCCCTCATCGGGGCCCTCTTCCGGTTGGCACGCATTGAAGGGCGCATCATGATTGATGGCATCGATACGGGTGTGATTTCGCTGGAAGCGTTACGCTCGAAGATATCGATCATCCCGCAGGATCCGGTACTGTTCAGCGCCACCATACGCTACAATCTCGATCCGTTCAGCCTGTACGACGACGACATGCTGTGGCGTGCGATCGGCGAAGTCGAGCTACGGTCCGCCATCAGTGGGTTGGACTTTATGGTGACAGAAGGTGGTACCAACTTCAGTGTCGGCCAGCGGCAACTAATCTGTCTCGCGCGAGCAATTCTGCGCAATAACAAAATACTGGTGCTTGACGAGGCGACTGCCAACGTAGATCCTCAGACGGATGCACTGATACAGAAAACGATCCGGGAGAAGTTCAAGCACTGTACGGTGCTAACGGTTGCGCATCGCCTGCACACGGTAATGGATTCCGACCGCATACTGGTGATGGATGCCGGTGAAAGCGAGGGAGTTTGACACTCCGCACATA ]
[+] EMBL BX628783 [ GTACTGTTCAGCGCCACCATACGCTACAATCTCGATCCGTTCAGCCTGTACGACGACGACATGCTGTGGCGTGCGATCGGCGAAGTCGAGCTACGGTCCGCCATCAGTGGGTTGGACTTTATGGTGACAGAAGGTGGTACCAACTTCAGTGTCGGCCAGCGGCAACTAATCTGTCTCGCGCGAGCAATTCTGCGCAATAACAAAATACTGGTGCTTGACGAGGCGACTGCCAACGTAGATCCTCAGACGGATGCACTGATACAGAAAACGATCCGGGAGAAGTTCAAGCACTGTACGGTGCTAACGGTTGCGCATCGCCTGCACACGGTAATGGATTCCGACCGCATACTGGTGATGGATGCCGGTG AAGCGAGGGAGTTTGACACTCCGCACATACTGCTCCAGCAGGAGGGTGGCATCCTGAAGGATATGGTCGAAGCAACGGGACCGTCCGAGTCGGAATCTCTCAAGCGCATTGCCGCGGAAACGTACGCGCAGATGGACCCGAATCGGCACCTCATGAACGGTATGCCGAACCCGTGGCGGTTTGGCAAGGAAGCGCCACAGTGAGCGTAACCCCGACAGCAAGCGATAAGT ]
[+] EMBL AL931537 [ GATCGCCGAGGTGTAGCTACGGT CGGCATCAGTGGGTTGGAC TTATGGTGACGGAAGGTGGCACCAACTTCAGTGTCGGCCAGCGGCAACTAATCTGTCTCGCGCGAGCAATTCTGCGCAATAACAAAATACTGGTGCTTGACGAGGCGACGGCCAACGTGGATCCTCAGACGGATGCACTGATACAGAAAACAATCCGGGAGAAGTTCAAACACTGTACGGTGCTGACAGTTGCGCATCGCCTGCACACGGTAATGGATTCCGATCGCATACTGGTGATGGATGCCGGTG AAGCGAGGGAGTTTGACACTCCGCACATACTGCTCCAGCAGGAGGGTGGCATCCTGAAGGATATGGTCGAAGCAACGGGACCGTCCGAGTCGGAATCTCTCAAGCGCATTGCCG ]
[-] EMBL AGA283979 [ GCAAGGAAGCGCCACAGTGAGCGTAACCCCGACAGCAAGCGATAAGTGTGTGAAGTCGGACAAACAGTGACGATGAAAGGAAGCAACTGGTACTGCCTCTTAGCTTAGTTAGAAGAGTTAGAATCGGAACAGAACATCACGCGCCTAGAGCCATTCAACAGTGAGCGCATATTGAAATGCGTTTTTTTAAAATATGGAATGCTTTTGCATTGTGTTTGAGTTTAACTGATGTAGTTGATAGCGTTTATTGCTCTTACTATCTTACTATTTACCAGTGTATGCGGTACTTTAACAATGGAACGACGAACGACCTACAAAACTAAATGTACTTTAACTGTTAAGCGTTACGAAGGGCGTTGTTGAAAATGGCCAAATGTTTACAACGAAATAAAACACAATTATTTTTAAAAAAAA]
consensusID : consensus_6688#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 459 fasta sequence
[GAATCCCCCGAGGTTTTATGCACTGTACGGTGCTGACGGTTGCGCATCTGCCTGCACACGGTAATGGATTCCTGACCGCATACTGGTGATGTGATGCCTGGTGAAGCGAGGGAGTTTGACACTCCGCACATACTGCTCCAGCAGGAGGGTGGCATCCTGAACTGATATTGTGTCCGAAGCAACTGTGGACCNGTCCNGAGTCGGAATCTCTCAAGCGCATTGCCGCGGAAACGTACGCGCAGATGGACCCGAATCTGGACCTCATGAACGGTATGCCGAACCCTGTGGCGGTTTTGGCAACGGAAAGCGCCACCAGTGAGCGTAACCCGACAGCAAGCCGATAAACGTGTGTNGAAAGTCCGGACAAAACAGTGACGATGCAAACGGAAGCAACTGGTACTGNCTCTTAGCTTAGTTAGCAAGAGTTAGCAATCGGAACAGAACATCACGCGCCTAGAG]
[+] EMBL AL694642 [GAATCCCCCGAGGTTTTATGCACTGTACGGTGCTGACGGTTGCGCATCTGCCTGCACACGGTAATGGATTCCTGACCGCATACTGGTGATGTGATGCCTGGTGAAGCGAGGGAGTTTGACACTCCGCACATACTGCTCCAGCAGGAGGGTGGCATCCTGAACTGATATTGTGTCCGAAGCAACTGTGGACCNGTCCNGAGTCGGAATCTCTCAAGCGCATTGCCGCGGAAACGTACGCGCAGATGGACCCGAATCTGGACCTCATGAACGGTATGCCGAACCCTGTGGCGGTTTTGGCAACGGAAAGCGCCACCAGTGAGCGTAACCCGACAGCAAGCCGATAAACGTGTGTNGAAAGTCCGGACAAAACAGTGACGATGCAAACGGAAGCAACTGGTACTGNCTCTTAGCTTAGTTAGCAAGAGTTAGCAATCGGAACAGAACATCACGCGCCTAGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6688#0 CCGGATTCAGTTCCACAACATGTCACTTTGCTACGAGCAGGACGCACCGCCGGTGCTGAA 60
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 GAACCTCGAGCTTGTGATCGAACCCACGTGGAAGGTGGGAATCGTCGGTCGAACCGGGGC 120
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 CGGCAAATCGTCCCTCATCGGGGCCCTCTTCCGGTTGGCACGCATTGAAGGGCGCATCAT 180
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 GATTGATGGCATCGATACGGGTGTGATTTCGCTGGAAGCGTTACGCTCGAAGATATCGAT 240
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 CATCCCGCAGGATCCGGTACTGTTCAGCGCCACCATACGCTACAATCTCGATCCGTTCAG 300
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 CCTGTACGACGACGACATGCTGTGGCGTGCGATCGGCGAAGTCGAGCTACGGTCCGCCAT 360
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 CAGTGGGTTGGACTTTATGGTGACAGAAGGTGGTACCAACTTCAGTGTCGGCCAGCGGCA 420
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 ACTAATCTGTCTCGCGCGAGCAATTCTGCGCAATAACAAAATACTGGTGCTTGACGAGGC 480
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 GACTGCCAACGTAGATCCTCAGACGGATGCACTGATACAGAAAACGATCCGGGAGAAGTT 540
consensus_6688#1 --------------------------------------------GAATCCCCCGAGGTTT 16
**** **
consensus_6688#0 CAAGCACTGTACGGTGCTAACGGTTGCGCATC-GCCTGCACACGGTAATGGATTCC-GAC 598
consensus_6688#1 TATGCACTGTACGGTGCTGACGGTTGCGCATCTGCCTGCACACGGTAATGGATTCCTGAC 76
* *************** ************* *********************** ***
consensus_6688#0 CGCATACTGGTGATG-GATGCC-GGTGAAGCGAGGGAGTTTGACACTCCGCACATACTGC 656
consensus_6688#1 CGCATACTGGTGATGTGATGCCTGGTGAAGCGAGGGAGTTTGACACTCCGCACATACTGC 136
*************** ****** *************************************
consensus_6688#0 TCCAGCAGGAGGGTGGCATCCTGAAG-GATATGGT---CGAAGCAACGG--GACCG--TC 708
consensus_6688#1 TCCAGCAGGAGGGTGGCATCCTGAACTGATATTGTGTCCGAAGCAACTGTGGACCNGTCC 196
************************* ***** ** ********* * **** *
consensus_6688#0 CGAGTCGGAATCTCTCAAGCGCATTGCCGCGGAAACGTACGCGCAGATGGACCCGAATCG 768
consensus_6688#1 NGAGTCGGAATCTCTCAAGCGCATTGCCGCGGAAACGTACGCGCAGATGGACCCGAATCT 256
**********************************************************
consensus_6688#0 GCACCTCATGAACGGTATGCCGAACCC-GTGGCGGTTT-GGCAA--GGAAGCGCCAC-AG 823
consensus_6688#1 GGACCTCATGAACGGTATGCCGAACCCTGTGGCGGTTTTGGCAACGGAAAGCGCCACCAG 316
* ************************* ********** ***** * ********* **
consensus_6688#0 TGAGCGTAACCCCGACAGCAAGC-GATAAGTGTGTGAAG-----TCGGACAAA-CAGTGA 876
consensus_6688#1 TGAGCGTAACCC-GACAGCAAGCCGATAAACGTGTGTNGAAAGTCCGGACAAAACAGTGA 375
************ ********** ***** ***** * ******** ******
consensus_6688#0 CGATGAAA--GGAAGCAACTGGTACTGCCTCTTAGCTTAGTTAG-AAGAGTTAG-AATCG 932
consensus_6688#1 CGATGCAAACGGAAGCAACTGGTACTGNCTCTTAGCTTAGTTAGCAAGAGTTAGCAATCG 435
***** ** ***************** **************** ********* *****
consensus_6688#0 GAACAGAACATCACGCGCCTAGAGCCATTCAACAGTGAGCGCATATTGAAATGCGTTTTT 992
consensus_6688#1 GAACAGAACATCACGCGCCTAGAG------------------------------------ 459
************************
consensus_6688#0 TTAAAATATGGAATGCTTTTGCATTGTGTTTGAGTTTAACTGATGTAGTTGATAGCGTTT 1052
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 ATTGCTCTTACTATCTTACTATTTACCAGTGTATGCGGTACTTTAACAATGGAACGACGA 1112
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 ACGACCTACAAAACTAAATGTACTTTAACTGTTAAGCGTTACGAAGGGCGTTGTTGAAAA 1172
consensus_6688#1 ------------------------------------------------------------
consensus_6688#0 TGGCCAAATGTTTACAACGAAATAAAACACAATTATTTTTAAAAAAAA 1220
consensus_6688#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||