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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 849 fasta sequence
[ATTATTGTTACTACTATAAGGCGATGTGTTGCTGTAGCTTCCGCATCATATATGAGAGTGTAATTGAAACTTAACATATATTTTTTTACTGTTTATTTTATTGTTTGCATTTAAGCTGTGGCATGGCTGAAGCTTGAGGAAAAAGGAAAAGCAAGGAAGCATAGCAGGTGGGGTGTCAGAGATGAACGACAAACAGCAAATCGAAAATATACACTCACTGCACTTAATAACGACGCATTAAAGGAGATAGAGCTAACGTGGAGAGGTTAAAGCAAATGAATAAAATTAAAATATTAAGCTAAGAGAACGTGTAAGCAGAAGAAGAAAACAACAAGCAGCGGTGAGGAGGAAAGGGAANATAATAGCGTGTAAAGGAAAGGAAGGGATGTGGAANACAAATAGCAAGCAATCGGACTAACTTGGAAAAGGGACTGTCCANAGACGCGCCANACTGTCGTGTGCGTGCGTGTGTGTGGTGTATGATGGTTGCAGTAGTTGTTTGTCGCACGATCGACGTTGTCTGTCGATCGTGTGTCATGTGAATTCCGTTTTGGATTTTCGCCGTTGTTTTGCGTTTCAATGATTGCGCTCTGCATGTGTGTATGTGTGTCAGCGAGGTTGGCGCAAATAGTAGAACGGGTTGGTTAAATGCAGCTTACACGCAGAAGGACCATTGTCGAGGGAGAGTTGCAAACGCAAATTGATTCTTTCGGCAAAATACGTACGTGTTATGTGTTTGTGTAGGCGGTTTTAAAAACAATTCCTTGCAGAACCTTTTTTTTATTACTTTTATATTAAGCTAGATTTTTATCCCCAATGTAAAGTGGTTGCTGTCTTTGTTTGGATTTG]
[+] EMBL BX623393 [ATTATTGTTACTACTATAAGGCGATGTGTTGCTGTAGCTTCCGCATCATATATGAGAGTGTAATTGAAACTTAACATATATTTTTTTACTGTTTATTTTATTGTTTGCATTTAAGCTGTGGCATGGCTGAAGCTTGAGGAAAAAGGAAAAGCAAGGAAGCATAGCAGGTGGGGTGTCAGAGATGAACGACAAACAGCAAATCGAAAATATACACTCACTGCACTTAATAACGACGCATTAAAGGAGATAGAGCTAACGTGGAGAGGTTAAAGCAAATGAATAAAATTAAAATATTAAGCTAAGAGAACGTGTAAGCAGAAGAAGAAAACAACAAGCAGCGGTGAGGAGGAAAGGGAANATAATAGCGTGTAAAGGAAAGGAAGGGATGTGGAANACAAATAGCAAGCAATCGGACTAACTTGGAAAAGGGACTGTCCANAGACGCGCCANACTGTCGTGTGCGTGCGTGTGTGTGGTGTATGATGGTTGCAGTAGTTGTTTGTCGCACGATCGACGTTGTCTGTCGATCGTGTGTCATGTGAATTCCGTTTTGGATTTTCGCCGTTGTTTTGCGTTTCAATAATTGCGCTCTGCATGTGTGTATGTGTGTCAGCGAGGTTGGCGCAAATAGTANAACGGGTTGGTTAAATGCAGCATACACGCAGAAGGACCATTGTCGAGGGAGAGTTGCAAACGCAAATTGATTCTTTCGGCAAAATACGTACGTGTTAT ]
[+] EMBL BX609215 [ AGCTGTGGCATGGCTGAAGCTTGAGGAAAAAGGAAACGCAAGGAAGCATAGCAGGTGGGGTGTCAGAGATGAACGACAAACAGCAAATCGAAAATATACACTCACTGCACTTAATAACGACGCATTCAAGGAGATAGAGCTAACGTGGAGAGGTTAAAGCAAATGAATAAAATTAAAATATTAAGCTAAGAGAACGTGTAAGCAGAAGAAGAAAACAACAAGCAGCGGTGAGGAGGAAAGGCAAGATAATAGCGTGTAAAGGAAAGGAAGGGATGTGGAAGACAAATAGTAAGCAATCGGACTAACTTGGAAAAGGGACTGTCCAGAGACGCGCCAGACTGTCGTGTGCGTGCGTGTGTGTGGTGTATGATGGTTGCAGTAGTTGTTTGTTGCACGATCGTCGTTGTCTGTCGATCGTGTGTCATGTGAATTCCGTTTTGGATTTTCGCCGTTGTTTTGCGTTTCAATGATTGCGCTCTGCATGTGTGTATGTGTGTCAGCGAGGTTGGCGCAAATAGTAGAACGGGTTGGTTAAATGCAGCTTACACGCAGAAGGACCATTGTCGAGGGAGAGTTGCAAACGCAAATTGATTCTTTCGGCAAAATACGTACGTGTTATGTGTTTGTGTAGGCGGTTTTAAAAACAATTCCTTGCAGAACCTTTTTTTTATTACTTTTATATTAAGCTAGATTTTTATCCCCAATGTAAAGTGGTTGCTGTCTTTGTTTGGATTTG]
[+] EMBL BX612283 [ TTGGATTTTCGCCGTTGTTTTGCGTTTCAATGATTGCGCTCTGCATGTGTGTATGTGTGTCAGCGAGGTTGGCGCAAATAGTAGAACGGGTTGGTTAAATGCAGCTTACACGCAGAAGGACCATTGTCGAGGGAGAGTTGCAAACGCAAATTGATTCTTTCGGCAAAATACGTACGTGTTATGTGTTT ]
consensusID : consensus_6699#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 805 fasta sequence
[TATATTTTTTTACTGTTTATTTTATTGTTTGCATTTAAGCTGTGGCATGGCTGAAGCTTGAGGAAAAAGGAAAAGCAAGGAAGCATAGCAGGTGGGGTGTCAGAGATGAACGACAAACAGCAAATCGAAAATATTCACTCACTGCACTTAATAACGACGCATTAAAGGAGATAGAGCTAACGTGGAGAGGTTAAAGCAAAAGAATAAAATTAAAATATTAAGCTAAGAGAACGTGTAAGCAGAAGAAGAAAACAACAAGCAGCGGTGAGGAGGAAAGGCAAGATAATAGCGTGTAAAGGAAAGGAAGGGATGTGGAAGACAAATAGCAAGCAATCGGACTAACTTGGAAAAGGGACTGTCCAGAGACGCGCCAGACTGTCGTGTGCGTGCGTGTGTGTGGTGTATGTATGATGGTTGCAGTAGTTGTTTGTCGCACGATCGTCGTTGTCTGTCGATCGTGTGTCATGTGAATTCCGTTTTGGATTTTCGCCGTTGTTTTGCGTTTCCATGATTGCGCTCTGCGTGTGCGAGGTTGGCGCAAATAGTAGAACGGGTTGGTTAAATGCAGCTTACACGCAGAANGACCATTGTCGAGGGAGAGTTGCAAACGCAAATTGATTCTTTCGGCAAAATACGTACGTGTTATGTGTTTGTGTAGGCGGTTTTAAAAACAATTCCTTGCAGAACCTTTTTTTTATTACTTTTATATTAAGCTAGATTTTTATTCCCAATGTAAAGTGGTTGCTGTCTTTGTTTGGATTTGTTTTATTTTATTCTCAGTTTGCCGCCCCCAACCCCCTTTTTT]
[+] EMBL BX622366 [TATATTTTTTTACTGTTTATTTTATTGTTTGCATTTAAGCTGTGGCATGGCTGAAGCTTGAGGAAAAAGGAAAAGCAAGGAAGCATAGCAGGTGGGGTGTCAGAGATGAACGACAAACAGCAAATCGAAAATATTCACTCACTGCACTTAATAACGACGCATTAAAGGAGATAGAGCTAACGTGGAGAGGTTAAAGCAAAAGAATAAAATTAAAATATTAAGCTAAGAGAACGTGTAAGCAGAAGAAGAAAACAACAAGCAGCGGTGAGGAGGAAAGGCAAGATAATAGCGTGTAAAGGAAAGGAAGGGATGTGGAAGACAAATAGCAAGCAATCGGACTAACTTGGAAAAGGGACTGTCCAGAGACGCGCCAGACTGTCGTGTGCGTGCGTGTGTGTGGTGTATGTATGATGGTTGCAGTAGTTGTTTGTCGCACGATCGTCGTTGTCTGTCGATCGTGTGTCATGTGAATTCCGTTTTGGATTTTCGCCGTTGTTTTGCGTTTCCATGATTGCGCTCTGCGTGTGCGAGGTTGGCGCAAATAGTAGAACGGGTTGGTTAAATGCAGCTTACACGCAGAANGACCATT ]
[+] EMBL BM584761 [ ccGGAGATAGAGCTAACGTGGAGAGGTTAAAGCAAAAGAATAAAATTAAAATATTAAGCTAAGAGAACGTGTAAGCAGAAGAAGAAAACAACAAGCAGCGGTGAGGAGGAAAGGCAAGATAATAGCGTGTAAAGGAAAGGAAGGGATGTGGAAGACAAATAGCAAGCAATCGGACTAACTTGGAAAAGGGACTGTCCAGAGACGCGCCAGACTGTCGTGTGCGTGCGTGTGTGTGGTGTATGTATGATGGTTGCAGTAGTTGTTTGTCGCACGATCGTCGTTGTCTGTCGATCGTGTGTCATGTGAATTCCGTTTTGGATTTTCGCCGTTGTTTTGCGTTTCCATGATTGCGCTCTGCGTGTGCGAGGTTGGCGCAAATAGTAGAACGGGTTGGTTAAATGCAGCTTACACGCAGAAGGACCATTGTCGAGGGAGAGTTGCAAACGCAAATTGATTCTTTCGGCAAAATACGTACGTGTTATGTGTTTGTGTAGGCGGTTTTAAAAACAATTCCTTGCAGAACCTTTTTTTTATTACTTTTATATTAAGCTAGATTTTTATTCCCAATGTAAAGTGGTTGCTGTCTTTGTTTGGATTTGTTTTATTTTATTCTCAGTTTGCCGCCCCCAACCCCCTTTTTT]
[+] EMBL BX622958 [ TATGATGGTTGCAGTAGCTGCTTGTCGCACGATCGTCGTTGTCTGTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6699#0 ATTATTGTTACTACTATAAGGCGATGTGTTGCTGTAGCTTCCGCATCATATATGAGAGTG 60
consensus_6699#1 ------------------------------------------------------------
consensus_6699#0 TAATTGAAACTTAACATATATTTTTTTACTGTTTATTTTATTGTTTGCATTTAAGCTGTG 120
consensus_6699#1 ----------------TATATTTTTTTACTGTTTATTTTATTGTTTGCATTTAAGCTGTG 44
********************************************
consensus_6699#0 GCATGGCTGAAGCTTGAGGAAAAAGGAAAAGCAAGGAAGCATAGCAGGTGGGGTGTCAGA 180
consensus_6699#1 GCATGGCTGAAGCTTGAGGAAAAAGGAAAAGCAAGGAAGCATAGCAGGTGGGGTGTCAGA 104
************************************************************
consensus_6699#0 GATGAACGACAAACAGCAAATCGAAAATATACACTCACTGCACTTAATAACGACGCATTA 240
consensus_6699#1 GATGAACGACAAACAGCAAATCGAAAATATTCACTCACTGCACTTAATAACGACGCATTA 164
****************************** *****************************
consensus_6699#0 AAGGAGATAGAGCTAACGTGGAGAGGTTAAAGCAAATGAATAAAATTAAAATATTAAGCT 300
consensus_6699#1 AAGGAGATAGAGCTAACGTGGAGAGGTTAAAGCAAAAGAATAAAATTAAAATATTAAGCT 224
************************************ ***********************
consensus_6699#0 AAGAGAACGTGTAAGCAGAAGAAGAAAACAACAAGCAGCGGTGAGGAGGAAAGGGAANAT 360
consensus_6699#1 AAGAGAACGTGTAAGCAGAAGAAGAAAACAACAAGCAGCGGTGAGGAGGAAAGGCAAGAT 284
****************************************************** ** **
consensus_6699#0 AATAGCGTGTAAAGGAAAGGAAGGGATGTGGAANACAAATAGCAAGCAATCGGACTAACT 420
consensus_6699#1 AATAGCGTGTAAAGGAAAGGAAGGGATGTGGAAGACAAATAGCAAGCAATCGGACTAACT 344
********************************* **************************
consensus_6699#0 TGGAAAAGGGACTGTCCANAGACGCGCCANACTGTCGTGTGCGTGCGTGTGTGTGGTGTA 480
consensus_6699#1 TGGAAAAGGGACTGTCCAGAGACGCGCCAGACTGTCGTGTGCGTGCGTGTGTGTGGTGTA 404
****************** ********** ******************************
consensus_6699#0 TG----ATGGTTGCAGTAGTTGTTTGTCGCACGATCGACGTTGTCTGTCGATCGTGTGTC 536
consensus_6699#1 TGTATGATGGTTGCAGTAGTTGTTTGTCGCACGATCGTCGTTGTCTGTCGATCGTGTGTC 464
** ******************************* **********************
consensus_6699#0 ATGTGAATTCCGTTTTGGATTTTCGCCGTTGTTTTGCGTTTCAATGATTGCGCTCTGCAT 596
consensus_6699#1 ATGTGAATTCCGTTTTGGATTTTCGCCGTTGTTTTGCGTTTCCATGATTGCGCTCTGCGT 524
****************************************** *************** *
consensus_6699#0 GTGTGTATGTGTGTCAGCGAGGTTGGCGCAAATAGTAGAACGGGTTGGTTAAATGCAGCT 656
consensus_6699#1 GTG--------------CGAGGTTGGCGCAAATAGTAGAACGGGTTGGTTAAATGCAGCT 570
*** *******************************************
consensus_6699#0 TACACGCAGAAGGACCATTGTCGAGGGAGAGTTGCAAACGCAAATTGATTCTTTCGGCAA 716
consensus_6699#1 TACACGCAGAANGACCATTGTCGAGGGAGAGTTGCAAACGCAAATTGATTCTTTCGGCAA 630
*********** ************************************************
consensus_6699#0 AATACGTACGTGTTATGTGTTTGTGTAGGCGGTTTTAAAAACAATTCCTTGCAGAACCTT 776
consensus_6699#1 AATACGTACGTGTTATGTGTTTGTGTAGGCGGTTTTAAAAACAATTCCTTGCAGAACCTT 690
************************************************************
consensus_6699#0 TTTTTTATTACTTTTATATTAAGCTAGATTTTTATCCCCAATGTAAAGTGGTTGCTGTCT 836
consensus_6699#1 TTTTTTATTACTTTTATATTAAGCTAGATTTTTATTCCCAATGTAAAGTGGTTGCTGTCT 750
*********************************** ************************
consensus_6699#0 TTGTTTGGATTTG------------------------------------------ 849
consensus_6699#1 TTGTTTGGATTTGTTTTATTTTATTCTCAGTTTGCCGCCCCCAACCCCCTTTTTT 805
*************
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||