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Anopheles gambiae
cluster # 6709 cluster # 6709       Sequences # 6       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6709#0 length = 1410 sequences # 3  
consensus_6709#1 length = 977 sequences # 1  
consensus_6709#2 length = 711 sequences # 1  
consensus_6709#3 length = 559 sequences # 1  

consensusID : consensus_6709#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1410
fasta sequence
                              [CCGGGAGCTTTCCGATGCGAGCTTCAAGTTTCCGGTGCTATTTCAAGAGTGCAAGTACACAGTGTTCGTTCGTACCAGACCGTACTTCCGCGAGTTTCTCGAGAGGGTATCGCAAATGTTCGAGGTGATTCTCTTTACCGCCTCGAAGCGGGTCTATGCCGATAAGCTGCTCAATCTGCTTGATCCAGATCGCCGACTCATTAAATACCGTTTGTTCCGCGAGCATTGTGTCCTAGTCAACGGAAATTACATTAAAGATTTGACTATACTGGGCAGGGATCTTTCCAAGACCATCATCATTGATAATTCACCACAGGCATTTGGATACCAGCTGGAAAATGGTATACCAATAGAGAGTTGGTTCGTCGATCAGAGCGATTCGGAGTTGATGAAAATTTTACCATTTTTGGAACGGCTCGTTGAAATGCGCGAAGATGTTCGTCCTCACATTCGTGAAAAGTTCCGACTCTTTTCTTTCCTACCGCCAGATTAAACTTAATTCGTATCTAACGGCAATACATGTTGTTGACGGCAGCACCTTAGTTAATCTCACAATTTCATCTAATTAAGCACGTTTCACTCCAATTGTATTTATGTCAGCTGTTTTTTTTCTGGACTAGCGTCGTCAAGTGAAGTGTACAGACAAAGCCACTCAAGTAATATTTAATAGTTACGACGTTCAGTTTCAGTTAACTATTCTCTTTTATTAAGCATACACAGATACAAACAAGCCTGCGCGCAAGGATGGTAGAAATGTGTGCAAGACACTTGGTGCTTGTGTGTATGTTATTGATGATACATTCATGTTTATGCGACACAAAAATAGTATGACAACATATGGATACAATGATACCGTTTTGCACAAGCATATAGTTTAACTGACAGATTTACTTAAGAAGGCAGACTGTGTAGACTGTGCTGCTAAACACATTCATGTTCAAATCTTAAACAAATCCACCAATTAACTCCATAATCCCCATACTCGAAACGACGAGAGCAGATTAGAAATGAAATCGATTTAATGAATAATTGTAGCAATATGAGAACTTTAGATGCTTAGCGTAATGTCCAACTCCTTGTCGTCGTTCAAGGAACGGAATTAATATGCATACAGGCGATGTATGATAATTTTGCTTTTGCCAGATCAGTGAATGAGCCCGTTATGGTGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGCAGCAAGACAAACGAATTGATAAATATGATATATAACGATCAAGAACAAATCAACAACCTGGGATGCCATAGCGAACAGAACAAATTACGAAAATATCAGATGCATTACTATTAACTATACTGCTGAAAGAATCACATGAGCACATGAATTACACGTATCTCAATACACACACACAGTTTAAACTCACCTTAGTCTAAATGTAAGAAAT]

[+] EMBL BM609305             [CCGGGAGCTTTCCGATGCGAGCTTCAAGTTTCCGGTGCTATTTCAAGAGTGCAAGTACACAGTGTTCGTTCGTACCAGACCGTACTTCCGCGAGTTTCTCGAGAGGGTATCGCAAATGTTCGAGGTGATTCTCTTTACCGCCTCGAAGCGGGTCTATGCCGATAAGCTGCTCAATCTGCTTGATCCAGATCGCCGACTCATTAAATACCGTTTGTTCCGCGAGCATTGTGTCCTAGTCAACGGAAATTACATTAAAGATTTGACTATACTGGGCAGGGATCTTTCCAAGACCATCATCATTGATAATTCACCACAGGCATTTGGATACCAGCTGGAAAATGGTATACCAATAGAGAGTTGGTTCGTCGATCAGAGCGATTCGGAGTTGATGAAAATTTTACCATTTTTGGAACGGCTCGTTGAAATGCGCGAAGATGTTCGTCCTCACATTCGTGAAAAGTTCCGACTCTTTTCTTTCCTACCGCCAGATTAAACTTAATTCGTATCTAACGGCAATACATGTTGTTGACGGCAGCACCTTAGTTAATCTCACAATTTCATCTAATTAAGCACGTTTCACTCCAATTGTATTTATGTCAGCTGTTTTTTTTCTGGACTAGCGTCGTCAAGTGAAGTGTACAGACAAAGCCACTCAAGTAATATTTAATAGTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM608962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgAGTTAATCTCACAATTTCATCTAATTAAGCACGTTTCACTCCAATTGTATTTATGTCAGCTGTTTTTTTTCTGGACTAGCGTCGTCAAGTGAAGTGTACAGACAAAGCCACTCAAGTAATATTTAATAGTTACGACGTTCAGTTTCAGTTAACTATTCTCTTTTATTAAGCATACACAGATACAAACAAGCCTGCGCGCAAGGATGGTAGAAATGTGTGCAAGACACTTGGTGCTTGTGTGTATGTTATTGATGATACATTCATGTTTATGCGACACAAAAATAGTATGACAACATATGGATACAATGATACCGTTTTGCACAAGCATATAGTTTAACTGACAGATTTACTTAAGAAGGCAGACTGTGTAGACTGTGCTGCTAAACACATTCATGTTCAAATCTTAAACAAATCCACCAATTAACTCCATAATCCCCATACTCGAAACGACGAGAGCAGATTAGAAATGAAATCGATTTAATGAATAATTGTAGCAATATGAGAACTTTAGATGCTTAGCGTAATGTCCAACTCCTTGTCGTCGTTCAAGGAACGGAATTAATATGCATACAGGCGATGTATGATAATTTTGCTTTTGCCAGATCAGTGAATGAGCCCGTTATGGTGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGCAGCAAGACAAACGAATTGATAAATATGATATATAACGATCAAGAACAAA                                                                                                                                                               ]
[+] EMBL BX608894             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACAGATACAAACAAGCCTGCGCGCAAGGATGGTAGAAATGTGCGCGAGACACTTGGTGCTTGTGTGTATGTTATTGATGATACATTCATGTTTATGCGATACAAAAATAGTATGACAACATATGGATACAATGATACCGTTTTGCACAAGCATATAGTTTAACTGACAGATTTACTTAAGAAGGCAGACTGTGTAGACTGTGCTGCTAAACACATTCATGTTCAAATCTTAAACAAATCCACCAATTAACTCCATAATCCCCATACTCGAAACGACGAGAGAAGATTAGAAATGAAATCGATTTAATGAATAAATGTAGCAATATGAGAACTTTAGATGCTTAGCGTAATGTCCAACT CTTGTCGTCGTTCAAGGAACGGAATTAATATACATACAGGCGATGTATGATAAATTTGCTTTTGCCAGATCAGTGAATGAGCCCGTTATGGTGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGCAGCAAGACAAACGAATTGATAAATATGATATATAACGATCAAAAACAAATCAACAACCTGGGATGCCATAGCGAACAGAACAAATTACGAAAATATCAGATGCATTACTATTAACTATACTGCTGAAAGAATCACATGAGCACATGAATTACACGTATCTCAATACACACACACAGTTTAAACTCACCTTAGTCTAAATGTAAGAAAT]


>consensus_6709#0 CCGGGAGCTTTCCGATGCGAGCTTCAAGTTTCCGGTGCTATTTCAAGAGTGCAAGTACAC AGTGTTCGTTCGTACCAGACCGTACTTCCGCGAGTTTCTCGAGAGGGTATCGCAAATGTT CGAGGTGATTCTCTTTACCGCCTCGAAGCGGGTCTATGCCGATAAGCTGCTCAATCTGCT TGATCCAGATCGCCGACTCATTAAATACCGTTTGTTCCGCGAGCATTGTGTCCTAGTCAA CGGAAATTACATTAAAGATTTGACTATACTGGGCAGGGATCTTTCCAAGACCATCATCAT TGATAATTCACCACAGGCATTTGGATACCAGCTGGAAAATGGTATACCAATAGAGAGTTG GTTCGTCGATCAGAGCGATTCGGAGTTGATGAAAATTTTACCATTTTTGGAACGGCTCGT TGAAATGCGCGAAGATGTTCGTCCTCACATTCGTGAAAAGTTCCGACTCTTTTCTTTCCT ACCGCCAGATTAAACTTAATTCGTATCTAACGGCAATACATGTTGTTGACGGCAGCACCT TAGTTAATCTCACAATTTCATCTAATTAAGCACGTTTCACTCCAATTGTATTTATGTCAG CTGTTTTTTTTCTGGACTAGCGTCGTCAAGTGAAGTGTACAGACAAAGCCACTCAAGTAA TATTTAATAGTTACGACGTTCAGTTTCAGTTAACTATTCTCTTTTATTAAGCATACACAG ATACAAACAAGCCTGCGCGCAAGGATGGTAGAAATGTGTGCAAGACACTTGGTGCTTGTG TGTATGTTATTGATGATACATTCATGTTTATGCGACACAAAAATAGTATGACAACATATG GATACAATGATACCGTTTTGCACAAGCATATAGTTTAACTGACAGATTTACTTAAGAAGG CAGACTGTGTAGACTGTGCTGCTAAACACATTCATGTTCAAATCTTAAACAAATCCACCA ATTAACTCCATAATCCCCATACTCGAAACGACGAGAGCAGATTAGAAATGAAATCGATTT AATGAATAATTGTAGCAATATGAGAACTTTAGATGCTTAGCGTAATGTCCAACTCCTTGT CGTCGTTCAAGGAACGGAATTAATATGCATACAGGCGATGTATGATAATTTTGCTTTTGC CAGATCAGTGAATGAGCCCGTTATGGTGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAG GCAGCAAGACAAACGAATTGATAAATATGATATATAACGATCAAGAACAAATCAACAACC TGGGATGCCATAGCGAACAGAACAAATTACGAAAATATCAGATGCATTACTATTAACTAT ACTGCTGAAAGAATCACATGAGCACATGAATTACACGTATCTCAATACACACACACAGTT TAAACTCACCTTAGTCTAAATGTAAGAAAT



consensusID : consensus_6709#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 977
fasta sequence
                              [GCCCCGAGGTTTAAACTTNAATGCTTAGCGTAATGNCAACTCTTGTNGTCGTTCAAGGAACGGAGATTAATATGCATACAGGCGATGTATGATAATTTNGCTGTTTCGCCAGATCAGTGAATGCAGCCCGTTATGGTAGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGNNAGNANGACTAAGACGAATTGATAAATATGATATATAACGATCAAGAACACAATCAANAACCTGGGATGCCATAGCGAACTAGAACAAATTACGCAAAATATCGAGATGCGATTACTATATAACGTATACTGCTGCAGAAGAATCACCATGAGCACCATGCAATTTACNCCGTCCTTCAANTACACACAGCACGANANGGTTTCAAGACTCCACCCTTAAGTTCACAGATNGTAAACGANAANTTGGACNAAATNACATTTTAAACGNGATTGCCGNGTGTCGAAATTGTNCGATCCTCCGATACATGTGACGAAAAAGGCGAAACAGGCAGGCGTACGCAGCAAGGGGTTACTTTACGGGACGATTGATNCTNNGTNTAATACCGAATGGAAATATCCTAGGCTTCAAACTCTCGATCACTCNACAACAACACACAATACGTANGAAGGCCGAAAGAACGATAGCAGAGTTAATACTTATNACNATNCACCGTTGNCNTTGCATTGACTTGGNACATCCATGCATACCGAAACCGGAANGCACTNCTGNTCGACACGTTANAGAACCNACANCTGTTTTGCCCTNTACCAGCAGCACATCCCTANCACAGGAAAAAATTAACNTCGTTAACTTACTCCTTNAACCCGGCTTAGCTCAAACGGGATGACATAACACTTAAATCACCACGCTNCTANCACACTATACAGCGCACCACTNGTGGATTAATTGAAACACTNACTCGCACAAATGGTGTGTNNCCACGAGGCACCTTTGACCGNGCCACACATTGTCCTTCCCGACCC]

[+] EMBL AL693737             [GCCCCGAGGTTTAAACTTNAATGCTTAGCGTAATGNCAACTCTTGTNGTCGTTCAAGGAACGGAGATTAATATGCATACAGGCGATGTATGATAATTTNGCTGTTTCGCCAGATCAGTGAATGCAGCCCGTTATGGTAGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGNNAGNANGACTAAGACGAATTGATAAATATGATATATAACGATCAAGAACACAATCAANAACCTGGGATGCCATAGCGAACTAGAACAAATTACGCAAAATATCGAGATGCGATTACTATATAACGTATACTGCTGCAGAAGAATCACCATGAGCACCATGCAATTTACNCCGTCCTTCAANTACACACAGCACGANANGGTTTCAAGACTCCACCCTTAAGTTCACAGATNGTAAACGANAANTTGGACNAAATNACATTTTAAACGNGATTGCCGNGTGTCGAAATTGTNCGATCCTCCGATACATGTGACGAAAAAGGCGAAACAGGCAGGCGTACGCAGCAAGGGGTTACTTTACGGGACGATTGATNCTNNGTNTAATACCGAATGGAAATATCCTAGGCTTCAAACTCTCGATCACTCNACAACAACACACAATACGTANGAAGGCCGAAAGAACGATAGCAGAGTTAATACTTATNACNATNCACCGTTGNCNTTGCATTGACTTGGNACATCCATGCATACCGAAACCGGAANGCACTNCTGNTCGACACGTTANAGAACCNACANCTGTTTTGCCCTNTACCAGCAGCACATCCCTANCACAGGAAAAAATTAACNTCGTTAACTTACTCCTTNAACCCGGCTTAGCTCAAACGGGATGACATAACACTTAAATCACCACGCTNCTANCACACTATACAGCGCACCACTNGTGGATTAATTGAAACACTNACTCGCACAAATGGTGTGTNNCCACGAGGCACCTTTGACCGNGCCACACATTGTCCTTCCCGACCC]


>consensus_6709#1 GCCCCGAGGTTTAAACTTNAATGCTTAGCGTAATGNCAACTCTTGTNGTCGTTCAAGGAA CGGAGATTAATATGCATACAGGCGATGTATGATAATTTNGCTGTTTCGCCAGATCAGTGA ATGCAGCCCGTTATGGTAGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGNNAGNANG ACTAAGACGAATTGATAAATATGATATATAACGATCAAGAACACAATCAANAACCTGGGA TGCCATAGCGAACTAGAACAAATTACGCAAAATATCGAGATGCGATTACTATATAACGTA TACTGCTGCAGAAGAATCACCATGAGCACCATGCAATTTACNCCGTCCTTCAANTACACA CAGCACGANANGGTTTCAAGACTCCACCCTTAAGTTCACAGATNGTAAACGANAANTTGG ACNAAATNACATTTTAAACGNGATTGCCGNGTGTCGAAATTGTNCGATCCTCCGATACAT GTGACGAAAAAGGCGAAACAGGCAGGCGTACGCAGCAAGGGGTTACTTTACGGGACGATT GATNCTNNGTNTAATACCGAATGGAAATATCCTAGGCTTCAAACTCTCGATCACTCNACA ACAACACACAATACGTANGAAGGCCGAAAGAACGATAGCAGAGTTAATACTTATNACNAT NCACCGTTGNCNTTGCATTGACTTGGNACATCCATGCATACCGAAACCGGAANGCACTNC TGNTCGACACGTTANAGAACCNACANCTGTTTTGCCCTNTACCAGCAGCACATCCCTANC ACAGGAAAAAATTAACNTCGTTAACTTACTCCTTNAACCCGGCTTAGCTCAAACGGGATG ACATAACACTTAAATCACCACGCTNCTANCACACTATACAGCGCACCACTNGTGGATTAA TTGAAACACTNACTCGCACAAATGGTGTGTNNCCACGAGGCACCTTTGACCGNGCCACAC ATTGTCCTTCCCGACCC



consensusID : consensus_6709#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 711
fasta sequence
                              [AGAATCGCCCGAGGTNAACAGCTGCGCGCAAGGGATGGTAGAAATGTGTGCAAGACACTTGGTGCTTGTGTGTATGTTATTGATGATACATTCATGTTTATGCGACACAAAAATAGTATGACAACATATGGATACAATGATACCGTTTTGCACAAGCATATAGTTTAACTGACAGATTTACTTAAGAAGGCAGACTGTGTAGACTGTGCTGCTAAACACATTCATGTTCAAATCTTAAACAAATCCACCAATTAACTCCATAATCCCCATACTCGAAACGACGAGAGCAGATTAGAAATGAAATCGATTTAATGAATAATTGTAGCAATATGAGAACTTTAGATGCTTAGCGTAATGTCCAACTCTTGTCGTCGTTCAAGGAACGGAATTAATATGCATACAGGCGATGTATGATAATTTTGCTTTTGCCAGATCAGTGAATGAGCCCGTTATGGTGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGCAGCAAGACAAACGAATTGATAAATATGATATATAACGATCAAGAACAAATCAACAACCTGGGATGCCATAGCGAACAGAACAAATTACGAAAATATCAGATGCATTACTATTAACTATACTGCTGAAAGAATCACATGAGCACATGAATTACACGTATCTCAATACACACACACACAAGTTTAAACTCACCTTAGTCTAAATGTACGAAATGGNCANATA]

[+] EMBL AL931404             [AGAATCGCCCGAGGTNAACAGCTGCGCGCAAGGGATGGTAGAAATGTGTGCAAGACACTTGGTGCTTGTGTGTATGTTATTGATGATACATTCATGTTTATGCGACACAAAAATAGTATGACAACATATGGATACAATGATACCGTTTTGCACAAGCATATAGTTTAACTGACAGATTTACTTAAGAAGGCAGACTGTGTAGACTGTGCTGCTAAACACATTCATGTTCAAATCTTAAACAAATCCACCAATTAACTCCATAATCCCCATACTCGAAACGACGAGAGCAGATTAGAAATGAAATCGATTTAATGAATAATTGTAGCAATATGAGAACTTTAGATGCTTAGCGTAATGTCCAACTCTTGTCGTCGTTCAAGGAACGGAATTAATATGCATACAGGCGATGTATGATAATTTTGCTTTTGCCAGATCAGTGAATGAGCCCGTTATGGTGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGCAGCAAGACAAACGAATTGATAAATATGATATATAACGATCAAGAACAAATCAACAACCTGGGATGCCATAGCGAACAGAACAAATTACGAAAATATCAGATGCATTACTATTAACTATACTGCTGAAAGAATCACATGAGCACATGAATTACACGTATCTCAATACACACACACACAAGTTTAAACTCACCTTAGTCTAAATGTACGAAATGGNCANATA]


>consensus_6709#2 AGAATCGCCCGAGGTNAACAGCTGCGCGCAAGGGATGGTAGAAATGTGTGCAAGACACTT GGTGCTTGTGTGTATGTTATTGATGATACATTCATGTTTATGCGACACAAAAATAGTATG ACAACATATGGATACAATGATACCGTTTTGCACAAGCATATAGTTTAACTGACAGATTTA CTTAAGAAGGCAGACTGTGTAGACTGTGCTGCTAAACACATTCATGTTCAAATCTTAAAC AAATCCACCAATTAACTCCATAATCCCCATACTCGAAACGACGAGAGCAGATTAGAAATG AAATCGATTTAATGAATAATTGTAGCAATATGAGAACTTTAGATGCTTAGCGTAATGTCC AACTCTTGTCGTCGTTCAAGGAACGGAATTAATATGCATACAGGCGATGTATGATAATTT TGCTTTTGCCAGATCAGTGAATGAGCCCGTTATGGTGGCCTACTGCTGGTGCCTGCTGCT GCTTACAAGGCAGCAAGACAAACGAATTGATAAATATGATATATAACGATCAAGAACAAA TCAACAACCTGGGATGCCATAGCGAACAGAACAAATTACGAAAATATCAGATGCATTACT ATTAACTATACTGCTGAAAGAATCACATGAGCACATGAATTACACGTATCTCAATACACA CACACACAAGTTTAAACTCACCTTAGTCTAAATGTACGAAATGGNCANATA



consensusID : consensus_6709#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 559
fasta sequence
                              [CGAGGCAAGAATTCGGCACGATGAGTCTAATGGAGCTTTCCGATGCGAGCTTCAAGTTTCCGGTGCTATTTCAAGAGTGCAAGTACACAGTGTTCGTTCGTACCAGACCGTACTTCCGCGAGTTTCTCGAAGAAGGGTATCGCAAATGTTCGAGGTGATTCTCTTTACCGCCTCGAAGCGGGTCTATGCCGATAAGCTGCTCAAATCTGCTTGATCCGGATCGCCGGACTCATTAAATACCGTTTGTTCCGCGAGCATTGTGTCCTAGTCAACGGAAATTACATTAAAGATTTGACTATACTGGGCAGGGATCTTTCCAAGACCATCATCATTGATAATTCACCACAGGCATTTGGATACCAGCTGGAAAATGGTATACCAATAGAGAGTTGGTTCGTCGATCAGAGTGATTCGGAGTTGATGAAANATTTTTACCCATTTGAGTGGGGAACAGGCNTCCGTTTGAAAATGCGGCGAAAGATAGTACCGTTCCGTNCAACAATTTCGGTGAAACACAGTTCCCGAGAACGTCACGTTANACTTATCNCCGTAACCGGCA]

[+] EMBL BX468881             [CGAGGCAAGAATTCGGCACGATGAGTCTAATGGAGCTTTCCGATGCGAGCTTCAAGTTTCCGGTGCTATTTCAAGAGTGCAAGTACACAGTGTTCGTTCGTACCAGACCGTACTTCCGCGAGTTTCTCGAAGAAGGGTATCGCAAATGTTCGAGGTGATTCTCTTTACCGCCTCGAAGCGGGTCTATGCCGATAAGCTGCTCAAATCTGCTTGATCCGGATCGCCGGACTCATTAAATACCGTTTGTTCCGCGAGCATTGTGTCCTAGTCAACGGAAATTACATTAAAGATTTGACTATACTGGGCAGGGATCTTTCCAAGACCATCATCATTGATAATTCACCACAGGCATTTGGATACCAGCTGGAAAATGGTATACCAATAGAGAGTTGGTTCGTCGATCAGAGTGATTCGGAGTTGATGAAANATTTTTACCCATTTGAGTGGGGAACAGGCNTCCGTTTGAAAATGCGGCGAAAGATAGTACCGTTCCGTNCAACAATTTCGGTGAAACACAGTTCCCGAGAACGTCACGTTANACTTATCNCCGTAACCGGCA]


>consensus_6709#3 CGAGGCAAGAATTCGGCACGATGAGTCTAATGGAGCTTTCCGATGCGAGCTTCAAGTTTC CGGTGCTATTTCAAGAGTGCAAGTACACAGTGTTCGTTCGTACCAGACCGTACTTCCGCG AGTTTCTCGAAGAAGGGTATCGCAAATGTTCGAGGTGATTCTCTTTACCGCCTCGAAGCG GGTCTATGCCGATAAGCTGCTCAAATCTGCTTGATCCGGATCGCCGGACTCATTAAATAC CGTTTGTTCCGCGAGCATTGTGTCCTAGTCAACGGAAATTACATTAAAGATTTGACTATA CTGGGCAGGGATCTTTCCAAGACCATCATCATTGATAATTCACCACAGGCATTTGGATAC CAGCTGGAAAATGGTATACCAATAGAGAGTTGGTTCGTCGATCAGAGTGATTCGGAGTTG ATGAAANATTTTTACCCATTTGAGTGGGGAACAGGCNTCCGTTTGAAAATGCGGCGAAAG ATAGTACCGTTCCGTNCAACAATTTCGGTGAAACACAGTTCCCGAGAACGTCACGTTANA CTTATCNCCGTAACCGGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6709#0      ------------------------------------------------------------
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      GCCCCGAGGTTTAAACTTNAATGCTTAGCGTAATGNCAACTCTTGTNGTCGTTCAAGGAA 60
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      ------------------------------------------------------------
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      CGGAGATTAATATGCATACAGGCGATGTATGATAATTTNGCTGTTTCGCCAGATCAGTGA 120
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      ------------------------------------------------------------
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ATGCAGCCCGTTATGGTAGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGNNAGNANG 180
consensus_6709#2      -----------------------------------------------------AGAATCG 7
                                                                                  

consensus_6709#0      ------------------------------------------------------------
consensus_6709#3      ------------------------------------------CGAGGCAAGAATTCGGCA 18
consensus_6709#1      ACTAAGACGAATTGATAAATATGATATATAACGATCAAGAACACAATCAANAACCTGGGA 240
consensus_6709#2      CCCGAGGTNAACAGCTGCGCGCAAGGGATGGTAGAAATGTGTGCA---AGACACTTGGTG 64
                                                                                  

consensus_6709#0      -----------CCGGGAGCTTTCCGATGCGAGCT-TCAAGTTTCCGGTGCTATTTCAAG- 47
consensus_6709#3      CGATG-AGTCTAATGGAGCTTTCCGATGCGAGCT-TCAAGTTTCCGGTGCTATTTCAAG- 75
consensus_6709#1      TGCCATAGCGAACTAG-AACAAATTACGCAAAATATCGAGATGCGATTACTATATAACG- 298
consensus_6709#2      CTTGTGTGTATGTTATTGATGATACATTCATGTTTATGCGACACAAAAATAGTATGACAA 124
                                               *  *    *     *   *        * * *   

consensus_6709#0      AGTGCAAGTACACAGTGTTCGTTCGTACCAGAC-CGTACTTCCGCGAGTTTCTCGAG--- 103
consensus_6709#3      AGTGCAAGTACACAGTGTTCGTTCGTACCAGAC-CGTACTTCCGCGAGTTTCTCGAAGA- 133
consensus_6709#1      TATACTGCTGCAGAAGAATCACCATGAGCAC-CATGCAATTTACNCCGTCCTTCAANTAC 357
consensus_6709#2      CATATGGATACAATGATACCGTTTTGCACAAGCATATAGTTTAACTGA-----CAGATTT 179
                        *     * **       *        **  *    * **            *      

consensus_6709#0      --AGGGTATCGCAAATGTTCGAGGTGATTCTCTTTACCGCCTCGAAGC-------GGGTC 154
consensus_6709#3      --AGGGTATCGCAAATGTTCGAGGTGATTCTCTTTACCGCCTCGAAGC-------GGGTC 184
consensus_6709#1      ACACAGCACGANANGGTTTCAAGACTCCACCCTTAAGTTCACAGATNGTAAACGANAANT 417
consensus_6709#2      ACTTAAGAAGGCAGACTGTGTAGACTGTGCTGCTAAACACATTCATGTTC----AAATCT 235
                             *    *     *  **      *   * *   *    *               

consensus_6709#0      TATGCCGATAAGCTGCTCAA-TCTGCTTGATCCAGATCGCCG-ACTCATTAAATACCGTT 212
consensus_6709#3      TATGCCGATAAGCTGCTCAAATCTGCTTGATCCGGATCGCCGGACTCATTAAATACCGTT 244
consensus_6709#1      TGGACNAAATNACATTTTAAA--CGNGATTGCCGNGT-GTCGAAATTGTNCGATCCTCCG 474
consensus_6709#2      TAAACAAATCCACCAATTAACTCCATAATCCCCATAC--TCGAAACGACGAGAGC----- 288
                      *   *  *    *   * **           **       ** *        *       

consensus_6709#0      TGTTCCGCGAGCATTGTGTCCTAGTCAACGGAAATT-ACATTAAAGATTTGACTATAC-- 269
consensus_6709#3      TGTTCCGCGAGCATTGTGTCCTAGTCAACGGAAATT-ACATTAAAGATTTGACTATAC-- 301
consensus_6709#1      ATACATGTGACGAAAAAGGCGAAACAGGCAGGCGTACGCAGCAAGGGGTT-ACTTTACGG 533
consensus_6709#2      AGATTAGAAATGAAATCGATTTAATGAATAATTGTA-GCAATATGAGA---ACTTTA--- 341
                            *  *  *    *    *           *   **  *        *** **   

consensus_6709#0      --TGGGCAGGGATCTTTCCAAGACC-------ATCATCATTGATAATTCAC-CACAGGCA 319
consensus_6709#3      --TGGGCAGGGATCTTTCCAAGACC-------ATCATCATTGATAATTCAC-CACAGGCA 351
consensus_6709#1      GACGATTGATNCTNNGTNTAATACCGAATGGAAATATCCTAGGCTTCAAACTCTCGATCA 593
consensus_6709#2      GATGCTTAGCGTAATGTCCAACTCT---TGTCGTCGTTCAAGGAACGGAATTAATATGCA 398
                         *            *  **  *            *    *       *        **

consensus_6709#0      TTTGGATACCAGCTGGAAAA---TGGTATACCAATAGAGAGTTGGTTC-GTCGATCAGAG 375
consensus_6709#3      TTTGGATACCAGCTGGAAAA---TGGTATACCAATAGAGAGTTGGTTC-GTCGATCAGAG 407
consensus_6709#1      CTCNACAACAACACACAATACGTANGAAGGCCGAAAGAACGATAGCAGAGTTAATACTTA 653
consensus_6709#2      TACAG--GCGATGTATGATA-ATTTTGCTTTTGCCAGATCAGTGAATGAGCCCGTTATGG 455
                              * *      * *               ***    *      *    *     

consensus_6709#0      CGATTCGGAGTTGATGAAAATTTTACCATTTT-TGGAACGGCTCGT-TGAAATGCGCGA- 432
consensus_6709#3      TGATTCGGAGTTGATGAAAN-------ATTTT-TA------CCCAT-TTGAGTGGGGAAC 452
consensus_6709#1      TNACNATNCACCGTTGNCNTTGCATTGACTTGGNACATCCATGCATACCGAAACCGGAAN 713
consensus_6709#2      TGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGCAGCAAGACAAACGAATTGATAAAT 515
                                  * **                           *      *       * 

consensus_6709#0      AGATGTTCGTCCTCAC----ATTCGTGAAAAGTTCCGACTCTTTTCTTTCCTACCGCCAG 488
consensus_6709#3      AGGCNTCCGTTTGAAA----ATGCGGCGAAAGATAGTACCGTTCCGTNCAACAATTTC-G 507
consensus_6709#1      GCACTNCTGNTCGACACGTTANAGAACCNACANCTGTTTTGCCCTNTACCAGCAGCACAT 773
consensus_6709#2      ATGATATATAACGATCAAGAACAAATCAACAACCTGGGATGCCATA-GCGAACAGAACAA 574
                                          *                                    *  

consensus_6709#0      ATTAAACTTAATTCGTATCTAACGGCAATACATGTTGTTGACGGCAGCACCTTAGTTAAT 548
consensus_6709#3      GTGAAACACAGTTC----CCGAGAACGTCACGTTANACTTATCNCCGTAACCGGCA---- 559
consensus_6709#1      CCCTANCACAGGAAAAAATTAACNTCGTTAACTTACTCCTTNAACCCGGCTTAGCTCAAA 833
consensus_6709#2      ----ATTAC--GAAAATATCAGATGCATTA-------CTATTAACTATACT--GCTGAAA 619
                          *                    *   *              *               

consensus_6709#0      CTCACAATTTCATCTAATTAAGCACGTTTCACTCCAATTGTATTTATGTCAGCTGTTTTT 608
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      CGGGATGACATAA-CACTTAAATCACCACGCTNCTANCACACTATACA-GCGCACCACTN 891
consensus_6709#2      --GAATCACATGAGCACATGAATTAC-ACG----TATCTCAATACACACACACACAAGTT 672
                                                                                  

consensus_6709#0      TTTCTGGACTAGCGTCGTCAAGTGAAGTGTACAGACAAAGCCACTCAAGTAATATTTAAT 668
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      GTGGATTAATTGAAACACTNACTCGCACAAATGGTGTGTNNCCACGAGGCACCTTTGACC 951
consensus_6709#2      -TAAACTCACCTTAGTCTAAATGTACGAAATGGNCANATA-------------------- 711
                                                                                  

consensus_6709#0      AGTTACGACGTTCAGTTTCAGTTAACTATTCTCTTTTATTAAGCATACACAGATACAAAC 728
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      GNGCCACACATTGTCCTTCCCGACCC---------------------------------- 977
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      AAGCCTGCGCGCAAGGATGGTAGAAATGTGTGCAAGACACTTGGTGCTTGTGTGTATGTT 788
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      ATTGATGATACATTCATGTTTATGCGACACAAAAATAGTATGACAACATATGGATACAAT 848
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      GATACCGTTTTGCACAAGCATATAGTTTAACTGACAGATTTACTTAAGAAGGCAGACTGT 908
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      GTAGACTGTGCTGCTAAACACATTCATGTTCAAATCTTAAACAAATCCACCAATTAACTC 968
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      CATAATCCCCATACTCGAAACGACGAGAGCAGATTAGAAATGAAATCGATTTAATGAATA 1028
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      ATTGTAGCAATATGAGAACTTTAGATGCTTAGCGTAATGTCCAACTCCTTGTCGTCGTTC 1088
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      AAGGAACGGAATTAATATGCATACAGGCGATGTATGATAATTTTGCTTTTGCCAGATCAG 1148
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      TGAATGAGCCCGTTATGGTGGCCTACTGCTGGTGCCTGCTGCTGCTTACAAGGCAGCAAG 1208
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      ACAAACGAATTGATAAATATGATATATAACGATCAAGAACAAATCAACAACCTGGGATGC 1268
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      CATAGCGAACAGAACAAATTACGAAAATATCAGATGCATTACTATTAACTATACTGCTGA 1328
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      AAGAATCACATGAGCACATGAATTACACGTATCTCAATACACACACACAGTTTAAACTCA 1388
consensus_6709#3      ------------------------------------------------------------
consensus_6709#1      ------------------------------------------------------------
consensus_6709#2      ------------------------------------------------------------
                                                                                  

consensus_6709#0      CCTTAGTCTAAATGTAAGAAAT 1410
consensus_6709#3      ----------------------
consensus_6709#1      ----------------------
consensus_6709#2      ----------------------
                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)