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Anopheles gambiae
cluster # 6742 cluster # 6742       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6742#0 length = 1061 sequences # 1  
consensus_6742#1 length = 741 sequences # 1  
consensus_6742#2 length = 714 sequences # 2  
consensus_6742#3 length = 662 sequences # 1  
consensus_6742#4 length = 271 sequences # 1  

consensusID : consensus_6742#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1061
fasta sequence
                              [GGTTNACTTCGTGTAGTCATCCGCTGACTTCAGTTNGTCGTGGTGTGTGCTCGTCTCTGTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACCGTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTCCACAATGAGCCGAAGACTGTGTTGGCGCTACTGCTGGTGGCCCTGGTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGCGTGGCATCTACCACGGGCTGCACGGGTTCGCCCTGGCCGGGCACGCGGCATCCCGCTGCACGGTGCTGCCCCATCGTTCCACAAGGGCTACCATCCCAGCCGTACGCCCCGGTTACCCAGGGCTGACCAAGGGTGCACNCAACGCTCGGTGGGTCGGGTGTTANCGCCGGGNTATGCGCTCTTCCCGGGCGGTGCCAGCGTCACNGTACATAACCAGCGCAACTTNCCCGCGCTATTCCGACGCTCTAACAGGGNCTGCGANGATCTAGTATNCAGGCCGGACNTAAGGAGTGGAGCCCGGNCAAGGCCGGCAATATAGCAGGAGAGCAGTAGAGGTNTAGNGACTCCAATACNACTAGCNGGCAGGATTTCAAANCGGAATAGATCNCACCGACCATGAACAAGTATAACACAGGGGAGTAATACCANAGATCGGGACCNCACNAAACGNAGACNAGGTANCAAACCGAAAGNAAANCCCCGAACGAACACCAGTAAGTACCCAAATANACNTATCNNTTCCCAATNCCCCACAAAAAANACNAATNNNCACANATCCAAAACNANACAACATAATAACACTNCAANNCCTTCTACNTNCAAATACANNACANATTACNATACAAAATAGATAATACACACAAAAACCAACATAAAACAAACAATATACAACAANNCAATATACCAAGANACTCATAATCNACTATATNNATTCTATTCAAATACCTACCACAACATCAACCATAAACACTAAACCAATNACAATTATNATACTAAT]

[+] EMBL AL696514             [GGTTNACTTCGTGTAGTCATCCGCTGACTTCAGTTNGTCGTGGTGTGTGCTCGTCTCTGTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACCGTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTCCACAATGAGCCGAAGACTGTGTTGGCGCTACTGCTGGTGGCCCTGGTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGCGTGGCATCTACCACGGGCTGCACGGGTTCGCCCTGGCCGGGCACGCGGCATCCCGCTGCACGGTGCTGCCCCATCGTTCCACAAGGGCTACCATCCCAGCCGTACGCCCCGGTTACCCAGGGCTGACCAAGGGTGCACNCAACGCTCGGTGGGTCGGGTGTTANCGCCGGGNTATGCGCTCTTCCCGGGCGGTGCCAGCGTCACNGTACATAACCAGCGCAACTTNCCCGCGCTATTCCGACGCTCTAACAGGGNCTGCGANGATCTAGTATNCAGGCCGGACNTAAGGAGTGGAGCCCGGNCAAGGCCGGCAATATAGCAGGAGAGCAGTAGAGGTNTAGNGACTCCAATACNACTAGCNGGCAGGATTTCAAANCGGAATAGATCNCACCGACCATGAACAAGTATAACACAGGGGAGTAATACCANAGATCGGGACCNCACNAAACGNAGACNAGGTANCAAACCGAAAGNAAANCCCCGAACGAACACCAGTAAGTACCCAAATANACNTATCNNTTCCCAATNCCCCACAAAAAANACNAATNNNCACANATCCAAAACNANACAACATAATAACACTNCAANNCCTTCTACNTNCAAATACANNACANATTACNATACAAAATAGATAATACACACAAAAACCAACATAAAACAAACAATATACAACAANNCAATATACCAAGANACTCATAATCNACTATATNNATTCTATTCAAATACCTACCACAACATCAACCATAAACACTAAACCAATNACAATTATNATACTAAT]


>consensus_6742#0 GGTTNACTTCGTGTAGTCATCCGCTGACTTCAGTTNGTCGTGGTGTGTGCTCGTCTCTGT GCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACC GTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTA CAAACGAGCTGTGTCCACAATGAGCCGAAGACTGTGTTGGCGCTACTGCTGGTGGCCCTG GTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGCGTGGCATCTACCACGGG CTGCACGGGTTCGCCCTGGCCGGGCACGCGGCATCCCGCTGCACGGTGCTGCCCCATCGT TCCACAAGGGCTACCATCCCAGCCGTACGCCCCGGTTACCCAGGGCTGACCAAGGGTGCA CNCAACGCTCGGTGGGTCGGGTGTTANCGCCGGGNTATGCGCTCTTCCCGGGCGGTGCCA GCGTCACNGTACATAACCAGCGCAACTTNCCCGCGCTATTCCGACGCTCTAACAGGGNCT GCGANGATCTAGTATNCAGGCCGGACNTAAGGAGTGGAGCCCGGNCAAGGCCGGCAATAT AGCAGGAGAGCAGTAGAGGTNTAGNGACTCCAATACNACTAGCNGGCAGGATTTCAAANC GGAATAGATCNCACCGACCATGAACAAGTATAACACAGGGGAGTAATACCANAGATCGGG ACCNCACNAAACGNAGACNAGGTANCAAACCGAAAGNAAANCCCCGAACGAACACCAGTA AGTACCCAAATANACNTATCNNTTCCCAATNCCCCACAAAAAANACNAATNNNCACANAT CCAAAACNANACAACATAATAACACTNCAANNCCTTCTACNTNCAAATACANNACANATT ACNATACAAAATAGATAATACACACAAAAACCAACATAAAACAAACAATATACAACAANN CAATATACCAAGANACTCATAATCNACTATATNNATTCTATTCAAATACCTACCACAACA TCAACCATAAACACTAAACCAATNACAATTATNATACTAAT



consensusID : consensus_6742#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 741
fasta sequence
                              [CCAGCAGATCGCCCACGTTATCGGTACTTAGTTTGGGCGTGTGTTGCTCGTCTCTGTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACGTTTGACCTCTGCTGGTGGTTTGACTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGACTGTGTCAAATGAGACGAAATGTGTTGGGCTATGTGGTGGCCTGTCGCGCTGGACCCAAGTCGATGAAAAAAAAAACGTGGATTACCAGGGCTGCACGGGTTCAGACCCTGAGACGGGAACAGCGGACAATCACGAATGNACAGNTGACTGCCCATCGTNCCACAAAGGGNTAACATCACCAGAACCGATACGACCACGGATTCCCAATGGATTGGANAANGGTGCAANACAAAGCATCNANATGAGATCAGGGATGAATACCGCCGGATAATGAGCAACATACCCGGGAGNATCCACNACGTNAAGGNCATAACCAGGACGAAANTANACCACNAANAAAAACCGAAACNNTCTAAGGNGGAANTGAAGCGTACANAATCCGGGCCGGCATNTGAGNATNGGCGCAGNGTTCAAAGCCAGGCAATCTTGGTGCGGCCGGANNGAGACTGAAGACACANCANCGNATACAGGAGAGAATCACAACANCACAGATCACCNCNCTGCAACTAAACCGGTGCTCTTCATNCNCAACGTNCGCCNCCCATCCGAAACGTAACGCA]

[+] EMBL AL693377             [CCAGCAGATCGCCCACGTTATCGGTACTTAGTTTGGGCGTGTGTTGCTCGTCTCTGTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACGTTTGACCTCTGCTGGTGGTTTGACTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGACTGTGTCAAATGAGACGAAATGTGTTGGGCTATGTGGTGGCCTGTCGCGCTGGACCCAAGTCGATGAAAAAAAAAACGTGGATTACCAGGGCTGCACGGGTTCAGACCCTGAGACGGGAACAGCGGACAATCACGAATGNACAGNTGACTGCCCATCGTNCCACAAAGGGNTAACATCACCAGAACCGATACGACCACGGATTCCCAATGGATTGGANAANGGTGCAANACAAAGCATCNANATGAGATCAGGGATGAATACCGCCGGATAATGAGCAACATACCCGGGAGNATCCACNACGTNAAGGNCATAACCAGGACGAAANTANACCACNAANAAAAACCGAAACNNTCTAAGGNGGAANTGAAGCGTACANAATCCGGGCCGGCATNTGAGNATNGGCGCAGNGTTCAAAGCCAGGCAATCTTGGTGCGGCCGGANNGAGACTGAAGACACANCANCGNATACAGGAGAGAATCACAACANCACAGATCACCNCNCTGCAACTAAACCGGTGCTCTTCATNCNCAACGTNCGCCNCCCATCCGAAACGTAACGCA]


>consensus_6742#1 CCAGCAGATCGCCCACGTTATCGGTACTTAGTTTGGGCGTGTGTTGCTCGTCTCTGTGCG CGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACGTTT GACCTCTGCTGGTGGTTTGACTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGA CTGTGTCAAATGAGACGAAATGTGTTGGGCTATGTGGTGGCCTGTCGCGCTGGACCCAAG TCGATGAAAAAAAAAACGTGGATTACCAGGGCTGCACGGGTTCAGACCCTGAGACGGGAA CAGCGGACAATCACGAATGNACAGNTGACTGCCCATCGTNCCACAAAGGGNTAACATCAC CAGAACCGATACGACCACGGATTCCCAATGGATTGGANAANGGTGCAANACAAAGCATCN ANATGAGATCAGGGATGAATACCGCCGGATAATGAGCAACATACCCGGGAGNATCCACNA CGTNAAGGNCATAACCAGGACGAAANTANACCACNAANAAAAACCGAAACNNTCTAAGGN GGAANTGAAGCGTACANAATCCGGGCCGGCATNTGAGNATNGGCGCAGNGTTCAAAGCCA GGCAATCTTGGTGCGGCCGGANNGAGACTGAAGACACANCANCGNATACAGGAGAGAATC ACAACANCACAGATCACCNCNCTGCAACTAAACCGGTGCTCTTCATNCNCAACGTNCGCC NCCCATCCGAAACGTAACGCA



consensusID : consensus_6742#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 714
fasta sequence
                              [GTTTGGGCGTGGTGTGTGCTCGTCTCTGTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACCGTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTCCACAATGAGCCGAAGACTGCTGTTGGCGCTACTGCTGGTGGCCCTGGTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGCGTGGCATCTACCACGGGCTGCACGGGTTCGCCCTGGCCGGGCACGCGGCCATCCCGCTGCACGGTGCTGCCCCATCGTTCCACAAGGGCTACCATCCCAGCCCGTACGCCCGGTTCCCAGGGCTGCACAAGGGTGCAGCAACGCTCGGTGGGTCGGTGCTACCGCCCGGCTATGCGCTCTTCCCGGGCGGTGCCAGCGTCACGTCCTACCAGCGCAACTTCCCGCGCTATCCGACCCTCTACGGGGCTGCGGGTCTGTATCCGGCCGGCTTTGGGGTGGCGCCGGTCAAGCCGGCATTTGCTGCGGCCGGTGGGTTTGTGCCTCCACTCGCTGCCGCCGGCTTCACACCGTACGCTCCCGCCCTGCCAGCCTACCCGGCCGCTCTGCCCGCCGTGNCGGNCGCCTATCCGCAAGCGTTCGTTCCGGTGGGAGCCCCGGCGGNCACCGGCAGCACCCAGCAG]

[+] EMBL BX621387             [GTTTGGGCGTGGTGTGTGCTCGTCTCTGTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACCGTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTCCACAATGAGCCGAAGACTGCTGTTGGCGCTACTGCTGGTGGCCCTGGTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGCGTGGCATCTACCACGGGCTGCACGGGTTCGCCCTGGCCGGGCACGCGGCCATCCCGCTGCACGGTGCTGCCCCATCGTTCCACAAGGGCTACCATCCCAGCCCGTACGCCCGGTTCCCAGGGCTGCACAAGGGTGCAGCAACGCTCGGTGGGTCGGTGCTACCGCCCGGCTATGCGCTCTTCCCGGGCGGTGCCAGCGTCACGTCCTACCAGCGCAACTTCCCGCGCTATCCGACCCTCTACGGGGCTGCGGGTCTGTATCCGGCCGGCTTTGGGGTGGCGCCGGTCAAGCCGGCATTTGCTGCGGCCGGTGGGTTTGTGCCTCCACTCGCTGCCGCCGGCTTCACACCGTACGCTCCCGCCCTGCCAGCCTACCCGGCCGCTCTGCCCGCCGTGNCGGNCGCCTATCCGCAAGCGTTCGTTCCGGTGGGAGCCCCGGCGGNCACCGGCAGCACCCAGCAG]
[+] EMBL BX622738             [                                                                                 TTGTAACCGTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTCCACAATGAGCCNAAGACTGCTGTTGGCGCTACTGCTGGTGGCCCTGGTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGCGTGGCATCTACCACGGGCTGCACGGGATCGCCCTGGCCGGGCACGCGGCCATCCCGCTGCACNGTG                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_6742#2 GTTTGGGCGTGGTGTGTGCTCGTCTCTGTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTG AACCGGCTAGTACCGGGGGTGTTGTAACCGTTTGACCCTCTGCCTGGTGGTTTGACCTTC TCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTCCACAATGAGCCGAAGA CTGCTGTTGGCGCTACTGCTGGTGGCCCTGGTCGCGCTGGACCCAACGTCCGCACTGCAG AAGAAGAAAAAGCGTGGCATCTACCACGGGCTGCACGGGTTCGCCCTGGCCGGGCACGCG GCCATCCCGCTGCACGGTGCTGCCCCATCGTTCCACAAGGGCTACCATCCCAGCCCGTAC GCCCGGTTCCCAGGGCTGCACAAGGGTGCAGCAACGCTCGGTGGGTCGGTGCTACCGCCC GGCTATGCGCTCTTCCCGGGCGGTGCCAGCGTCACGTCCTACCAGCGCAACTTCCCGCGC TATCCGACCCTCTACGGGGCTGCGGGTCTGTATCCGGCCGGCTTTGGGGTGGCGCCGGTC AAGCCGGCATTTGCTGCGGCCGGTGGGTTTGTGCCTCCACTCGCTGCCGCCGGCTTCACA CCGTACGCTCCCGCCCTGCCAGCCTACCCGGCCGCTCTGCCCGCCGTGNCGGNCGCCTAT CCGCAAGCGTTCGTTCCGGTGGGAGCCCCGGCGGNCACCGGCAGCACCCAGCAG



consensusID : consensus_6742#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 662
fasta sequence
                              [GAATCCCCGAGGTTAATGTTATTAGTGTGTNNCTTCGTGATTGAACCGGCTATACCGGGGGTGTTGTAACCTGTTTGAGCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTACCACAATGAGCCGAAGACTGCTGTTGGGCTACTTGCTTGGTAGTGCCCTGGTCGCAGCTGTGACCCAACTGTACGACTTGCNAGTAAAGCAAAGCAACAAAGCTGGTTGGCACATACTTAACCAAAGGGGGCTTGNAACTATGNTTANCGGACACTTAGAGCCGGAGGCGAACGGCGGGGACCAATCCACCAGGATTAGACACTGTGGGTTNGCCTNGGGCGCCCCCAATCCTGGTTTCCCCAACCCAATGATGGTGTTAAAGCCAATTACCCCGCAAGCACNCCNGGTACACNGCCCGCACNGGTGCTATCCCAAACGTTGGCTTTTGCGAACCAAATGTGGCGTTTGCCAAGNGACATAAACCTGGCACTTCCCGACGTATAGGGGTTTACNAGAGTACGCCTACAAAGCCGACACCGGGCGTTANATTAGCTGGCCATTCNCTTTATTCCCCAGGCTGGTTGTGTTGACCCACTAGCTCGTTCATTACTANGTTTCACNTTAAGACAAGTAT]

[+] EMBL AL695599             [GAATCCCCGAGGTTAATGTTATTAGTGTGTNNCTTCGTGATTGAACCGGCTATACCGGGGGTGTTGTAACCTGTTTGAGCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTACCACAATGAGCCGAAGACTGCTGTTGGGCTACTTGCTTGGTAGTGCCCTGGTCGCAGCTGTGACCCAACTGTACGACTTGCNAGTAAAGCAAAGCAACAAAGCTGGTTGGCACATACTTAACCAAAGGGGGCTTGNAACTATGNTTANCGGACACTTAGAGCCGGAGGCGAACGGCGGGGACCAATCCACCAGGATTAGACACTGTGGGTTNGCCTNGGGCGCCCCCAATCCTGGTTTCCCCAACCCAATGATGGTGTTAAAGCCAATTACCCCGCAAGCACNCCNGGTACACNGCCCGCACNGGTGCTATCCCAAACGTTGGCTTTTGCGAACCAAATGTGGCGTTTGCCAAGNGACATAAACCTGGCACTTCCCGACGTATAGGGGTTTACNAGAGTACGCCTACAAAGCCGACACCGGGCGTTANATTAGCTGGCCATTCNCTTTATTCCCCAGGCTGGTTGTGTTGACCCACTAGCTCGTTCATTACTANGTTTCACNTTAAGACAAGTAT]


>consensus_6742#3 GAATCCCCGAGGTTAATGTTATTAGTGTGTNNCTTCGTGATTGAACCGGCTATACCGGGG GTGTTGTAACCTGTTTGAGCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGT CTGAAGCGTGTACAAACGAGCTGTGTACCACAATGAGCCGAAGACTGCTGTTGGGCTACT TGCTTGGTAGTGCCCTGGTCGCAGCTGTGACCCAACTGTACGACTTGCNAGTAAAGCAAA GCAACAAAGCTGGTTGGCACATACTTAACCAAAGGGGGCTTGNAACTATGNTTANCGGAC ACTTAGAGCCGGAGGCGAACGGCGGGGACCAATCCACCAGGATTAGACACTGTGGGTTNG CCTNGGGCGCCCCCAATCCTGGTTTCCCCAACCCAATGATGGTGTTAAAGCCAATTACCC CGCAAGCACNCCNGGTACACNGCCCGCACNGGTGCTATCCCAAACGTTGGCTTTTGCGAA CCAAATGTGGCGTTTGCCAAGNGACATAAACCTGGCACTTCCCGACGTATAGGGGTTTAC NAGAGTACGCCTACAAAGCCGACACCGGGCGTTANATTAGCTGGCCATTCNCTTTATTCC CCAGGCTGGTTGTGTTGACCCACTAGCTCGTTCATTACTANGTTTCACNTTAAGACAAGT AT



consensusID : consensus_6742#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 271
fasta sequence
                              [GTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACCGTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTCCACAATGAGCCGAAGACTGCTGTTGGCGCTACTGCTGGTGGCCCTGGTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGTAAGCCCGGGGTCAAAGGCAGTGCCTCAATGGCAGTCGCTGCGCTC]

[+] EMBL BX628959             [GTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACCGTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGTACAAACGAGCTGTGTCCACAATGAGCCGAAGACTGCTGTTGGCGCTACTGCTGGTGGCCCTGGTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGTAAGCCCGGGGTCAAAGGCAGTGCCTCAATGGCAGTCGCTGCGCTC]


>consensus_6742#4 GTGCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAA CCGTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTG TACAAACGAGCTGTGTCCACAATGAGCCGAAGACTGCTGTTGGCGCTACTGCTGGTGGCC CTGGTCGCGCTGGACCCAACGTCCGCACTGCAGAAGAAGAAAAAGTAAGCCCGGGGTCAA AGGCAGTGCCTCAATGGCAGTCGCTGCGCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6742#1      CCAGCAGATCGCCCACGTTATCGGT-ACTTAGTTTGGGCGTG-TGT-TGCTCGTCTCTGT 57
consensus_6742#2      -------------------------------GTTTGGGCGTGGTGTGTGCTCGTCTCTGT 29
consensus_6742#0      GGTTNACTTCGTGTAGTCATCCGCTGACTTCAGTTNGTCGTGGTGTGTGCTCGTCTCTGT 60
consensus_6742#4      ----------------------------------------------------------GT 2
consensus_6742#3      -----------------------------------------------GAATCCCCGAGGT 13
                                                                                **

consensus_6742#1      GCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAAC- 116
consensus_6742#2      GCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACC 89
consensus_6742#0      GCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACC 120
consensus_6742#4      GCGCGTGTGTGTGTGTGTGTGCTTGTGATTGAACCGGCTAGTACCGGGGGTGTTGTAACC 62
consensus_6742#3      TAATGT-TATTAGTGTGTNNCTTCGTGATTGAACCGGCTA-TACCGGGGGTGTTGTAACC 71
                          ** * *  ******    * **************** ****************** 

consensus_6742#1      -GTTTGACC-TCTGC-TGGTGGTTTGAC-TTCTCGGTTTGTGTCTGTGTCTGAAGCGTGT 172
consensus_6742#2      -GTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGT 148
consensus_6742#0      -GTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGT 179
consensus_6742#4      -GTTTGACCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGT 121
consensus_6742#3      TGTTTGAGCCTCTGCCTGGTGGTTTGACCTTCTCGGTTTGTGTCTGTGTCTGAAGCGTGT 131
                       ****** * ***** ************ *******************************

consensus_6742#1      ACAAACGA-CTGTGT-CAA--ATGAGACGAAA--TG-TGTTGG-GCTATG----TGGTGG 220
consensus_6742#2      ACAAACGAGCTGTGT-CCACAATGAGCCGAAGACTGCTGTTGGCGCTACTG--CTGGTGG 205
consensus_6742#0      ACAAACGAGCTGTGT-CCACAATGAGCCGAAGACTG-TGTTGGCGCTACTG--CTGGTGG 235
consensus_6742#4      ACAAACGAGCTGTGT-CCACAATGAGCCGAAGACTGCTGTTGGCGCTACTG--CTGGTGG 178
consensus_6742#3      ACAAACGAGCTGTGTACCACAATGAGCCGAAGACTGCTGTTGG-GCTACTTGCTTGGTAG 190
                      ******** ****** * *  ***** ****   ** ****** ****      **** *

consensus_6742#1      --CCT--GTCGC-GCTG-GACCCAA-GTCGATG--------AAAAAAAAAACGTGGA--T 263
consensus_6742#2      --CCCTGGTCGC-GCTG-GACCCAACGTCCGCACTGCAGAAGAAGAAAAAGCGTGGCATC 261
consensus_6742#0      --CCCTGGTCGC-GCTG-GACCCAACGTCCGCACTGCAGAAGAAGAAAAAGCGTGGCATC 291
consensus_6742#4      --CCCTGGTCGC-GCTG-GACCCAACGTCCGCACTGCAGAAGAAGAAAAAGTAAGCCCGG 234
consensus_6742#3      TGCCCTGGTCGCAGCTGTGACCCAA---CTGTACGACT--TGCNAGTAAAGCAAAGCAAC 245
                        **   ***** **** *******   *                  ***          

consensus_6742#1      TACCA-GGGCTGCACGGGTTCAGACCCTGAGACGGGAACAGCGGACAATCACGAATGNAC 322
consensus_6742#2      TACCACGGGCTGCACGGGTTC--GCCCTG-GCCGGGCAC-GCGGCCA-TCCCGC-TGCAC 315
consensus_6742#0      TACCACGGGCTGCACGGGTTC--GCCCTG-GCCGGGCAC-GCGG-CA-TCCCGC-TGCAC 344
consensus_6742#4      GGTCAAAGGCAGTGC---------CTCAATGGCAGTCGCTGCGCTC-------------- 271
consensus_6742#3      AAAGCTGGTTGGCAC--------ATACTTAACCAAAGGGGGCTTGNAACTATGN-TTANC 296
                             *   *  *           *     *       **                  

consensus_6742#1      AGNTGAC--TGCCCATCGTNCCACAAAGGGNTAACATCACCAGAACCGATACGACCACGG 380
consensus_6742#2      -GGTGCT--GCCCCATCGTTCCACAA-GGGCTACCATCCC---AGCCCGTACGCCC---G 365
consensus_6742#0      -GGTGCT--GCCCCATCGTTCCACAA-GGGCTACCATCCC----AGCCGTACGCCC-CGG 395
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      GGACACTTAGAGCCGGAGGCGAACGGCGGGGACCAATCCACCAGGATTAGACACTGTGGG 356
                                                                                  

consensus_6742#1      ATTCCCAATGGATTGGANAANGGTGCAANACAAAGCATCNANATGAGATCAGGGATGAAT 440
consensus_6742#2      GTTCCCA--GGGCTGCACAAGGGTGCAGCA--ACGC-TCGGTG---GGTCGGTGC----T 413
consensus_6742#0      TTACCCA--GGGCTGACCAAGGGTGCA-CNCAACGC-TCGGTG---GGTCGGGTGT---T 445
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      TTNGCCTNGGGCGCCCCCAATCCTGGTTTCCCCAACCCAATGATGGTGTTAAAGCCAATT 416
                                                                                  

consensus_6742#1      ACCGCCGGATAATG--AGCAACATACCCGGGAGNATC--CACNACGTN-----AAGGNCA 491
consensus_6742#2      ACCGCCCGGCTATG--CGCT-CTTCCCGGGCGGTGCCAGCGTCACGTCCT---ACCAGCG 467
consensus_6742#0      ANCGCCGGGNTATG--CGCT-CTTCCCGGGCGGTGCCAGCGTCACNGTACATAACCAGCG 502
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      ACCCCGCAAGCACNCCNGGTACACNGCCCGCACNGGTGCTATCCCAAACGTTGGCTTTTG 476
                                                                                  

consensus_6742#1      TAACCAGG--ACGAAANTA-NACCACNAANAAAAAC-CGAAACNNTCTA------AGGNG 541
consensus_6742#2      CAACTTCCC-GCGCTATCC-GACCCTCTACGGGGCTGCGGGTCTGTATC------CGGCC 519
consensus_6742#0      CAACTTNCCCGCGCTATTCCGACGCTCTAACAGGGNCTGCGANGATCTAGTATNCAGGCC 562
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      CGAACCAAATGTGGCGTTT-GCCAAGNGACATAAACCTGGCACTTCCCGACGTATAGGGG 535
                                                                                  

consensus_6742#1      GAANTGAAGC----GTACANAATCCGGGCCGGCATNTGAGNATNGGCGCAGNGTTCAAAG 597
consensus_6742#2      GGCTTTGGGG----TGGCGCCGGTCAAGCCGGCATTTGC-TGCGGCCGGTGGGTTTGTGC 574
consensus_6742#0      GGACNTAAGGAGTGGAGCCCGGNCAAGGCCGGCAATATAGCAGGAGAGCAGTAGAGGTNT 622
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      TTTACNAGAG-----TACGCCTACAAAGCCGACACC-------GGGCGTTANATTAGCTG 583
                                                                                  

consensus_6742#1      CCAGGCAATCTTGGTGCGGCCGGANNGAGACTGAAGACACANCANCGNATACAGGAGAGA 657
consensus_6742#2      CTCCA----CTCGCTGCCGCCGGCTTCACACCGTACGCTCCCGCCCTGCCAGCCTACCCG 630
consensus_6742#0      AGNGACTCCAATACNACTAGCNGGCAGGATTTCAAANCGGAATAGATCNCACCGACCATG 682
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      GCCATTCNCTTTATTCC--CCAGGCTGGTTGTGTTGACCCACTAGCTCGTTCATTACTAN 641
                                                                                  

consensus_6742#1      ATCACAACANCACAGATCACCNCNCTGCAACTAAACCGGTGCTCTTCATNCNCAACGTNC 717
consensus_6742#2      GCCGCTCTGCCCGCCGTGNCGGNCGCCTATCCGCAAGCGTTCGTTCCGGTGGGAGC-CCC 689
consensus_6742#0      AACA-AGTATAACACAGGGGAGTAATACCANAGATCGGGACCNCACNAAACGNAGACNAG 741
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      GTTTCACNTTAAGACAAGTAT--------------------------------------- 662
                                                                                  

consensus_6742#1      GCCNCCCATCCGAAACGTAACGCA------------------------------------ 741
consensus_6742#2      GGCGGNCACCGGCAGCACCCAGCAG----------------------------------- 714
consensus_6742#0      GTANCAAACCGAAAGNAAANCCCCGAACGAACACCAGTAAGTACCCAAATANACNTATCN 801
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      ------------------------------------------------------------
                                                                                  

consensus_6742#1      ------------------------------------------------------------
consensus_6742#2      ------------------------------------------------------------
consensus_6742#0      NTTCCCAATNCCCCACAAAAAANACNAATNNNCACANATCCAAAACNANACAACATAATA 861
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      ------------------------------------------------------------
                                                                                  

consensus_6742#1      ------------------------------------------------------------
consensus_6742#2      ------------------------------------------------------------
consensus_6742#0      ACACTNCAANNCCTTCTACNTNCAAATACANNACANATTACNATACAAAATAGATAATAC 921
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      ------------------------------------------------------------
                                                                                  

consensus_6742#1      ------------------------------------------------------------
consensus_6742#2      ------------------------------------------------------------
consensus_6742#0      ACACAAAAACCAACATAAAACAAACAATATACAACAANNCAATATACCAAGANACTCATA 981
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      ------------------------------------------------------------
                                                                                  

consensus_6742#1      ------------------------------------------------------------
consensus_6742#2      ------------------------------------------------------------
consensus_6742#0      ATCNACTATATNNATTCTATTCAAATACCTACCACAACATCAACCATAAACACTAAACCA 1041
consensus_6742#4      ------------------------------------------------------------
consensus_6742#3      ------------------------------------------------------------
                                                                                  

consensus_6742#1      --------------------
consensus_6742#2      --------------------
consensus_6742#0      ATNACAATTATNATACTAAT 1061
consensus_6742#4      --------------------
consensus_6742#3      --------------------
                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)