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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6746#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1087 fasta sequence
[CTCCACCCGTTTACCCCCGCTCATCCCCGTTCCGGTAACACGGTAACACCGAAATGCCAACAGAAAGTGCCTCCAAAATCGCCGTTATTAGGCCGCATAGACGAATTAATTAATTTAGCACGTAAGCCATAGCCAAACGCGCTGGTGTGTGTGAGTGTGGATTAGAGAAGTAGTGTAGTGTCCCATTGTCGGGAAGCTGGGAGGTTTTTTTTGTCATCTTCATCTGTAAATACCGGCCAATTCCCCTAGTGCAGGCTAGTTTAGTAAGAACTCCTTTTTTATGGGCATAATAAGTACGCTCAAAAAGCTTCCCATTTTCACCTCATTTCCACCCATCCCATCATACACCCAGTCATATCTGTAGTATTGTCTTCCAACACGTGTGTGCCTAGAGAAAAACGAGTTCGAGTTACAAACAAAAAAGCTTAGCGAAGCGAAGATGATCTGTTTTTAGGATCAACAACGAAACAACAGGGTGTGTGTGAGTGGAAACGAAATTTCCAGTGAGTTGGATATCGTGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTTTCGGAATCCCTTCCCCCCCTACCTCGAAGGACTCTGATTCTCCCTTGCACCTAGACACATATCCTTCCGCGCGGCAAACGAATTTGCTTCCAACTGGCCGCCACCACCTTCCTACAGGGTTTTTTTTTGTTTTTGACGAATGCTTCCTTGCAAAATAGTAGAACAAAATGAACGATATTAGAAAGAATTAGTTAGATTGTAGCGTACGAGCGTAAGTTGTGTCGAGAAGCTTAGCAAAGATGCCTTAATGCATTTTAAATGAGATTGTTAAGATGAGATGATACAAAAACGAGGTCAAAATTTTTGAAGCATTTATAGCGAGTTTATACGAGTTGAAACACTTTTCTCTTGTTGGCTATAAAACGGGAAAGTAGTTTTGTTGTAAGGCCAACTTCTACTTGCTGTTTTTAGTTTTGTAGGTAATGCACGGCAAAATCCTGTGTTTGTGAGTCCTCTCTCTGTACATAGTGTAAGTAACCGAATAGTGGAGGAATGATGAAGAACACAGTTTGCCGTTCAATAAACAACG]
[+] EMBL BX627694 [CTCCACCCGTTTACCCCCGCTCATCCCCGTTCCGGTAACACGGTAACACCGAAATGCCAACAGAAAGTGCCTCCAAAATCGCCGTTATTAGGCCGCATAGACGAATTAATTAATTTAGCACGTAAGCCATAGCCAAACGCGCTGGTGTGTGTGAGTGTGGATTAGAGAAGTAGTGTAGTGTCCCATTGTCGGGAAGCTGGGAGGTTTTTTTTGTCATCTTCATCTGTAAATACCGGCCAATTCCCCTAGTGCAGGCTAGTTTAGTAAGAACTCCTTTTTTATGGGCATAATAAGTACGCTCAAAAAGCTTCCCATTTTCACCTCATTTCCACCCATCCCATCATACACCCAGTCATATCTGTAGTATTGTCTTCCAACACGTGTGTGCCTAGAGAAAAACGAGTTCGAGTTACAAACAAAAAAGCTTAGCGAAGCGAAGATGATCTGTTTTTAGGATCAACAACGAAACAACAGGGTGTGTGTGAGTGGAAACNAAATTTCCAGTGAGTTGGATATCGTGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTTTCGGAATCCCTTCCCCCCCTACCTCGAAGGACTCTGATTCTCCCTTGCACCTAGACACATATCCTTCCGCGCGGCAAATGAATTTGCTTCCAACTGGNCGCCACCACCTTCCTACAGGGTTTTTTTTTGTTTTTGACGAATGCTTCCTTGCAAAATAGTAGAACCAAATGAACGATATTAGAAAGAATTAGNTAGATTGTAGCGTACGA ]
[+] EMBL BX611656 [ CAACAGAAAGTGCCTCCAAAATCGCCGTTATTAGGCCGCATAGACGAATTAATTAATTTAGCACGTAAGCCATAGCCAAACGCGCTGGTGTGTGTGAGTGTGGATTAGAGAAGTAGTGTAGTGTCCCATTGTCGGGAAGCTGGGAGGTTTTTTTTGTCATCTTCATCTGTAAATACCGGCCAATTCCCCTAGTGCAGGCTAGTTTAGTAAGAACTCCTTTTTTATGGGCATAATAAGTACGCTCAAAAAGCTTCCCATTTTCACCTCATTTCCACCCATCCCATCATACACCCAGTCATATCTGTAGTATTGTCTTCCAACACGTGTGTGCCTAGAGAAAAACGAGTTCGAGTTACAAACAAAAAAGCTTAGCGAAGCGAAGATGATCTGTTTTTAGGATCAACAACGAAACAACAGGGTGTGTGTGAGTGGAAACGAAATTTCCAGTGAGTTGGATATCGTGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTTTCGGAATCCCTTCCCCCCCTACCTCGAAGGACTCTGATTCTCCCTTGCACCTAG ]
[+] EMBL BX621023 [ TGTGTGAGTGTGGATTAGAGAAGTAGTGTAGTGTCCCATTGTCGGGAAGCTGGGAGGTTTTTTTTGTCATCTTCATCTGTAAATACCGGCCAATTCCCCTAGTGCAGGCTAGTTTAGTAAGAACTCCTTTTTTATGGGCATAATAAGTACGCTCAAAAAGCTTCCCATTTTCACCTCATTTCCACCCATCCCATCATACACCCAGTCATATCTGTAGTATTGTCTTCCAACACGTGTGTGCCTAGAGAAAAACGAGTTCGAGTTACAAACAAAAAAGCTTAGCGAAGCGAAGATGATCTGTTTTTAGGATCAACAACGAAACAACAGGGTGTGTGTGAGTGGAAACGAAATTTCCAGTGAGTTGGATATCGTGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTTTCGGAATCCCTTCCCCCCCTACCTCGAAGGACTCTGATTCTCCCTTGCACCTAGACACATATCCTTCCGCGCGGCAAACGAATTTGCTTCCAACTGGCCGCCACCACCTTCCTACAGGGTTTTTTTTTGTTTTTGACGAATGCTTCCTTGCAAAATAGTAGAACAAAATGAACGATATTAGAAAGAATTAGTTAGATTGTAGCGTACGAGCGTAAGTTGTGTCGAGAAGCTTAGCAAAGATGCCTTAATGCATTTTAAATGAGATTGTTAAGAT ]
[+] EMBL BX614297 [ GTGCAGGCTAGTTTAGTAAGAACTCCTTTTTTATGGGCATAATAAGTACGCTCAAAAAGCTTCCCATTTTCACCTCATTTCCACCCATCCCATCATACACCCAGTCATATCTGTAGTATTGTCTTCCAACACGTGTGTGCCTAGAGAAAAACGAGTTCGAGTTACAAACAAAAAAGCTTAGCGAAGCGAAGATGATCTGTTTTTAGGATCAACAACGAAACAACAGGGTGTGTGTGAGTGGAAACGAAATTTCCAGTGAGTTGGATATCGTGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTTTCGGAATCCCTTCCCCCCCTACCTCGAAGGACTCTGATTCTCCCTTGCACCTAGACACATATCCTTCCGCGCGGCAAACGAATTTGCTTCCAACTGGCCGCCACCACCTTCCTACAGGGTTTTTTTTTGTTTTTGACGAATGCTTCCTTGCAAAATAGTAG ]
[-] EMBL BX611655 [ TCGAAGGACTTTGATTCTCCCTTGCACCTAGACACATATCCTTCCGCGCGGCAAACGAATTTGCTTCCAACTGGCCGCCACCACCTTCCTACAGGGTTTTTTTTTGTTTTTGACGAATGCTTCCTTGCAAAATAGTAGAACAAAATGAACGATATTAGAAAGAATTAGTTAGATTGTAGCGTACGAGCGTAAGTTGTGTCGAGAAGCTTAGCAAAGATGCCTTAATGCATTTTAAATGAGATTGTTAAGATGAGATGATACAAAAACGAGGTCAAAATTTTTGAAGCATTTATAGCGAGTTTATACGAGTTGAAACACTTTTCTCTTGTTGGCTATAAAACGGGAAAGTAGTTTTGTTGTAAGGCCAACTTCTACTTGCTGTTTTTAGTTTTGTAGGTAATGCACGGCAAAATCCTGTGTTTGTGAGTCCTCTCTCTGTACATAGTGTAAGTAACCGAATAGTGGAGGAATGATGAAGAACACAGTTTGCCGTTCAATAAACAACG]
consensusID : consensus_6746#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 762 fasta sequence
[CCAGGNTTANGCTGGTGTGTGTGAGTGTCGATACAGAAGTAGTGTANATGTCCCATTGTCGGGAAGCTGGGAGCGTTTNTTTTTTGTCATCTTCATCTGTAAATACCGGCCAATTCCCCTAGTGCAGGCTAGTTTATGTAAGAACTCCTTATTTATTGGGCATAATAAGTACGCTCAAAAAGCTTCCCATNTTCACCTCAGTTTCCACCCATCCCATCATACANCCAGCTCATATCTGTAGCTATTGTCTTCCAACACGATGTGTGCCTAGAGAAAAACGAGTTCGAGTTACAANCAAAAGAAGACTTAGTCGAAGCGAAGATGATCTGTGTTTGAGGATCAACAACGACANCAAGCACGGGTGTGTTGTGAGTGGAAACGAAATTTCCAGTGACCGTTCGGAGTATCGCTGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTATTACGGAATCCCTTACCCCCCCTACTCGAAGGACTACTGATTCTCCCTTGCAACTAGACACATATTCTTCCGCGCGGCAAACGAATTTTGCTTCCAACTGGCCCGGGCAAACCAACCTTTCCTAAGCAGGGGGTNTTCNTCTCTCGTCTATNGACGAAAGCTTCCTCTGNCCAACATAAGGTACGAACCCAACACATGCAACGATACTTCAGCACACGAAATTAGTTTAAGATTTGTTCGCGTACAGAACGTTAAGTTGGAGTACGAAGAAGCCTTAACGCACACAGNATGCCCTTAAATGCATTCTCAAAC]
[+] EMBL AL693329 [CCAGGNTTANGCTGGTGTGTGTGAGTGTCGATACAGAAGTAGTGTANATGTCCCATTGTCGGGAAGCTGGGAGCGTTTNTTTTTTGTCATCTTCATCTGTAAATACCGGCCAATTCCCCTAGTGCAGGCTAGTTTATGTAAGAACTCCTTATTTATTGGGCATAATAAGTACGCTCAAAAAGCTTCCCATNTTCACCTCAGTTTCCACCCATCCCATCATACANCCAGCTCATATCTGTAGCTATTGTCTTCCAACACGATGTGTGCCTAGAGAAAAACGAGTTCGAGTTACAANCAAAAGAAGACTTAGTCGAAGCGAAGATGATCTGTGTTTGAGGATCAACAACGACANCAAGCACGGGTGTGTTGTGAGTGGAAACGAAATTTCCAGTGACCGTTCGGAGTATCGCTGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTATTACGGAATCCCTTACCCCCCCTACTCGAAGGACTACTGATTCTCCCTTGCAACTAGACACATATTCTTCCGCGCGGCAAACGAATTTTGCTTCCAACTGGCCCGGGCAAACCAACCTTTCCTAAGCAGGGGGTNTTCNTCTCTCGTCTATNGACGAAAGCTTCCTCTGNCCAACATAAGGTACGAACCCAACACATGCAACGATACTTCAGCACACGAAATTAGTTTAAGATTTGTTCGCGTACAGAACGTTAAGTTGGAGTACGAAGAAGCCTTAACGCACACAGNATGCCCTTAAATGCATTCTCAAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6746#0 CTCCACCCGTTTACCCCCGCTCATCCCCGTTCCGGTAACACGGTAACACCGAAATGCCAA 60
consensus_6746#1 ------------------------------------------------------------
consensus_6746#0 CAGAAAGTGCCTCCAAAATCGCCGTTATTAGGCCGCATAGACGAATTAATTAATTTAGCA 120
consensus_6746#1 ------------------------------------------------------------
consensus_6746#0 CGTAAGCCATAGCCAAACGCGCTGGTGTGTGTGAGTGTGGATTAGAGAAGTAGTGTAG-T 179
consensus_6746#1 ------CCAGGNTTA----NGCTGGTGTGTGTGAGTGTCGAT-ACAGAAGTAGTGTANAT 49
*** * ****************** *** * ************ *
consensus_6746#0 GTCCCATTGTCGGGAAGCTGGGAGG---TTTTTTTTGTCATCTTCATCTGTAAATACCGG 236
consensus_6746#1 GTCCCATTGTCGGGAAGCTGGGAGCGTTTNTTTTTTGTCATCTTCATCTGTAAATACCGG 109
************************ * ******************************
consensus_6746#0 CCAATTCCCCTAGTGCAGGCTAGTTTA-GTAAGAACTCCTTTTTTAT-GGGCATAATAAG 294
consensus_6746#1 CCAATTCCCCTAGTGCAGGCTAGTTTATGTAAGAACTCCTTATTTATTGGGCATAATAAG 169
*************************** ************* ***** ************
consensus_6746#0 TACGCTCAAAAAGCTTCCCATTTTCACCTCA-TTTCCACCCATCCCATCATACACCCAG- 352
consensus_6746#1 TACGCTCAAAAAGCTTCCCATNTTCACCTCAGTTTCCACCCATCCCATCATACANCCAGC 229
********************* ********* ********************** ****
consensus_6746#0 TCATATCTGTAG-TATTGTCTTCCAACACG-TGTGTGCCTAGAGAAAAACGAGTTCGAGT 410
consensus_6746#1 TCATATCTGTAGCTATTGTCTTCCAACACGATGTGTGCCTAGAGAAAAACGAGTTCGAGT 289
************ ***************** *****************************
consensus_6746#0 TACAAACAAAAAAG--CTTAG-CGAAGCGAAGATGATCTGTTTTT-AGGATCAACAACGA 466
consensus_6746#1 TACAANCAAAAGAAGACTTAGTCGAAGCGAAGATGATCTGTGTTTGAGGATCAACAACGA 349
***** ***** * ***** ******************* *** **************
consensus_6746#0 AAC--AACA-GGGTGTGT-GTGAGTGGAAACGAAATTTCCAGTGA--GTT--GGATATCG 518
consensus_6746#1 CANCAAGCACGGGTGTGTTGTGAGTGGAAACGAAATTTCCAGTGACCGTTCGGAGTATCG 409
* * ** ******** ************************** *** * *****
consensus_6746#0 -TGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTTT--CGGAATCCCTTCCCCC 575
consensus_6746#1 CTGTCTTCGTGCTAATCGCGTATGCTGAATAAGACTGACTATTACGGAATCCCTTACCCC 469
*************************************** * *********** ****
consensus_6746#0 CCTACCTCGAAGGACT-CTGATTCTCCCTTGCACCTAGACACATATCCTTCCGCGCGGCA 634
consensus_6746#1 CCCTACTCGAAGGACTACTGATTCTCCCTTGCAACTAGACACATATTCTTCCGCGCGGCA 529
** *********** **************** ************ *************
consensus_6746#0 AACGAATTT-GCTTCCAACTGGCC--GCCA--CCA--CCTTCCTA--CAGGGTTTTTTTT 685
consensus_6746#1 AACGAATTTTGCTTCCAACTGGCCCGGGCAAACCAACCTTTCCTAAGCAGGGGGTNTTCN 589
********* ************** * ** *** * ****** ***** * **
consensus_6746#0 TGTTT------TTGACGAATGCTTCCTTGCAAAATAGTAGAACAAAATGAACGATATTAG 739
consensus_6746#1 TCTCTCGTCTATNGACGAAAGCTTCCT-------CTGNCCAACATAAGGTACGA-ACCCA 641
* * * * ****** ******* * **** ** * **** *
consensus_6746#0 AAAGAATTAGTTAGATTGTAGCGTACGAGCGTAAGTTGTGTCGAGAAGCTTAGCAAAGAT 799
consensus_6746#1 ACACATGCAACGATACTTCAGCACACGAAATTAGTTT--------AAGATTTGT-----T 688
* * * * * * * *** **** ** ** *** ** * *
consensus_6746#0 GCCTTAATGCATTTTAAATGAGATTGTTAAGATGAGATGATACAAAAACGAGGTCAAAAT 859
consensus_6746#1 CGCGTACAGAACGTTAAGTTGGAGTACGAAGAAGCCTTAACGCACACAGNATGCC----- 743
* ** * * **** * ** * **** * * * ** * * * * *
consensus_6746#0 TTTTGAAGCATTTATAGCGAGTTTATACGAGTTGAAACACTTTTCTCTTGTTGGCTATAA 919
consensus_6746#1 CTTAAATGCATTCTCAAAC----------------------------------------- 762
** * ***** *
consensus_6746#0 AACGGGAAAGTAGTTTTGTTGTAAGGCCAACTTCTACTTGCTGTTTTTAGTTTTGTAGGT 979
consensus_6746#1 ------------------------------------------------------------
consensus_6746#0 AATGCACGGCAAAATCCTGTGTTTGTGAGTCCTCTCTCTGTACATAGTGTAAGTAACCGA 1039
consensus_6746#1 ------------------------------------------------------------
consensus_6746#0 ATAGTGGAGGAATGATGAAGAACACAGTTTGCCGTTCAATAAACAACG 1087
consensus_6746#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||