These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_68#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 626 fasta sequence [CCACGCGTCCGCGGACGCGTGGGCTAGTTCTAGATCGTTATCGGCCCCTTATCGGTTGACGTACGAGCCGTGATCTTTTGCGAAGAGTGTCATTCCAGGCTTTATTCTTGCTAAAACGCTTAAGCTAAACACATGCTGTGACAGATTCGTTCGGTGACGGCTCGAAAAGTGAACCGGAAATGTGAGTGTCGTCTTCCAAGCGTGTGAATGTGTTTGTGTGTGTGTGTGAGAGTTTCACGGCTAGATTATTGTGCGTTGGTACTGTGAAGTGGAGCAAAATAGGAAAACGTAAGTGTTGCCACCAAACGGCACAACGCTGACAGATCCAAGCGCGCGCGAGAGTGTGTGAGTGCATTGTTAGTGCTGTATGTGTGCTTTGTGTGTGTGTAGAGCAGCTGCAAAAAGGGGTGACGTCCTTTGACGTTCAAAATCGCGGAATGTCAATCTAGTTCGGGCTCAGCGACTGAAACGCTGCTCTTGTATAGATAACCCCCCGTGCAGGAAGCAGGGCTAGCCCGATATCATTTTTCTTCCAAGCCGTGTGTGTTTGTCAGTGTCTGATTGTGTGTAGCTACAATAAAAGGAATAAGAAACAGGTGAAGTGAAGACAGGCGTAAGGAAAAAGG] [+] EMBL BM629584 [CCACGCGTCCGCGGACGCGTGGGCTAGTTCTAGATCGTTATCGGCCCCTTATCGGTTGACGTACGAGCCGTGATCTTTTGCGAAGAGTGTCATTCCAGGCTTTATTCTTGCTAAAACGCTTAAGCTAAACACATGCTGTGACAGATTCGTTCGGTGACGGCTCGAAAAGTGAACCGGAAATGTGAGTGTCGTCTTCCAAGCGTGTGAATGTGTTTGTGTGTGTGTGTGAGAGTTTCACGGCTAGATTATTGTGCGTTGGTACTGTGAAGTGGAGCAAAATAGGAAAACGTAAGTGTTGCCACCAAACGGCACAACGCTGACAGATCCAAGCGCGCGCGAGAGTGTGTGAGTGCATTGTTAGTGCTGTATGTGTGCTTTGTGTGTGTGTAGAGCAGCTGCAAAAAGGGGTGACGTCCTTTGACGTTCAAAATCGCGGAATGTCAATCTAGTTCGGGCTCAGCGACTGAAACGCTGCTCTTGTATAGATAACCCCCCGTGCAGGAAGCAGGGCTAGCCCGATATCATTTTTCTTCCAAGCCGTGTGTGTTTGTCAGTGTCTGATTGTGTGTAGCTACAATAAAAGGAATAAGAAACAGGTGAAGTGAAGACAGGCGTAAGGAAAAAGG] consensusID : consensus_68#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 527 fasta sequence [CCGAACAGGCCCACTGGGTAGGAGTGTCGTTATCGGTCGTTTATCGGTTGACGTACGAGCCGTGATCTTTTGCGAAGAGTGTCATTCCAGGCTTTATTCTTGCTAAAACGCTTAAGCTAAACACATGCTGTGACAGATTCGTTCGGTGACGGCTCGAAAAGTGAACCGGAAATGTGAGTGTCGTCTTCCAAGCGTGTGAATGTGTTTGTGTGTGTGTGTGAGAGTTTCACGGCTAGATTATTGTGCGTTGGTACTGTGAAGTGGAGCAAAATAGGAAAACGTAAGTGTTGCCACCAAACGGCACAACGCTGACAGATCCAAGCGCGCGCGAGAGTGTGTGAGTGCATTGTTAGTGCTGTATGTGTGCTTTGTGTGTGTGTAGAGCAGCTGCAAAAAGGGGTGACGTCCTTTGACGTTCAAAATCGCGGAATGTCAATCTAGTTCGGGCTCAGCGACTGAAACGCTGCTCTTGTATAGATAACCCCCCGTGCAGGAAGCAGGGCTAGCCCGATATCATTTTTCTTCCA] [+] EMBL BM632065 [CCGAACAGGCCCACTGGGTAGGAGTGTCGTTATCGGTCGTTTATCGGTTGACGTACGAGCCGTGATCTTTTGCGAAGAGTGTCATTCCAGGCTTTATTCTTGCTAAAACGCTTAAGCTAAACACATGCTGTGACAGATTCGTTCGGTGACGGCTCGAAAAGTGAACCGGAAATGTGAGTGTCGTCTTCCAAGCGTGTGAATGTGTTTGTGTGTGTGTGTGAGAGTTTCACGGCTAGATTATTGTGCGTTGGTACTGTGAAGTGGAGCAAAATAGGAAAACGTAAGTGTTGCCACCAAACGGCACAACGCTGACAGATCCAAGCGCGCGCGAGAGTGTGTGAGTGCATTGTTAGTGCTGTATGTGTGCTTTGTGTGTGTGTAGAGCAGCTGCAAAAAGGGGTGACGTCCTTTGACGTTCAAAATCGCGGAATGTCAATCTAGTTCGGGCTCAGCGACTGAAACGCTGCTCTTGTATAGATAACCCCCCGTGCAGGAAGCAGGGCTAGCCCGATATCATTTTTCTTCCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_68#0 CCACGCGTCCGCGGACGCGTGGGCTAGTTCTAGATCGTTATCGGCCCCTTATCGGTTGAC 60 consensus_68#1 ------CCGAACAGGCCCACTGGGTAGGAGTG--TCGTTATCGGTCGTTTATCGGTTGAC 52 * * * * ** *** * ********** * ************ consensus_68#0 GTACGAGCCGTGATCTTTTGCGAAGAGTGTCATTCCAGGCTTTATTCTTGCTAAAACGCT 120 consensus_68#1 GTACGAGCCGTGATCTTTTGCGAAGAGTGTCATTCCAGGCTTTATTCTTGCTAAAACGCT 112 ************************************************************ consensus_68#0 TAAGCTAAACACATGCTGTGACAGATTCGTTCGGTGACGGCTCGAAAAGTGAACCGGAAA 180 consensus_68#1 TAAGCTAAACACATGCTGTGACAGATTCGTTCGGTGACGGCTCGAAAAGTGAACCGGAAA 172 ************************************************************ consensus_68#0 TGTGAGTGTCGTCTTCCAAGCGTGTGAATGTGTTTGTGTGTGTGTGTGAGAGTTTCACGG 240 consensus_68#1 TGTGAGTGTCGTCTTCCAAGCGTGTGAATGTGTTTGTGTGTGTGTGTGAGAGTTTCACGG 232 ************************************************************ consensus_68#0 CTAGATTATTGTGCGTTGGTACTGTGAAGTGGAGCAAAATAGGAAAACGTAAGTGTTGCC 300 consensus_68#1 CTAGATTATTGTGCGTTGGTACTGTGAAGTGGAGCAAAATAGGAAAACGTAAGTGTTGCC 292 ************************************************************ consensus_68#0 ACCAAACGGCACAACGCTGACAGATCCAAGCGCGCGCGAGAGTGTGTGAGTGCATTGTTA 360 consensus_68#1 ACCAAACGGCACAACGCTGACAGATCCAAGCGCGCGCGAGAGTGTGTGAGTGCATTGTTA 352 ************************************************************ consensus_68#0 GTGCTGTATGTGTGCTTTGTGTGTGTGTAGAGCAGCTGCAAAAAGGGGTGACGTCCTTTG 420 consensus_68#1 GTGCTGTATGTGTGCTTTGTGTGTGTGTAGAGCAGCTGCAAAAAGGGGTGACGTCCTTTG 412 ************************************************************ consensus_68#0 ACGTTCAAAATCGCGGAATGTCAATCTAGTTCGGGCTCAGCGACTGAAACGCTGCTCTTG 480 consensus_68#1 ACGTTCAAAATCGCGGAATGTCAATCTAGTTCGGGCTCAGCGACTGAAACGCTGCTCTTG 472 ************************************************************ consensus_68#0 TATAGATAACCCCCCGTGCAGGAAGCAGGGCTAGCCCGATATCATTTTTCTTCCAAGCCG 540 consensus_68#1 TATAGATAACCCCCCGTGCAGGAAGCAGGGCTAGCCCGATATCATTTTTCTTCCA----- 527 ******************************************************* consensus_68#0 TGTGTGTTTGTCAGTGTCTGATTGTGTGTAGCTACAATAAAAGGAATAAGAAACAGGTGA 600 consensus_68#1 ------------------------------------------------------------ consensus_68#0 AGTGAAGACAGGCGTAAGGAAAAAGG 626 consensus_68#1 -------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||