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Anopheles gambiae
cluster # 6868 cluster # 6868       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6868#0 length = 1019 sequences # 4  
consensus_6868#1 length = 726 sequences # 2  

consensusID : consensus_6868#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1019
fasta sequence
                              [CACCAAGAACTGTTGGCCTACTGGCTGGGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGGACATGGTGGCGGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCCGTGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGCGGGCAACAATACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGGAGCTCGT-ACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATACGCAACGAGTGGACGGTACTT-CTGCGCAAGCT-CGAGGAGCACCGCCAGCTTCACACCATTGCGATCGAGTACTTCGAGCTGATCACCATGACCTGGGTGGATGGTCATAGGGGTTTCCTG]

[-] EMBL CNS09BYA             [CACCAAGAACTGTTGGCCTACTGGCTGGGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGGACATGGTGGCGGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAA CTGCGGACGTACTTCGAGTCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCCGTGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGCGGGCAACAATACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGGAGCTCGT ACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATACGCAACGAGTGGACGGAACTT  TGCGCAAGCT CGAGGAGCACCGCCAGCTTCACACCATTGCGATCGAGTACTTCG                                            ]
[+] EMBL CNS09BY9             [                               cgCATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGGACATGGTGGCGGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAACCTGCGGACGTACTTCGAGTCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCCGTGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGCGGGCAACAATACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGGAG TCGTAACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATACGCAACGAGTGGACGG ACTTGCTGCGCAA CTCCGAGGAGCACCGCCAGCTTCACACCATTGCGATCGAGTACTTCGAGCTGATCACCATGACCTGGGTGGATGGTCATAGGGGTTTCCTG]
[-] EMBL CNS094ZZ             [                                                                                                                                                                                           CGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCGGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGAACAGCATCCGGGAGTACTTCGGCACCAAGCAAA CGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCAAATCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGAGCGGACCCGCGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTGCGGGTTGCTTTCGAGGAGCGGGCAACAATACTGCAGGAACTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAACGGAGCTCGT ACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACACACAAGATACGCAACGAGTGGACGGTAC T CTGCGCAAGCT CGAGGAGCACCGCCAGCTc                                                                     ]
[-] EMBL CNS094SQ             [                                                                                                                                                                                                                                                                                                                                                               TGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGAGCGGACCCGCGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTGCGGGTTGCTTTCGAGGAGCGGGCAACAATACTGCAGGAACTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAACGGAGCTCGT ACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACACACAAGATACGCAACGAGTGGACGGTACT                                                                                                      ]


>consensus_6868#0 CACCAAGAACTGTTGGCCTACTGGCTGGGGAGACATTGGCCGTAGCATCCAAGCTGGAGG AGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTA TCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCC AGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGG ACATGGTGGCGGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGG CCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCC GGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGG AAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGT TGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCC GCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGT CGCAGACCGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACC GTGAGCTCGGGGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCC GTGGACAGTACGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGC GGGCAACAATACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGG AGCTCGTACGCCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATAC GCAACGAGTGGACGGTACTTCTGCGCAAGCTCGAGGAGCACCGCCAGCTTCACACCATTG CGATCGAGTACTTCGAGCTGATCACCATGACCTGGGTGGATGGTCATAGGGGTTTCCTG



consensusID : consensus_6868#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 726
fasta sequence
                              [GTCAGTAATGAGTGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAAATCATGGCTGCCAACATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGACTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCGGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGGGAGCTCGGGGAGGTGC]

[+] EMBL CNS094SP             [GTCAGTAATGAGTGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAAATCATGGCTGCCAACATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGACTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCGGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTG                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS094ZY             [            TGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAAATCATGGCTGCCAACATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTATCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAAACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGACACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCGGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGCGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCTTTCCTGCAGTGCCGGGACAGCATCCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCGGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAGAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGACACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACGAATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGGGAGCTCGGGGAGGTGC]


>consensus_6868#1 GTCAGTAATGAGTGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAA ATCATGGCTGCCAACATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTAT CCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGACTTTATCGGCCGCAAA CGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGAC ACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGCG GTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGGC GAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCATC CGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGCG GAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCAG AGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGAC ACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACGAAT CGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGGGAGCTCGGGG AGGTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6868#0      -------------------------------------------------CACCAAGAACT 11
consensus_6868#1      GTCAGTAATGAGTGGGAAAGCTGGAACAGTCGACGACGCACGGAGACAACACTGAAGCAA 60
                                                                       ***  *     

consensus_6868#0      GTTG-GCCTACTGGCTGGGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTA 70
consensus_6868#1      ATCATGGCTGCCAAC-ATGGAGACATTGGCCGTAGCATCCAAGCTGGAGGAGCAGCTGTA 119
                       *   * ** *   *   ******************************************

consensus_6868#0      TCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGAGTTTATCGGCCGCAA 130
consensus_6868#1      TCCGCTCTTCAGCACCGCCCTGGACAATCCAGCCGATCTGATCGACTTTATCGGCCGCAA 179
                      ********************************************* **************

consensus_6868#0      ACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGA 190
consensus_6868#1      ACGTACCCAGCTGCAGCAGGATGTGCAGGTCGCTGAAGCCGATCTGACCCAGCGCTTCGA 239
                      ************************************************************

consensus_6868#0      CACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACAGAACAGGACATGGTGGC 250
consensus_6868#1      CACGATCGCACAGCTGGAGGCGGCCGGTGCCGACCCCGGCACGGAACAGGACATGGTGGC 299
                      ****************************************** *****************

consensus_6868#0      GGTGAAGAACAACCTGAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGG 310
consensus_6868#1      GGTGAAGAACAACCTAAACTCAATCAAGACCAAGCTCCACACGCTCGGGGCCGACTTTGG 359
                      *************** ********************************************

consensus_6868#0      CGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCAT 370
consensus_6868#1      CGAGCTGTCGGACGCGACCGAACACTTCCTGCGCTCGATCCTGCAGTGCCGGGACAGCAT 419
                      ************************************************************

consensus_6868#0      CCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGC 430
consensus_6868#1      CCGGGAGTACTTCGGCACCAAGCAAACCGTGACCGGTCCGGGCAGTGTGGAAGCGATCGC 479
                      ************************************************************

consensus_6868#0      GGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCA 490
consensus_6868#1      GGAGGGCTACGAGCAGTTCAAGCAGGCCACGATGGAGTACTTCCGCGGGTTGCTGCAGCA 539
                      ************************************************************

consensus_6868#0      GAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCCGGAGCCCGCGAGCTCGA 550
consensus_6868#1      GAGCGAGCAGATCATCGAGCGGGTGAAGGCGCTGGAACCGCCAGGAGCCCGCGAGCTCGA 599
                      ****************************************** *****************

consensus_6868#0      CACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGACCGA 610
consensus_6868#1      CACGGACAAGATCATCACGCTGCTGGAGAATCTGCGGACGTACTTCGAGTCGCAGAC-GA 658
                      ********************************************************* **

consensus_6868#0      ATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGTGAGCTCGG 670
consensus_6868#1      ATCGGAGAACTGTGAGCTGAAGAAGCAGCACAGTGTGCTGGCGTTCGACCGGGAGCTCGG 718
                      *************************************************** ********

consensus_6868#0      GGAGGTGCGGGCTGCGATTCGGGCGGAGGCTGAGCGGTTGGACCGGACCCGTGGACAGTA 730
consensus_6868#1      GGAGGTGC---------------------------------------------------- 726
                      ********                                                    

consensus_6868#0      CGGGGAGAGTGTGGCCGAGGCTCAGTCCGTCCGGGTCGCTTTCGAGGAGCGGGCAACAAT 790
consensus_6868#1      ------------------------------------------------------------
                                                                                  

consensus_6868#0      ACTGCAGGATCTTGAGCGTCGTATCGATGCATTTATTAGCTCTGGAGCGGAGCTCGTACG 850
consensus_6868#1      ------------------------------------------------------------
                                                                                  

consensus_6868#0      CCAGTACCCCGAGACAAGCCCTTACATCGAGTCGGAAACGCACAAGATACGCAACGAGTG 910
consensus_6868#1      ------------------------------------------------------------
                                                                                  

consensus_6868#0      GACGGTACTTCTGCGCAAGCTCGAGGAGCACCGCCAGCTTCACACCATTGCGATCGAGTA 970
consensus_6868#1      ------------------------------------------------------------
                                                                                  

consensus_6868#0      CTTCGAGCTGATCACCATGACCTGGGTGGATGGTCATAGGGGTTTCCTG 1019
consensus_6868#1      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)