These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6885#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2088 fasta sequence [CCGCTCAAACAGAAAAAAAACTGTCTCTTTCGTCCTAAGTGTGTGCGCGCGAGCGTCATCCGCCTAAGTAGGAAAAGTGAATTGTTTGTTTCTCAGTGCGGTGCGGTGTGTGTGTGTGTGTTTAGTGCACGGAGGAATCCATTTTCCTGAAAGAGCCCCCCTTAGCACACACGCATTTCGTAAAGATCCTTTTTTTTTGCGCACAGCGCCTACTAAGAGAGAGAAAACGAGAAAAAAAAGCTCCGCACACTGGTACGAGCCCCCGGTTTCGAGAACTGCCATTTCAGTAAAGAAAAATTAATATTCGTGAAATATTCGTCCACTACGAAAGAAACGTGTTAACCGACGACGACGAAAAGTGTGTTAACCGAGTGTGAAAATCATTATTTGATGCGCCTTGAAAATAGTGCATTTTTACTAGTAAAAGCAAAAGCGTGCGAAAAAAAAAAGTCGAGTTTAAACACACCACGAGCCTCTCTGCCTGCGCCATATTGCC-ATTTTTTTTTGTCGCCGTAAATAGTGTGTGTTTGTGAGCAAATCGCGATTTGAAGTGTGGTGCGATTTTTTACATATTTGGAGCAATTTTTAATTGAGTGACGAGTGTTTTTATGCATCGCGGCTAAGTGAAAAAATCAGCAGCTTCATTTGTGTGAGAGTGCACGCGCGAAAGGATAAAGGAGAGAGAGAGAGTCCTTTCACCTCTTTTGCATATCGCGCGACCGTCGTGAGTGTGTTATCTCGATCGCTGTTCGCCTCTACGAGAGTAGTGTGTGCTTCGTTTCGATACGAGTGTGTGCGCAATCGCTAATATCCTGTTCCTGCGCGCGCTCCTGTGTGATACATATACGTGTGTGCGTTTGTGTGAAATTGGCAGCATCGGTAGAGGAGATCCATCCGCGGCAAAACGTGTTTTAGCAAGCAACCACCATGTCTACTGCGATAATGCACCACAGCACGTCACTGTACGACTTTGGAGAGTACCCACGAAAGAACCAAACCAACACTTCCCGAGGCAACACACAGGCGACCATTGGCAGTGGTGGTGTTGGCGCCGGTAACAACAACGTACACAACGGCGGTACCTCCAGCAGCAGCAGCAGCAACAACAGCCAACAGATGCTGCTGTCGCAAAGTTTCAGCGTGGCCGCTGCGCTCGCTGCCACCTCCAACAACAGCAACGGCAGCAACGGTGGAAATTTGCTGAGCGCTCAGCAATCGCTTAGCGGCAGCAACCATCACATCCAGCATCAGCAGCTCCAGTACCAGCAGCAGCAGTACTCTTACAATCTGCAGAAAACTGGCGGTGCCTCCCAGCACAAGCACCACGGTGGGCATCATGCCGCACTGCACCGTACCGCGTCGCAGCCGGCCGCCCGCCACATGGTGGAAAACATCCTGGAGATGTTCACGCTCAACATGGCGATGGAGGACGCGGCCCTAGCCGGGCTGACCGGGACCACCGCCGCAGCCGTCGCCGCCACGATCAGCTCGAGCAGCAGCAGCGCCAGCTCGATCAACAGCAACCACGGCAACAACGGTAGCCACAACCAGCAGCACGCCACTAGCAACACTTCCTCCTCCTCCGGTCACCGGAAGTTGGAACGAACGCAGTCCGAACCGCTGCCACAGCATGTAAATACCTCGAGATACAAAACCGAGCTCTGCCGACCGTACGAGGAGGCGGGAGAGTGCAAGTACGGCGACAAGTGCCAGTTCGCGCACGGCATGCAGGAGCTGCGCAATCTGCAGCGCCACCCGAAGTACAAGACGGAGCTGTGCCGCACGTTCCACAGCGTCGGCTTCTGTCCGTACGGGCCGCGCTGCCACTTTGTGCACAACGCGGAGGAGGCGCGCAACCACAACCGCAACGTGGCCGCCTACAACGCGCGGCTGGCAGCGGCAAATGCGGCTGCCGCCGCCGCCGCCGCCAACGGCAACTCATCCCAGTCAGCGCAGGGCGCGGCCAAGAGCAACCAAAACGGACCCAGTATGATCGCCAGTAACAACAATTCGTCGCAGCAGCAGCAGCACGGTCATCACCAGCAGCAGCAGCACAGTGCCCTAAAGTCACTGTCCGTCGCACAGCAG] [+] EMBL BM636681 [CCGCTCAAACAGAAAAAAAACTGTCTCTTTCGTCCTAAGTGTGTGCGCGCGAGCGTCATCCGCCTAAGTAGGAAAAGTGAATTGTTTGTTTCTCAGTGCGGTGCGGTGTGTGTGTGTGTGTTTAGTGCACGGAGGAATCCATTTTCCTGAAAGAGCCCCCCTTAGCACACACGCATTTCGTAAAGATCCTTTTTTTTTGCGCACAGCGCCTACTAAGAGAGAGAAAACGAGAAAAAAAAGCTCCGCACACTGGTACGAGCCCCCGGTTTCGAGAACTGCCATTTCAGTAAAGAAAAATTAATATTCGTGAAATATTCGTCCACTACGAAAGAAACGTGTTAACCGACGACGACGAAAAGTGTGTTAACCGAGTGTGAAAATCATTATTTGATGCGCCTTGAAAATAGTGCATTTTTACTAGTAAAAGCAAAAGCGTGCGAAAAAAAAAAGTCGAGTTTAAACACACCACGAGCCTCTCTGCCTGCGCCATATTGCCAATTTTTTTTTGTCGCCGTAAATAGTGTGTGTTTGTGAGCAAATCGCGATTTGAAGTGTGGTGCGATTTTTTACATATTTGGAGCAATTTTTAATTGAGTGA ] [+] EMBL BM644910 [ CCGCGAGCCTCTCTGCCTGCGCCATATTGCC ATTTTTTTTTGTCGCTGTAAATAGTGTGTGTTTGTGAGCAAATCGCGATTTGAAGTGTGGTGCGATTTTTTACATATTTGGAGCAATTTTTAATTGAGTGACGAGTGTTTTTATGCATCGCGGCTAAGTGAAAAAATCAGCAGCTTCATTTGTGTGAGAGTGCACGCGCGAAAGGATAAAGGAGAGAGAGAGAGTCCTTTCACCTCTTTTGCATATCGCGCGACCGTCGTGAGTGTGTTATCTCGATCGCTGTTCGCCTCTACGAGAGTAGTGTGTGCTTCGTTTCGATACGAGTGTGTGCGCAATCGCTAATATCCTGTTCCTGCGCGCGCTCCTGTGTGATACATATACGTGTGTGCGTTTGTGTGAAATTGGCAGCATCGGTAGAGGAGATCCATCCGCGGCAAAACGTGTTTTAGCAAGCAACCACCATGTCTACTGCGATAATGCACCACAGCACGTCACTGTACGACTTTGGAGAGTACCCACGAAAGAACCAAACCAACACTTCCCGAGGCAACACACAGGCGACCATTGGCAGTGGTGGTGTTGGCGCCGGTAACAACAACGTACACAACGGCGGTACCTCCAGCAGCAGCAGCAGCAACAACAGCCAACAGA ] [+] EMBL BM599623 [ ccgCTCGATCGCTGTTCGCCTCTACGAGAGTAGTGTGTGCTTCGTTTCGATACGAGTGTGTGCGCAATCGCTAATATCCTGTTCCTGCGCGCGCTCCTGTGTGATACATATACGTGTGTGCGTTTGTGTGAAATTGGCAGCATCGGTAGAGGAGATCCATCCGCGGCAAAACGTGTTTTAGCAAGCAACCACCATGTCTACTGCGATAATGCACCACAGCACGTCACTGTACGACTTTGGAGAGTACCCACGAAAGAACCAAACCAACACTTCCCGAGGCAACACACAGGCGACCATTGGCAGTGGTGGTGTTGGCGCCGGTAACAACAACGTACACAACGGCGGTACCTCCAGCAGCAGCAGCAGCAACAACAGCCAACAGATGCTGCTGTCGCAAAGTTTCAGCGTGGCCGCTGCGCTCGCTGCCACCTCCAACAACAGCAACGGCAGCAACGGTGGAAATTTGCTGAGCGCTCAGCAATCGCTTAGCGGCAGCAACCATCACATCCAGCATCAGCAGCTCCAGTACCAGCAGCAGCAGTACTCTTACAATCTGCAGAAAACTGGCGGTGCCTCCCAGCACAAGCACCACGGTGGGCATCATGCCGCACTGCACCGTACCGCGTCGCAGCCGGCCGCCCGCCACATGGTGGAAAA ] [+] EMBL AGA285554 [ ACAAGCACCACGGTGGGCATCATGCCGCACTGCACCGTACCGCGTCGCAGCCGGCCGCCCGCCACATGGTGGAAAACATCCTGGAGATGTTCACGCTCAACATGGCGATGGAGGACGCGGCCCTAGCCGGGCTGACCGGGACCACCGCCGCAGCCGTCGCCGCCACGATCAGCTCGAGCAGCAGCAGCGCCAGCTCGATCAACAGCAACCACGGCAACAACGGTAGCCACAACCAGCAGCACGCCACTAGCAACACTTCCTCCTCCTCCGGTCACCGGAAGTTGGAACGAACGCAGTCCGAACCGCTGCCACAGCATGTAAATACCTCGAGATACAAAACCGAGC ] [+] EMBL BM583393 [ ccgCGCAGTCCGAACCGCTGCCACAGCAAGTAAATACCTCGAGATACAAAACCGAGCTCTGCCGACCGTACGAGGAGGCGGGAGAGTGCAAGTACGGCGACAAGTGCCAGTTCGCGCACGGCATGCAGGAGCTGCGCAATCTGCAGCGCCACCCGAAGTACAAGACGGAGCTGTGCCGCACGTTCCACAGCGTCGGCTTCTGTCCGTACGGGCCGCGCTGCCACTTTGTGCACAACGCGGAGGAGGCGCGCAACCACAACCGCAACGTGGCCGCCTACAACGCGCGGCTGGCAGCGGCAAATGCGGCTGCCGCCGCCGCCGCCGCCAACGGCAACTCATCCCAGTCAGCGCAGGGCGCGGCCAAGAGCAACCAAAACGGACCCAGTATGATCGCCAGTAACAACAATTCGTCGCAGCAGCAGCAGCACGGTCATCACCAGCAGCAGCAGCACAGTGCCCTAAAGTCACTGTCCGTCGCACAG ] [-] EMBL AGA284254 [ TGTGCACAACGCGGAGGAGGCGCGCAACCACAACCGCAACGTGGCCGCCTACCACGCGCGGCTGGCAGCGGCAAATGCGGCTGCCGCCGCCGCCGCCGCCAACGGCAACTCATCCCAGTCAGCGCAGGGCGCGGCCAAGAGCAACCAAAACGGTCCCAGTATGATCGCCAGTAACAACAATTCGTC GCAGCAGCAGCACGGTCATCACCAGCAGCAGCAGCACAGTGCCCTAAAGTCACTGTCCGTCGCACAGCAG] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||