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Anopheles gambiae
cluster # 6906 cluster # 6906       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6906#0 length = 785 sequences # 2  
consensus_6906#1 length = 699 sequences # 1  
consensus_6906#2 length = 681 sequences # 1  
consensus_6906#3 length = 669 sequences # 1  
consensus_6906#4 length = 606 sequences # 1  

consensusID : consensus_6906#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 785
fasta sequence
                              [AAGTTCCCATCGTGAAAATCTCTTGCACTTCCCGAAAGTATCTGCAGAAGACAAAGGAGGATTATGATGATAATGACGGTTGCATTAACATAGAGAAGAATTAAGGAGCGGCAGACAGCAAGCGCGTGCGCGCGCCCAAAACCGTGCAACACGTGCTGCGTTTAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAAAGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGTGTAAGAAGCGGCACATGTCCTCTCAAAGCGGTAGAGTTGTGCACAATGCGGCGATTTATGTTTTGAGTGTGTGTGTGTGTGTAAGTTAAGCAATATCCGTTGTGCATTGTACTTGTTTTTTTAGAGCTACATTAAGAGAATTATTGTAATGGTGGGGTAGATGGTAGTCGAGCGACGAAAAGAGTCG-TCCCTTAGGGAGAACTATTTCTC-GGCCCTTATTCTTAAACAAATGTTGAATTGAAGGTAGAAGAGAGGTATGCTTGTATTTGAGTGTGGTGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTATATACACACTTACTATACGCTACAGTGTGTACGTTTTGTTTCCGGTGCCTTAAAAAAACCATACAAACACAGCTCTTTAGAATTAGCGCCTAAGTTATATGAGGGAAAAAGAAACGCCCGAGAGGAGAGAGAGAGTTCAGCAGAGAAGAAAGCCAACACACAAACATGTTCCTCGGAGGACGAAAATAAATCATATTTACATCGCCGGGTCTCCCG]

[+] EMBL CNS09QFU             [AAGTTCCCATCGTGAAAATCTCTTGCACTTCCCGAAAGTATCTGCAGAAGACAAAGGAGGATTATGATGATAATGACGGTTGCATTAACATAGAGAAGAATTAAGGAGCGGCAGACAGCAAGCGCGTGCGCGCGCCCAAAACCGTGCAACACGTGCTGCGTTTAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAAAGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGTGTAAGAAGCGGCACATGTCCTCTCAAAGCGGTAGAGTTGTGCACAATGCGGCGATTTATGTTTTGAGTGTGTGTGTGTGTGTAAGTTAAGCAATATCCGTTGTGCATTGTACTTGTTTTTTTAGAGCTACATTAAGAGAATTATTGTAATGGTGGGGTAGATGGTAGTCGAGCGACGAAAAGAGTCG TCCCTTAGGGAGAACTATTTCTC GGCCCTTATTCTTAAACAAATGTTGAATTGAAGGTAGAAGAGAGGTATGCTTGTATTTGAGTGTGGTGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTATATACACACTTACTATACGCTACAGTGTGTACGTTTTGTTTCCGGTGCCTTAAAAAAACCATACAAACACAGCTCTTTAGAATTAGCGCCTAAGTTATATGAGGGAAAAAGAAACGCCCGAGAGGAGAGAGAGAGTTCAGCAGAGAAGAAAGCCAACACACAAACATGTTCCTCGGAGGACGAAA                               ]
[-] EMBL CNS09QFV             [                                                                                                                                                                                                                                                                                                        GCACAATGCGGCGATTTATGTTTTGAGTGTGTGTGTGTGTGTAAGTTAAGCAATATCCGTTGTGCATTGTACTTGTTTTTTTAGAGCTACATTAAGAG ATTATTGTAATGGTGGGGTAGATGGTAGTCGAGCGACGAAAAGAGTCGATCCCTTAGGGAGAACTATTTCTCGGGCCCTTATTCTTAAACAAATGTTGAATTGAAGGTAGAAAAGAGGTATGCTTGTATTTGAGTGTGGTGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTATAAACAAACTTACTATACGCTACAGTGTGTACGTTTTTTTTCCGGTGCCTTAAAAAAACCATACAAAAACAGCTCTTTAGAATTAGCGCCTAAGTTATTTGAGGGAAAAAGAAACGCCCGAGAGGAGAGAGAGAGTACAGCAGAGAAGAAAGCCCACACACAAACATGTTCCTCGGAGGACGAAAATAAATCATATTTACATCGCCGGGTCTCCCG]


>consensus_6906#0 AAGTTCCCATCGTGAAAATCTCTTGCACTTCCCGAAAGTATCTGCAGAAGACAAAGGAGG ATTATGATGATAATGACGGTTGCATTAACATAGAGAAGAATTAAGGAGCGGCAGACAGCA AGCGCGTGCGCGCGCCCAAAACCGTGCAACACGTGCTGCGTTTAATACCTCGTGCTTAAA AAGTGGCCTTTACTTAAAGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAG TGTGGTAGTTACCGGTGTAAGAAGCGGCACATGTCCTCTCAAAGCGGTAGAGTTGTGCAC AATGCGGCGATTTATGTTTTGAGTGTGTGTGTGTGTGTAAGTTAAGCAATATCCGTTGTG CATTGTACTTGTTTTTTTAGAGCTACATTAAGAGAATTATTGTAATGGTGGGGTAGATGG TAGTCGAGCGACGAAAAGAGTCGTCCCTTAGGGAGAACTATTTCTCGGCCCTTATTCTTA AACAAATGTTGAATTGAAGGTAGAAGAGAGGTATGCTTGTATTTGAGTGTGGTGCGTAGA AAACGGCATTGGTACTAGAATGGTGGTTATATACACACTTACTATACGCTACAGTGTGTA CGTTTTGTTTCCGGTGCCTTAAAAAAACCATACAAACACAGCTCTTTAGAATTAGCGCCT AAGTTATATGAGGGAAAAAGAAACGCCCGAGAGGAGAGAGAGAGTTCAGCAGAGAAGAAA GCCAACACACAAACATGTTCCTCGGAGGACGAAAATAAATCATATTTACATCGCCGGGTC TCCCG



consensusID : consensus_6906#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 699
fasta sequence
                              [TCGCCGAGGTTANGTCGTTGCGTTGAGTTCGGCACGCCGTACGAGCTGTTAACCACCGAAGGAGGCCCCAAAGTGTTCTACGGCATGGTGAAGCAGACGGGCAAGAGCACCTTCAACACGCTGCTTAAGATCGCCGAGGAGTCTCACAATCAGAAACTGAAACCGATTAAGGAGGCTGAAGCAACAGAATAGGTTACACAAAAGCAACAGCAGCAGCAGTACCAGTATAGTTTGTAAGCATTTTGTACAAGTTCCCATCGTGAAAATCTCTTGCACTTCCCGAAAGTATCTGCAACAGACAAAGGAGGATTATGACTGATAAGGACGGTTGCACTTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCCAAAAGCGGTGCAACACCGTGTTGCCGCTCTCTAACTAACCCTCGCCTGGCCTTAACACACACGNTGGCCCCTTCTACCCTTACACACGNTACACCTACAGCTANACTCACTNTCTCGACACCACACACCTTCCCTACTCTCCTTCGCTCCCCCTTCTACGCCCTGGTTGCGCTTAAGTCTCACCCGGGGTGCTTCACACGACACGCCGCGTCCACCCCACCGCGCTCCCTTCCCTCCGACACCACGCCCGCGCGCTCACGCGCAACTTTCGGTTGGCCCCACTCTATCATCTTGGCCCGGCGNCCTGCACTCT]

[+] EMBL AL931941             [TCGCCGAGGTTANGTCGTTGCGTTGAGTTCGGCACGCCGTACGAGCTGTTAACCACCGAAGGAGGCCCCAAAGTGTTCTACGGCATGGTGAAGCAGACGGGCAAGAGCACCTTCAACACGCTGCTTAAGATCGCCGAGGAGTCTCACAATCAGAAACTGAAACCGATTAAGGAGGCTGAAGCAACAGAATAGGTTACACAAAAGCAACAGCAGCAGCAGTACCAGTATAGTTTGTAAGCATTTTGTACAAGTTCCCATCGTGAAAATCTCTTGCACTTCCCGAAAGTATCTGCAACAGACAAAGGAGGATTATGACTGATAAGGACGGTTGCACTTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCCAAAAGCGGTGCAACACCGTGTTGCCGCTCTCTAACTAACCCTCGCCTGGCCTTAACACACACGNTGGCCCCTTCTACCCTTACACACGNTACACCTACAGCTANACTCACTNTCTCGACACCACACACCTTCCCTACTCTCCTTCGCTCCCCCTTCTACGCCCTGGTTGCGCTTAAGTCTCACCCGGGGTGCTTCACACGACACGCCGCGTCCACCCCACCGCGCTCCCTTCCCTCCGACACCACGCCCGCGCGCTCACGCGCAACTTTCGGTTGGCCCCACTCTATCATCTTGGCCCGGCGNCCTGCACTCT]


>consensus_6906#1 TCGCCGAGGTTANGTCGTTGCGTTGAGTTCGGCACGCCGTACGAGCTGTTAACCACCGAA GGAGGCCCCAAAGTGTTCTACGGCATGGTGAAGCAGACGGGCAAGAGCACCTTCAACACG CTGCTTAAGATCGCCGAGGAGTCTCACAATCAGAAACTGAAACCGATTAAGGAGGCTGAA GCAACAGAATAGGTTACACAAAAGCAACAGCAGCAGCAGTACCAGTATAGTTTGTAAGCA TTTTGTACAAGTTCCCATCGTGAAAATCTCTTGCACTTCCCGAAAGTATCTGCAACAGAC AAAGGAGGATTATGACTGATAAGGACGGTTGCACTTAACATAGTAATGAATTAAGGAGCG GCAGACAGCAAGCGCGCGCGCGCGCCAAAAGCGGTGCAACACCGTGTTGCCGCTCTCTAA CTAACCCTCGCCTGGCCTTAACACACACGNTGGCCCCTTCTACCCTTACACACGNTACAC CTACAGCTANACTCACTNTCTCGACACCACACACCTTCCCTACTCTCCTTCGCTCCCCCT TCTACGCCCTGGTTGCGCTTAAGTCTCACCCGGGGTGCTTCACACGACACGCCGCGTCCA CCCCACCGCGCTCCCTTCCCTCCGACACCACGCCCGCGCGCTCACGCGCAACTTTCGGTT GGCCCCACTCTATCATCTTGGCCCGGCGNCCTGCACTCT



consensusID : consensus_6906#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 681
fasta sequence
                              [CCGCTACAACGGTGGTTCGATTCTGATCGACACGCGCGATACGAGCCAGATGGGGCTGCACGATTTGCGGGCGAAGCTGTCGATCATCCCGCAGGAGCCGGTGTTGTTCTCGGGCACGCTGCGCTACAATCTCGACCCGTTCGACGAGTACCCGGACGAGAAGCTGTGGCGTGCGCTGAAGGAGGTGAAGCTGGAGGACGCGGTGAACGAGCTGCCGTCCGGGCTGTCGTCGAAGATTAACGAGGGCGGTAGCAACTTTAGCGTGGGCCAGCGGCAGCTCGTCTGCCTTGCCCGGGCGATACTGCGCGAGAACAAGATACTGGTGATGGACGAGGCGACGGCCAACGTCGACCCGCAGACGGACAAGCTGATCCAGCAGACGATACGGGAGAAATTCAACGACTGTACAGTATTGACGATTGCGCACCGTTTGAACACCGTCATGGATTCGGACAAGGTGCTTGTAATGGACGCAGGTCGTTGCGTTGAGTTCGGCACGCCGTACGAGCTGTTAACCACCGAAGGAGGCCCCAAAGTGTTCTACGGCATGGTGAAGCAGACGGGCAAGAGCACCTTCAACACGCTGCTTAAGATCGCCGAGGAGTCTCACAATCAGAAACTGAAACCGATAAAGGAGGCTGAAGCAACAGAATAGATTACACAGCAGTAGCAGCAGTACCA]

[+] EMBL BM595910             [CCGCTACAACGGTGGTTCGATTCTGATCGACACGCGCGATACGAGCCAGATGGGGCTGCACGATTTGCGGGCGAAGCTGTCGATCATCCCGCAGGAGCCGGTGTTGTTCTCGGGCACGCTGCGCTACAATCTCGACCCGTTCGACGAGTACCCGGACGAGAAGCTGTGGCGTGCGCTGAAGGAGGTGAAGCTGGAGGACGCGGTGAACGAGCTGCCGTCCGGGCTGTCGTCGAAGATTAACGAGGGCGGTAGCAACTTTAGCGTGGGCCAGCGGCAGCTCGTCTGCCTTGCCCGGGCGATACTGCGCGAGAACAAGATACTGGTGATGGACGAGGCGACGGCCAACGTCGACCCGCAGACGGACAAGCTGATCCAGCAGACGATACGGGAGAAATTCAACGACTGTACAGTATTGACGATTGCGCACCGTTTGAACACCGTCATGGATTCGGACAAGGTGCTTGTAATGGACGCAGGTCGTTGCGTTGAGTTCGGCACGCCGTACGAGCTGTTAACCACCGAAGGAGGCCCCAAAGTGTTCTACGGCATGGTGAAGCAGACGGGCAAGAGCACCTTCAACACGCTGCTTAAGATCGCCGAGGAGTCTCACAATCAGAAACTGAAACCGATAAAGGAGGCTGAAGCAACAGAATAGATTACACAGCAGTAGCAGCAGTACCA]


>consensus_6906#2 CCGCTACAACGGTGGTTCGATTCTGATCGACACGCGCGATACGAGCCAGATGGGGCTGCA CGATTTGCGGGCGAAGCTGTCGATCATCCCGCAGGAGCCGGTGTTGTTCTCGGGCACGCT GCGCTACAATCTCGACCCGTTCGACGAGTACCCGGACGAGAAGCTGTGGCGTGCGCTGAA GGAGGTGAAGCTGGAGGACGCGGTGAACGAGCTGCCGTCCGGGCTGTCGTCGAAGATTAA CGAGGGCGGTAGCAACTTTAGCGTGGGCCAGCGGCAGCTCGTCTGCCTTGCCCGGGCGAT ACTGCGCGAGAACAAGATACTGGTGATGGACGAGGCGACGGCCAACGTCGACCCGCAGAC GGACAAGCTGATCCAGCAGACGATACGGGAGAAATTCAACGACTGTACAGTATTGACGAT TGCGCACCGTTTGAACACCGTCATGGATTCGGACAAGGTGCTTGTAATGGACGCAGGTCG TTGCGTTGAGTTCGGCACGCCGTACGAGCTGTTAACCACCGAAGGAGGCCCCAAAGTGTT CTACGGCATGGTGAAGCAGACGGGCAAGAGCACCTTCAACACGCTGCTTAAGATCGCCGA GGAGTCTCACAATCAGAAACTGAAACCGATAAAGGAGGCTGAAGCAACAGAATAGATTAC ACAGCAGTAGCAGCAGTACCA



consensusID : consensus_6906#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence
                              [AGATCGCCAGAGGTGAAAATCTCTTGGCACTTCCCGAAAGTATCTGCAACAGATAAAGGAGGATTATGATGATAAGGACGGTTGCATTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCCAAAGCGGTGCAACACGTGTTGCGTTTAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAAACGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGTGTAAGAAGCGGCACACGTCCTCTCAAAGCGGTAGGATTGTGCACAATGCGGTGATTTATGTTTTGAGTGTGTGTGTGTGTGTATCTGTGTAAGTTAAGCAATATACGTTGTGCATTGTACTTGTTTTTTAGAGCTACAGTAAGAGAAATATTGTAATGGGCATGGTACGGATGGTCGATACGGAAAGAGTCATCCCTTAGGGAGAGCTTCATTCTCGGCCTTATTCTTAAAAAAATGTTGAATTGAAAGTANAAGAGAGGTCTGCTTGTATTTGAACTGTGGTGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTACAATACATACTTACTATACCGCTACAGTGTGTACAGTTACAGTTTCCGGTGCCTTAACAAACCCATACAAACACACAGCTCTTTAGAATTAG]

[+] EMBL AL696353             [AGATCGCCAGAGGTGAAAATCTCTTGGCACTTCCCGAAAGTATCTGCAACAGATAAAGGAGGATTATGATGATAAGGACGGTTGCATTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCCAAAGCGGTGCAACACGTGTTGCGTTTAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAAACGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGTGTAAGAAGCGGCACACGTCCTCTCAAAGCGGTAGGATTGTGCACAATGCGGTGATTTATGTTTTGAGTGTGTGTGTGTGTGTATCTGTGTAAGTTAAGCAATATACGTTGTGCATTGTACTTGTTTTTTAGAGCTACAGTAAGAGAAATATTGTAATGGGCATGGTACGGATGGTCGATACGGAAAGAGTCATCCCTTAGGGAGAGCTTCATTCTCGGCCTTATTCTTAAAAAAATGTTGAATTGAAAGTANAAGAGAGGTCTGCTTGTATTTGAACTGTGGTGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTACAATACATACTTACTATACCGCTACAGTGTGTACAGTTACAGTTTCCGGTGCCTTAACAAACCCATACAAACACACAGCTCTTTAGAATTAG]


>consensus_6906#3 AGATCGCCAGAGGTGAAAATCTCTTGGCACTTCCCGAAAGTATCTGCAACAGATAAAGGA GGATTATGATGATAAGGACGGTTGCATTAACATAGTAATGAATTAAGGAGCGGCAGACAG CAAGCGCGCGCGCGCGCCAAAGCGGTGCAACACGTGTTGCGTTTAATACCTCGTGCTTAA AAAGTGGCCTTTACTTAAACGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTT AGTGTGGTAGTTACCGGTGTAAGAAGCGGCACACGTCCTCTCAAAGCGGTAGGATTGTGC ACAATGCGGTGATTTATGTTTTGAGTGTGTGTGTGTGTGTATCTGTGTAAGTTAAGCAAT ATACGTTGTGCATTGTACTTGTTTTTTAGAGCTACAGTAAGAGAAATATTGTAATGGGCA TGGTACGGATGGTCGATACGGAAAGAGTCATCCCTTAGGGAGAGCTTCATTCTCGGCCTT ATTCTTAAAAAAATGTTGAATTGAAAGTANAAGAGAGGTCTGCTTGTATTTGAACTGTGG TGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTACAATACATACTTACTATACCGCT ACAGTGTGTACAGTTACAGTTTCCGGTGCCTTAACAAACCCATACAAACACACAGCTCTT TAGAATTAG



consensusID : consensus_6906#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 606
fasta sequence
                              [CCGCGGACGCGTGGGCTCTTGCACTTCCCGAAAGTATCTGCAACAGACAAAGGAGGATTATGATGATAAGGACGGTTGCATTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCCAAAGCGGTGCAACACGTGTTGCGTTTAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAAAGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGTGTAAGAAGCGGCACACGTCCTCTCAAAGCGGTAGGATTGTGCACAATGCGGTGATTTATGTTTTGAGTGTGTGTGTGTGTGTATCTGTGTAAGTTAAGCAATATACGTTGTGCATTGTACTTGTTTTTTAGAGCTACAGTAAGAGAAATATTGTAATGGGCATGGTAGGATGGTCGATACGGAAAGAGTCATCCCTTAGGGAGAGCTTTTTCTCGGCCCTTATTCTTAAAAAAATGTTGAATTGAAAGTAGAAGAGAGGTCTGCTTGTATTTGAATGTGGTGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTACAATACAAACATGTTCCTCGGAGGACGAAAATAAATCA]

[+] EMBL BM604540             [CCGCGGACGCGTGGGCTCTTGCACTTCCCGAAAGTATCTGCAACAGACAAAGGAGGATTATGATGATAAGGACGGTTGCATTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCCAAAGCGGTGCAACACGTGTTGCGTTTAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAAAGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGTGTAAGAAGCGGCACACGTCCTCTCAAAGCGGTAGGATTGTGCACAATGCGGTGATTTATGTTTTGAGTGTGTGTGTGTGTGTATCTGTGTAAGTTAAGCAATATACGTTGTGCATTGTACTTGTTTTTTAGAGCTACAGTAAGAGAAATATTGTAATGGGCATGGTAGGATGGTCGATACGGAAAGAGTCATCCCTTAGGGAGAGCTTTTTCTCGGCCCTTATTCTTAAAAAAATGTTGAATTGAAAGTAGAAGAGAGGTCTGCTTGTATTTGAATGTGGTGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTACAATACAAACATGTTCCTCGGAGGACGAAAATAAATCA]


>consensus_6906#4 CCGCGGACGCGTGGGCTCTTGCACTTCCCGAAAGTATCTGCAACAGACAAAGGAGGATTA TGATGATAAGGACGGTTGCATTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCG CGCGCGCGCGCCAAAGCGGTGCAACACGTGTTGCGTTTAATACCTCGTGCTTAAAAAGTG GCCTTTACTTAAAGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGG TAGTTACCGGTGTAAGAAGCGGCACACGTCCTCTCAAAGCGGTAGGATTGTGCACAATGC GGTGATTTATGTTTTGAGTGTGTGTGTGTGTGTATCTGTGTAAGTTAAGCAATATACGTT GTGCATTGTACTTGTTTTTTAGAGCTACAGTAAGAGAAATATTGTAATGGGCATGGTAGG ATGGTCGATACGGAAAGAGTCATCCCTTAGGGAGAGCTTTTTCTCGGCCCTTATTCTTAA AAAAATGTTGAATTGAAAGTAGAAGAGAGGTCTGCTTGTATTTGAATGTGGTGCGTAGAA AACGGCATTGGTACTAGAATGGTGGTTACAATACAAACATGTTCCTCGGAGGACGAAAAT AAATCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6906#3      ---------------------------------AGATCGCCAGAGGTGAAAATCTCTTGG 27
consensus_6906#4      -------------------------------------CCGCGGACGCGTGGG-CTCTTG- 21
consensus_6906#0      ----------------------------------AAGTTCCCATCGTGAAAATCTCTTG- 25
consensus_6906#1      TCGCCGAGGTTANGTCGTTGCGTTGAGTTCGGCACGCCGTACGAGCTGTTAACCACCGAA 60
consensus_6906#2      ------CCGCTACAACGGTG-GTTCGATTCTGATCGACACGCGCGATACGAG---CCAGA 50
                                                                             *    

consensus_6906#3      CACTTCCCGAAAGTAT-CTGCAACA-GATAAAGGAGGATTATGATGATAAGGACG----G 81
consensus_6906#4      CACTTCCCGAAAGTAT-CTGCAACA-GACAAAGGAGGATTATGATGATAAGGACG----G 75
consensus_6906#0      CACTTCCCGAAAGTAT-CTGCAGAA-GACAAAGGAGGATTATGATGATAATGACG----G 79
consensus_6906#1      GGAGGCCCCAAAGTGTTCTACGGCATGGTGAAGCAGACGGGCAAGAGCACCTTCAACACG 120
consensus_6906#2      TGGGGCTGCACGATTT------GCG-GGCGAAGCTGTCGATCAT-----CCCGCAGGA-G 97
                           *   *   * *          *   ***  *                 *     *

consensus_6906#3      TTGCATTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCC-AA 140
consensus_6906#4      TTGCATTAACATAGTAATGAATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCC-AA 134
consensus_6906#0      TTGCATTAACATAGAGAAGAATTAAGGAGCGGCAGACAGCAAGCGCGTGCGCGCGCCCAA 139
consensus_6906#1      CTGCTTAAGATCGCCGAGGAGTCTCACAATCAGAAACTGAAACCGATTAAGGAGGCT-GA 179
consensus_6906#2      CCGGTGTTGTTCTCGGGCACGCTGCGCTAC---AATCTCGACCCGTTCGACGAGTACCCG 154
                        *                              *  *   *  **               

consensus_6906#3      AGCGGTGCAACACGTGTTGCGTT--TAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAA 198
consensus_6906#4      AGCGGTGCAACACGTGTTGCGTT--TAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAA 192
consensus_6906#0      AACCGTGCAACACGTGCTGCGTT--TAATACCTCGTGCTTAAAAAGTGGCCTTTACTTAA 197
consensus_6906#1      AGCAACAGAATAGGTTACACAAAAGCAACAGCAGCAGCAGTACCAGTATAGTTTGTAAGC 239
consensus_6906#2      GACGAGAAGCTGTGGCGTGCGCT-GAAGGAGGTGAAGCTGGAGGA-CGCGGTGAACGAGC 212
                        *          *     *      *  *      **   *  *      *        

consensus_6906#3      ACGTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGT 258
consensus_6906#4      A-GTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGT 251
consensus_6906#0      A-GTAATAAGTAATCATTTCGAACAAATTCTATTCTGTCCTTAGTGTGGTAGTTACCGGT 256
consensus_6906#1      ATTTTGTACAAGTTCCCATCGTGAAAATCTCTTGCACTTCCCGAA--AGTATCTGCAACA 297
consensus_6906#2      T-GCCGTCCGGGCTGTCGTCG--AAGAT---TAACGAGGGCGGTAGCAACTTTAGCGTGG 266
                            *      *    ***   * **      *                    *    

consensus_6906#3      GTAAGAAGCGGCACAC--GTCCTCTCAAAGCGGT--AGGATT-GTGCACAATGC-GGTGA 312
consensus_6906#4      GTAAGAAGCGGCACAC--GTCCTCTCAAAGCGGT--AGGATT-GTGCACAATGC-GGTGA 305
consensus_6906#0      GTAAGAAGCGGCACAT--GTCCTCTCAAAGCGGT--AGAGTT-GTGCACAATGC-GGCGA 310
consensus_6906#1      GACAAAGGAGGATTAT--GACTGATAAGGACGGT--TGCACT-TAACATAGTA---ATGA 349
consensus_6906#2      GCCAGCGGCAGCTCGTCTGCCTTGCCCGGGCGATACTGCGCGAGAACAAGATACTGGTGA 326
                      *  *   *  *       * *         ** *   *        **   *      **

consensus_6906#3      TTTATGTTTTGAGTGTGTGTGTGTGTGTATCTGTGT---AAGTTAAGCAATA--TA-CGT 366
consensus_6906#4      TTTATGTTTTGAGTGTGTGTGTGTGTGTATCTGTGT---AAGTTAAGCAATA--TA-CGT 359
consensus_6906#0      TTTATGTTTTGAGTGTGTGTGTGT--------GTGT---AAGTTAAGCAATA--TC-CGT 356
consensus_6906#1      ATTAAGGAGCGGCAGACAGCAAGCGCGCGCGCGCGCCAAAAGCGGTGCAACA--CCGTGT 407
consensus_6906#2      TGGACGAGGCGACGGCCAACGTCGACCCGCAGACGGACAAGCTGATCCAGCAGACGATAC 386
                         * *    *   *                   *    *       **  *        

consensus_6906#3      TGT-GCATTGTACTTGTTTTTT-AGAGCTACAGTAAGAGAAATATTG--TAATGGGCATG 422
consensus_6906#4      TGT-GCATTGTACTTGTTTTTT-AGAGCTACAGTAAGAGAAATATTG--TAATGGGCATG 415
consensus_6906#0      TGT-GCATTGTACTTGTTTTTTTAGAGCTACATTAAGAGAATTATTG--TAATGGTGGGG 413
consensus_6906#1      TGCCGCTCTCTAACTAACCCTC--GCCTGGCCTTAACACACACGNTGGCCCCTTCTACCC 465
consensus_6906#2      GGGAGAAATTCAACGACTGTACAGTATTGACGATTGCGCACCGTTTGAACACCGTCATGG 446
                       *  *   *  *                  *  *     *     **             

consensus_6906#3      GTACGGATGGTCGAT--ACGGAAAGAGTCATCCCTTAGGGAGAGCTTCATTCTCGGCCTT 480
consensus_6906#4      GTA-GGATGGTCGAT--ACGGAAAGAGTCATCCCTTAGGGAGAGCTTTTTCTCGGCCCTT 472
consensus_6906#0      TAGATGGTAGTCGAGCGACGAAAAGAGTCGTCCCTTAGGGAGAACTATTTCTCGGCCCTT 473
consensus_6906#1      TTACACACGNTACACCTACAGCTANACTCACTNTCTCGACACCACACACCTTCCCTACTC 525
consensus_6906#2      ATTCGGACAAGGTGCTTGTAA-TGGACGCAGGTCGTTGCGTTGAG-----TTCGGCACGC 500
                                               *  *      * *                   *  

consensus_6906#3      ATTCTTAAAAAAATGTTGAATTGAAAGTANAAGAGAGGTCTGCTTGTATTTGAACTGTGG 540
consensus_6906#4      ATTCTTAAAAAAATGTTGAATTGAAAGTAGAAGAGAGGTCTGCTTGTATTTGAA-TGTGG 531
consensus_6906#0      ATTCTTAAACAAATGTTGAATTGAAGGTAGAAGAGAGGTATGCTTGTATTTGAG-TGTGG 532
consensus_6906#1      TCCTTCGCTCCCCCTTCTACGCCCTGGTTGCGCTTAAGTCT-----CACCCGGGGTGCTT 580
consensus_6906#2      -CGTACGAGCTGTTAACCAC-CGAAGGAGGCCCCAAAGTGTTCTACGGCATGGTGAAGCA 558
                                        *       *        * ** *          *        

consensus_6906#3      TGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTACAATACAT-ACTTACTATACCGC 599
consensus_6906#4      TGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTACAATACAA-ACATGTTCCTCGGA 590
consensus_6906#0      TGCGTAGAAAACGGCATTGGTACTAGAATGGTGGTTATA-TACAC-ACTTACTATAC-GC 589
consensus_6906#1      CACACGACACGCCGCGTCCACCCCACCGCGCTCCCTTCCCTCCGA-CACCACGCCCGCGC 639
consensus_6906#2      GACGGGCAAGAGCACCTTCAACACGCTGCTTAAGATCGCCGAGGAGTCTCACAATCAGAA 618
                        *     *     * *                  *                        

consensus_6906#3      TACAGTGTGTACAGTTACAGTTTCCGGTGCCTTAACAAACCCATACAAACACACAGCTCT 659
consensus_6906#4      GGACGAAAATA-AATCA------------------------------------------- 606
consensus_6906#0      TACAGTGTGTACGTTTT--GTTTCCGGTGCCTTAAAAAAACCATACAAACAC--AGCTCT 645
consensus_6906#1      GCTCACGCGCA-ACTTTCGGTTGGCCCCACTCTATCAT-CTTGGCCCGGCGNCCTGCACT 697
consensus_6906#2      ACTGAAACCGATAAAGGAGGCTGAAGCAACAGAATAGATTACACAGCAGTAG-CAGCAGT 677
                                *                                                 

consensus_6906#3      TTAGAATTAG-------------------------------------------------- 669
consensus_6906#4      ------------------------------------------------------------
consensus_6906#0      TTAGAATTAGCGCCTAAGTTATATGAGGGAAAAAGAAACGCCCGAGAGGAGAGAGAGAGT 705
consensus_6906#1      CT---------------------------------------------------------- 699
consensus_6906#2      ACCA-------------------------------------------------------- 681
                                                                                  

consensus_6906#3      ------------------------------------------------------------
consensus_6906#4      ------------------------------------------------------------
consensus_6906#0      TCAGCAGAGAAGAAAGCCAACACACAAACATGTTCCTCGGAGGACGAAAATAAATCATAT 765
consensus_6906#1      ------------------------------------------------------------
consensus_6906#2      ------------------------------------------------------------
                                                                                  

consensus_6906#3      --------------------
consensus_6906#4      --------------------
consensus_6906#0      TTACATCGCCGGGTCTCCCG 785
consensus_6906#1      --------------------
consensus_6906#2      --------------------
                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)