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Anopheles gambiae
cluster # 6939 cluster # 6939       Sequences # 6       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6939#0 length = 840 sequences # 1  
consensus_6939#1 length = 714 sequences # 1  
consensus_6939#2 length = 666 sequences # 1  
consensus_6939#3 length = 642 sequences # 1  
consensus_6939#4 length = 601 sequences # 1  
consensus_6939#5 length = 425 sequences # 1  

consensusID : consensus_6939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 840
fasta sequence
                              [GGCAAGAATCGGCACGAGGTTTGCACATTTACTATACGCACATTTGTAATTTGTTTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAAACTATCGCACAATAGCCGCGAGTATAGAGCAACTGGAGGAGGACCATGCACGATGCATAGTTTTTCTGCACTTGAAAGTCACGTTATTGACATCTTGCAGCTAAAAGATAGCGTTGTTGGGCTAAACACTAAAGGGTTAGGAGCACCATCTAATTCATCAGGTTCAGCACCTATCTCTGTTCGGAAAACACCGTTGGCAGAAAGGCCATCACAATCAACAACCCAACCAATTTCACTCTCATCACCATTGCCTGCGTCACCATCTCGTGCAGCACCAACTCCACAGGTTATGGAGTTAACGTCATCACCATCTCTACAGCATCTAAACCAAACGAATGACAATGAAAGAACACCACAGAGATCATCTCAGTCAGGGCAAAATAACACAAATCAACGTACAACACGACGCAAAGAACAATAGCTGAATTGCAATTGCTAGGAACATAAGCATTATGGGTCGGAAATTTAAAACAGCAGCGAAAATTATTATTCGGCAAGACAACAGCNTAGATTTGGATAAAGGAAAGACTAGATTTTCACAAGAACCAAAATTGGTATTTCCGAAAAATACAACTACGCACTTTACACCCACATATGGCACTTTAAACCAAGCCAAAGGCTNATCTAAAAGGAGAGGAATTGAATCNTCACANGGATTACCGTAGAAAGACGGAGTTCAAAT]

[+] EMBL BX467780             [GGCAAGAATCGGCACGAGGTTTGCACATTTACTATACGCACATTTGTAATTTGTTTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAAACTATCGCACAATAGCCGCGAGTATAGAGCAACTGGAGGAGGACCATGCACGATGCATAGTTTTTCTGCACTTGAAAGTCACGTTATTGACATCTTGCAGCTAAAAGATAGCGTTGTTGGGCTAAACACTAAAGGGTTAGGAGCACCATCTAATTCATCAGGTTCAGCACCTATCTCTGTTCGGAAAACACCGTTGGCAGAAAGGCCATCACAATCAACAACCCAACCAATTTCACTCTCATCACCATTGCCTGCGTCACCATCTCGTGCAGCACCAACTCCACAGGTTATGGAGTTAACGTCATCACCATCTCTACAGCATCTAAACCAAACGAATGACAATGAAAGAACACCACAGAGATCATCTCAGTCAGGGCAAAATAACACAAATCAACGTACAACACGACGCAAAGAACAATAGCTGAATTGCAATTGCTAGGAACATAAGCATTATGGGTCGGAAATTTAAAACAGCAGCGAAAATTATTATTCGGCAAGACAACAGCNTAGATTTGGATAAAGGAAAGACTAGATTTTCACAAGAACCAAAATTGGTATTTCCGAAAAATACAACTACGCACTTTACACCCACATATGGCACTTTAAACCAAGCCAAAGGCTNATCTAAAAGGAGAGGAATTGAATCNTCACANGGATTACCGTAGAAAGACGGAGTTCAAAT]


>consensus_6939#0 GGCAAGAATCGGCACGAGGTTTGCACATTTACTATACGCACATTTGTAATTTGTTTGAAA CTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATAGCAAAGGCATTTT TACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAAACTATCGCACAATAGCCGCGAG TATAGAGCAACTGGAGGAGGACCATGCACGATGCATAGTTTTTCTGCACTTGAAAGTCAC GTTATTGACATCTTGCAGCTAAAAGATAGCGTTGTTGGGCTAAACACTAAAGGGTTAGGA GCACCATCTAATTCATCAGGTTCAGCACCTATCTCTGTTCGGAAAACACCGTTGGCAGAA AGGCCATCACAATCAACAACCCAACCAATTTCACTCTCATCACCATTGCCTGCGTCACCA TCTCGTGCAGCACCAACTCCACAGGTTATGGAGTTAACGTCATCACCATCTCTACAGCAT CTAAACCAAACGAATGACAATGAAAGAACACCACAGAGATCATCTCAGTCAGGGCAAAAT AACACAAATCAACGTACAACACGACGCAAAGAACAATAGCTGAATTGCAATTGCTAGGAA CATAAGCATTATGGGTCGGAAATTTAAAACAGCAGCGAAAATTATTATTCGGCAAGACAA CAGCNTAGATTTGGATAAAGGAAAGACTAGATTTTCACAAGAACCAAAATTGGTATTTCC GAAAAATACAACTACGCACTTTACACCCACATATGGCACTTTAAACCAAGCCAAAGGCTN ATCTAAAAGGAGAGGAATTGAATCNTCACANGGATTACCGTAGAAAGACGGAGTTCAAAT



consensusID : consensus_6939#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 714
fasta sequence
                              [TATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGATAAAGAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGAAAAACGAAAAACTACAACATAGTCACAGTTTGAAAAAAGGGTGGAACTGATAGAAAGGAACAAAGCTATCATACATGATAAGCAAAAAGGAACCTCAACTTTTTGGAATGATATTGCCAAAGATCTGAATCTCTTAGGACCCCCGACTAAAGACGGTTCTGGGTGGAAAAAGGTATGGGCAGATTTTAGATCGGGGATGAAGAAAAAACTATCGCACAATAGCCGCGAGTATAGAGCAACTGGAGGAGGACCATGCACGATGCATAGTTTTTCTGCACTTGAAAGTCACGTTATTGACATCTTGCAGTTAAAAGATAGCGTTGTTGGGCTAAACACTAAAGGGTTAGGAGCACCATCTAATTCATCAGGTTCAGCACCTATCTCTGTTCGGAAAACACCGTTGGCAGAAAGGCCATCACAATCAACAACCCAACCAATTTCACTCTCATCACCATTGCCTGCGTCACCATCTCGTGCAGCACCAACTCCACAGGNTATGGAGTTAACGTCATCACCATCTCTACAGCATCTAACCAACGAAT]

[+] EMBL BX620782             [TATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGATAAAGAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGAAAAACGAAAAACTACAACATAGTCACAGTTTGAAAAAAGGGTGGAACTGATAGAAAGGAACAAAGCTATCATACATGATAAGCAAAAAGGAACCTCAACTTTTTGGAATGATATTGCCAAAGATCTGAATCTCTTAGGACCCCCGACTAAAGACGGTTCTGGGTGGAAAAAGGTATGGGCAGATTTTAGATCGGGGATGAAGAAAAAACTATCGCACAATAGCCGCGAGTATAGAGCAACTGGAGGAGGACCATGCACGATGCATAGTTTTTCTGCACTTGAAAGTCACGTTATTGACATCTTGCAGTTAAAAGATAGCGTTGTTGGGCTAAACACTAAAGGGTTAGGAGCACCATCTAATTCATCAGGTTCAGCACCTATCTCTGTTCGGAAAACACCGTTGGCAGAAAGGCCATCACAATCAACAACCCAACCAATTTCACTCTCATCACCATTGCCTGCGTCACCATCTCGTGCAGCACCAACTCCACAGGNTATGGAGTTAACGTCATCACCATCTCTACAGCATCTAACCAACGAAT]


>consensus_6939#1 TATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACAT AAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGA TAAAGAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGAAAAACGAA AAACTACAACATAGTCACAGTTTGAAAAAAGGGTGGAACTGATAGAAAGGAACAAAGCTA TCATACATGATAAGCAAAAAGGAACCTCAACTTTTTGGAATGATATTGCCAAAGATCTGA ATCTCTTAGGACCCCCGACTAAAGACGGTTCTGGGTGGAAAAAGGTATGGGCAGATTTTA GATCGGGGATGAAGAAAAAACTATCGCACAATAGCCGCGAGTATAGAGCAACTGGAGGAG GACCATGCACGATGCATAGTTTTTCTGCACTTGAAAGTCACGTTATTGACATCTTGCAGT TAAAAGATAGCGTTGTTGGGCTAAACACTAAAGGGTTAGGAGCACCATCTAATTCATCAG GTTCAGCACCTATCTCTGTTCGGAAAACACCGTTGGCAGAAAGGCCATCACAATCAACAA CCCAACCAATTTCACTCTCATCACCATTGCCTGCGTCACCATCTCGTGCAGCACCAACTC CACAGGNTATGGAGTTAACGTCATCACCATCTCTACAGCATCTAACCAACGAAT



consensusID : consensus_6939#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence
                              [AGAATCGCCCGAGGTTTATTCATGCACATACTAGATGTTGGATCATAGCTTGTTCAATTAAAATAACTAACAGACGAGAGTGGAATTCTGAAATGTGTTTGTATTACAGCATATTACACTAAATCCGTGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATTTCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTTTCCGTTCCGCCGGAATCTAAACGCTAGCAGTTGACTGTAAACCGAATGTGCAAAATTGAGTTTNCTATTTTTATTAGGCTAAACTTAAAACTTGTGTCTCTGTTTCACCAATACTGTTATGTGTGGGGATGATGTTTCTTATCAACCAAAGATTATTTCCTCACCAATTTNAATTCTTCCAATNNTAGCGCCAACTTGGCTTGTCGTTGGTATTCCAAAGGCCGCAAGGTTAGCGAAGGTAACCAAGGTGGNTAGTNGTCCAAAGTTGCTTACACCCANGGGTTCCAAGGATCCCCACACACAGAAGGGTTAATTTACCGGGTCCCTTAAGCCTTTGCGACACAACNTTAAATTCTCTTGGGCGAGAGGGGCACCACACAACGGGGCGGCACACACATTTNCGTGGCGCCCGGCCTTGGTGCTTTCAGNAAATTCAAAGGCCCACAGA]

[+] EMBL AL930086             [AGAATCGCCCGAGGTTTATTCATGCACATACTAGATGTTGGATCATAGCTTGTTCAATTAAAATAACTAACAGACGAGAGTGGAATTCTGAAATGTGTTTGTATTACAGCATATTACACTAAATCCGTGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATTTCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTTTCCGTTCCGCCGGAATCTAAACGCTAGCAGTTGACTGTAAACCGAATGTGCAAAATTGAGTTTNCTATTTTTATTAGGCTAAACTTAAAACTTGTGTCTCTGTTTCACCAATACTGTTATGTGTGGGGATGATGTTTCTTATCAACCAAAGATTATTTCCTCACCAATTTNAATTCTTCCAATNNTAGCGCCAACTTGGCTTGTCGTTGGTATTCCAAAGGCCGCAAGGTTAGCGAAGGTAACCAAGGTGGNTAGTNGTCCAAAGTTGCTTACACCCANGGGTTCCAAGGATCCCCACACACAGAAGGGTTAATTTACCGGGTCCCTTAAGCCTTTGCGACACAACNTTAAATTCTCTTGGGCGAGAGGGGCACCACACAACGGGGCGGCACACACATTTNCGTGGCGCCCGGCCTTGGTGCTTTCAGNAAATTCAAAGGCCCACAGA]


>consensus_6939#2 AGAATCGCCCGAGGTTTATTCATGCACATACTAGATGTTGGATCATAGCTTGTTCAATTA AAATAACTAACAGACGAGAGTGGAATTCTGAAATGTGTTTGTATTACAGCATATTACACT AAATCCGTGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATTTCGAATGGAA ATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTTTCCGTTCCGCCGGAATCTAAAC GCTAGCAGTTGACTGTAAACCGAATGTGCAAAATTGAGTTTNCTATTTTTATTAGGCTAA ACTTAAAACTTGTGTCTCTGTTTCACCAATACTGTTATGTGTGGGGATGATGTTTCTTAT CAACCAAAGATTATTTCCTCACCAATTTNAATTCTTCCAATNNTAGCGCCAACTTGGCTT GTCGTTGGTATTCCAAAGGCCGCAAGGTTAGCGAAGGTAACCAAGGTGGNTAGTNGTCCA AAGTTGCTTACACCCANGGGTTCCAAGGATCCCCACACACAGAAGGGTTAATTTACCGGG TCCCTTAAGCCTTTGCGACACAACNTTAAATTCTCTTGGGCGAGAGGGGCACCACACAAC GGGGCGGCACACACATTTNCGTGGCGCCCGGCCTTGGTGCTTTCAGNAAATTCAAAGGCC CACAGA



consensusID : consensus_6939#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 642
fasta sequence
                              [CAGAATCGNCACGAGGTTAGACATTTTGCACATTTACTATACGCAATTTGTAATTTGTTTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGTACAGAAGTATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTGTGTGTGATGGATAAAGAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGTAAATTTTCTACGAATTGTTTGGTATTATAATAAATAACGCGTCAGTTATTCAATGCCAACATACTAGATGTTGGATCATAGCTTGTTCAATTAAAATAACTAAACAGACGAGAGTGGAATTCTGAAATGTGTTTTGTATTACAGCATATTACACTAAATCCGTGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATTTCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTTTCCGTTCCGCCGGAATCTAGAACGCTAGCAGTTGACTGTAAACCGAATGTGCAAAATTGAGTTTTTTTTTTAGCTAAACTTAAAACTGTGCTCTGTTCACCAAATACTGTTA]

[+] EMBL AL697091             [CAGAATCGNCACGAGGTTAGACATTTTGCACATTTACTATACGCAATTTGTAATTTGTTTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGTACAGAAGTATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTGTGTGTGATGGATAAAGAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGTAAATTTTCTACGAATTGTTTGGTATTATAATAAATAACGCGTCAGTTATTCAATGCCAACATACTAGATGTTGGATCATAGCTTGTTCAATTAAAATAACTAAACAGACGAGAGTGGAATTCTGAAATGTGTTTTGTATTACAGCATATTACACTAAATCCGTGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATTTCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTTTCCGTTCCGCCGGAATCTAGAACGCTAGCAGTTGACTGTAAACCGAATGTGCAAAATTGAGTTTTTTTTTTAGCTAAACTTAAAACTGTGCTCTGTTCACCAAATACTGTTA]


>consensus_6939#3 CAGAATCGNCACGAGGTTAGACATTTTGCACATTTACTATACGCAATTTGTAATTTGTTT GAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGTACAGAAGTATAGCAAAGGCAT TTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAA ATAGTTGCCGTATTCCAAATCGTGGTGCATTTTGTGTGTGATGGATAAAGAGACGCAGTT TTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGTAAATTTTCTACGAATTGTTTGGT ATTATAATAAATAACGCGTCAGTTATTCAATGCCAACATACTAGATGTTGGATCATAGCT TGTTCAATTAAAATAACTAAACAGACGAGAGTGGAATTCTGAAATGTGTTTTGTATTACA GCATATTACACTAAATCCGTGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAA TTTCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTTTCCGTTCCGC CGGAATCTAGAACGCTAGCAGTTGACTGTAAACCGAATGTGCAAAATTGAGTTTTTTTTT TAGCTAAACTTAAAACTGTGCTCTGTTCACCAAATACTGTTA



consensusID : consensus_6939#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 601
fasta sequence
                              [CCGCGGACGCGTGGGTTGGCATCAGTTGGACATTTTGCACATTTACTATACGCAATTTGTAATTTGTTTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGATAAAGAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGTAAATTTTCTACGAATTGTTTGGTATTATAATAAATAACGCGTCAGTTATTCAATGCCAACATACTAGATGTTGGATCATAGCTTGTTCAATTAAAATAACTAACAGACGAGAGTGGAATTCTGAAATGTGTTTTGTATTACAGCATATTACACTAAATCCGAGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATTTCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTTTCCGTTCCGCCGGAATCTAGAACGCTAGCAGTTGACTGTAGACCGAATGTGCAAAATTGAG]

[+] EMBL BM622467             [CCGCGGACGCGTGGGTTGGCATCAGTTGGACATTTTGCACATTTACTATACGCAATTTGTAATTTGTTTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGATAAAGAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGTAAATTTTCTACGAATTGTTTGGTATTATAATAAATAACGCGTCAGTTATTCAATGCCAACATACTAGATGTTGGATCATAGCTTGTTCAATTAAAATAACTAACAGACGAGAGTGGAATTCTGAAATGTGTTTTGTATTACAGCATATTACACTAAATCCGAGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATTTCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTTTCCGTTCCGCCGGAATCTAGAACGCTAGCAGTTGACTGTAGACCGAATGTGCAAAATTGAG]


>consensus_6939#4 CCGCGGACGCGTGGGTTGGCATCAGTTGGACATTTTGCACATTTACTATACGCAATTTGT AATTTGTTTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATA GCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACATAAGC AGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGATAAA GAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGTAAATTTTCTACG AATTGTTTGGTATTATAATAAATAACGCGTCAGTTATTCAATGCCAACATACTAGATGTT GGATCATAGCTTGTTCAATTAAAATAACTAACAGACGAGAGTGGAATTCTGAAATGTGTT TTGTATTACAGCATATTACACTAAATCCGAGATATGCGGTTGATGAAATTCGGCAGTGCT TTAAACACAATTTCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCAACTT TCCGTTCCGCCGGAATCTAGAACGCTAGCAGTTGACTGTAGACCGAATGTGCAAAATTGA G



consensusID : consensus_6939#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence
                              [GGTGTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATAGCAAAGGCATTTTTACTGGCAAAAGCTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGATAAAGAAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGACCTCATCAGATGCCTGATGACACCTAGATGGATTAGGTGAAGCCAATCAGTGGTAGGGACATCTACTCGAAATCTGTGAGGTCGATCAGAGGAGTGTAGCATATGCAATGCGTCTTGTACTCTCCGTCCTTGAACTTTTATGCGTTCTTTTCGGAGCATATATCCGTCAAAATGCACCGATGCTTGGAATGGTCGTAGC]

[+] EMBL CNS09GJL             [GGTGTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATAGCAAAGGCATTTTTACTGGCAAAAGCTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGATAAAGAAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGACCTCATCAGATGCCTGATGACACCTAGATGGATTAGGTGAAGCCAATCAGTGGTAGGGACATCTACTCGAAATCTGTGAGGTCGATCAGAGGAGTGTAGCATATGCAATGCGTCTTGTACTCTCCGTCCTTGAACTTTTATGCGTTCTTTTCGGAGCATATATCCGTCAAAATGCACCGATGCTTGGAATGGTCGTAGC]


>consensus_6939#5 GGTGTGAAACTTTAAGTTGCATTTAACGAAACGAATGAACAGGGTACAGAAGTATAGCAA AGGCATTTTTACTGGCAAAAGCTATCCCTTTGTGTGGATTGAGAAAAATACATAAGCAGT TTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGATAAAGAA GACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGACCTCATCAGATGCC TGATGACACCTAGATGGATTAGGTGAAGCCAATCAGTGGTAGGGACATCTACTCGAAATC TGTGAGGTCGATCAGAGGAGTGTAGCATATGCAATGCGTCTTGTACTCTCCGTCCTTGAA CTTTTATGCGTTCTTTTCGGAGCATATATCCGTCAAAATGCACCGATGCTTGGAATGGTC GTAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6939#3      ------------------------------------------------------------
consensus_6939#4      ------------------------------------------------------------
consensus_6939#2      ------------------------------------------------------------
consensus_6939#5      ------------------------------------------------------------
consensus_6939#0      ------------------------------------------------------------
consensus_6939#1      TATAGCAAAGGCATTTTTACTGGCAAAAGTATCCCTTTGTGTGGATTGAGAAAAATACAT 60
                                                                                  

consensus_6939#3      ------------------------------------------------------------
consensus_6939#4      ------------------------------------------------------------
consensus_6939#2      ------------------------------------------------------------
consensus_6939#5      ------------------------------------------------------------
consensus_6939#0      ------------------------------------------------------------
consensus_6939#1      AAGCAGTTTTTAAAATAGTTGCCGTATTCCAAATCGTGGTGCATTTTTGTGTGTGATGGA 120
                                                                                  

consensus_6939#3      ------------------------------------------------------------
consensus_6939#4      ------------------------------------------------------------
consensus_6939#2      ------------------------------------------------------------
consensus_6939#5      ------------------------------------------------------------
consensus_6939#0      ------------------------------------------------------------
consensus_6939#1      TAAAGAGACGCAGTTTTCGTGAAGTTGTATGCATTAAGCAATCATAACAGGAAAAACGAA 180
                                                                                  

consensus_6939#3      ----------------------------CAGAATCGNCACGAGGTTAGACATTTTGCACA 32
consensus_6939#4      ------------------CCGCGGACGCGTGGGTTGGCATCAG-TTGGACATTTTGCACA 41
consensus_6939#2      -------AGAATCGCCCGAGGTTTATTCATGCACATACTAGATGTTGGAT-CATAGCTTG 52
consensus_6939#5      ------------------------------------------------------------
consensus_6939#0      ------------------------------GGCAAGAATCGGCACGAGGTTTGCACATTT 30
consensus_6939#1      AAACTACAACATAGTCACAGTTTGAAAAAAGGGTGGAACTGATAGAAAGGA-ACAAAGCT 239
                                                                                  

consensus_6939#3      TTTACTATACGCAATTTGTA-ATTTGTTTGAAACTTTAAGTTGCATTT--AACGAAACGA 89
consensus_6939#4      TTTACTATACGCAATTTGTA-ATTTGTTTGAAACTTTAAGTTGCATTT--AACGAAACGA 98
consensus_6939#2      TTCAATTAAAATAACTAACAGACGAGAGTGGAATTCTGAAATGTGTTTGTATTACAGCAT 112
consensus_6939#5      ------------------------GGTGTGAAACTTTAAGTTGCATTT--AACGAAACGA 34
consensus_6939#0      ACTATACGCAC--ATTTGTA-ATTTGTTTGAAACTTTAAGTTGCATTT--AACGAAACGA 85
consensus_6939#1      ATCATACATGATAAGCAAAA-AGGAACCTCAACTTTTTGGAATGATAT--TGCCAAAGAT 296
                                                  *  *  * *        * *       *    

consensus_6939#3      ATGA-ACAGG-TACA-GAAGTATAGCAAAGGCATTTTTAC--TGGCAAAAGT-------A 137
consensus_6939#4      ATGA-ACAGGGTACA-GAAGTATAGCAAAGGCATTTTTAC--TGGCAAAAGT-------A 147
consensus_6939#2      ATTACACTAAATCCGTGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAAC-------A 165
consensus_6939#5      ATGA-ACAGGGTACA-GAAGTATAGCAAAGGCATTTTTAC--TGGCAAAAGCT------A 84
consensus_6939#0      ATGA-ACAGGGTACA-GAAGTATAGCAAAGGCATTTTTAC--TGGCAAAAG-------TA 134
consensus_6939#1      CTGA-ATCTCTTAGG-ACCCCCGACTAAAGACGGTTCTGGG-TGGAAAAAGGTATGGGCA 353
                       * * *     *                *     **      **    **         *

consensus_6939#3      TCCCTTTGTGTGGA--TTGAGAAAAATACATAA-GCAGTTTTTAAAATAGTTGCCGTATT 194
consensus_6939#4      TCCCTTTGTGTGGA--TTGAGAAAAATACATAA-GCAGTTTTTAAAATAGTTGCCGTATT 204
consensus_6939#2      CAATTTCGAATGGAAATTAACACGTTCAGCCCG-GCGCTGATTTTCATCAACTTTCCGTT 224
consensus_6939#5      TCCCTTTGTGTGGA--TTGAGAAAAATACATAA-GCAGTTTTTAAAATAGTTGCCGTATT 141
consensus_6939#0      TCCCTTTG--TGTGGATTGAGAAAAAACTATCGCACAATAGCCGCGAGTATAGAGCAACT 192
consensus_6939#1      GATTTTAGATCGGGGATGAAGAAAAAACTATCGCACAATAGCCGCGAGTATAGAGCAACT 413
                          ** *   *    *  * *             *  *       *            *

consensus_6939#3      CCAA-ATCGTGGTGCATTTT--GTGTGTGATGGATAA--AGAGACGCAGTTTTCGTGAAG 249
consensus_6939#4      CCAA-ATCGTGGTGCATTTTT-GTGTGTGATGGATAA--AGAGACGCAGTTTTCGTGAAG 260
consensus_6939#2      CCGC-CGGAATCTAAACGCTA-GCAGTTGACTGTAAACCGAATGTGCAAAATTGAGTTTN 282
consensus_6939#5      CCAA-ATCGTGGTGCATTTTT-GTGTGTGATGGATAAA-GAAGACGCAGTTTTCGTGAAG 198
consensus_6939#0      GGAGGAGGACCATGCACGATGCATAGTTTTTCTGCACTTGAAAGTCACGTTATTGACATC 252
consensus_6939#1      GGAGGAGGACCATGCACGATGCATAGTTTTTCTGCACTTGAAAGTCACGTTATTGACATC 473
                                  *  *   *       *       *     *          *       

consensus_6939#3      TTGTATGCATTAAGCAATCATAACAGGTAAATTTTCTACGAATTGTTTGGTATTAT--AA 307
consensus_6939#4      TTGTATGCATTAAGCAATCATAACAGGTAAATTTTCTACGAATTGTTTGGTATTAT--AA 318
consensus_6939#2      CTATTTTTATTAGGCTAAACTTAAAACTTGTGTCTCTGT---TTCACCAATACTGT--TA 337
consensus_6939#5      TTGTATGCATTAAGCAATCATAACAGG--ACCTCATCAGATGCCTGATGACACCTA--GA 254
consensus_6939#0      TTGCAGCTAAAAGATAGCGTTGTTGGGCTAAA-CACTAAAGGGTTAGGAGCACCATCTAA 311
consensus_6939#1      TTGCAGTTAAAAGATAGCGTTGTTGGGCTAAA-CACTAAAGGGTTAGGAGCACCATCTAA 532
                       *      *  *        *                              *       *

consensus_6939#3      TAAATAACGCGTCA-GTTATTCAATGCCAACATACTAGATGTTGG---ATCATAGCTTGT 363
consensus_6939#4      TAAATAACGCGTCA-GTTATTCAATGCCAACATACTAGATGTTGG---ATCATAGCTTGT 374
consensus_6939#2      TGTGTGGGGATGAT-GTTTCTTATCAACCAAAGATTATTTCCTCACCAATTTNAATTCTT 396
consensus_6939#5      TGGATTAGG-TGAA-GCCAATCAGTGGT--AGGGACATCTACTCG---AAATCTGTGAGG 307
consensus_6939#0      TTCATCAGGTTCAGCACCTATCTCTGTTCGGAAAACA-CCGTTGGC--AGAAAGGCCATC 368
consensus_6939#1      TTCATCAGGTTCAGCACCTATCTCTGTTCGGAAAACA-CCGTTGGC--AGAAAGGCCATC 589
                      *   *   *           *               *     *     *           

consensus_6939#3      TCAATTAAAATAACTAAACAGACGAGAGT-GGAATTCTGAAATGTGTTTTGTATTACAGC 422
consensus_6939#4      TCAATTAAAATAACTAA-CAGACGAGAGT-GGAATTCTGAAATGTGTTTTGTATTACAGC 432
consensus_6939#2      CCAATNNTAGCGCCAACTTGGCTTGTCGTTGGTATTCCAAAGGCCGCAAGGTTAGCGAAG 456
consensus_6939#5      TCGATCAGAGGAGTG---TAGCATATGCAATGCGTCTTGTACTCTCCGTCCTTGA--ACT 362
consensus_6939#0      ACAATCAACAACCCAACCAATTTCACTCTCATCA--CCATTGCCTGCGTCACCATCTCGT 426
consensus_6939#1      ACAATCAACAACCCAACCAATTTCACTCTCATCA--CCATTGCCTGCGTCACCATCTCGT 647
                       * **                                                       

consensus_6939#3      ATATTACACTAAATCCGTGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATT 482
consensus_6939#4      ATATTACACTAAATCCGAGATATGCGGTTGATGAAATTCGGCAGTGCTTTAAACACAATT 492
consensus_6939#2      GTAACCAAGGTGGNTAGTNGTCCAAAGTTGCTTACACCCANGGGTTCCAAGGATCCCCAC 516
consensus_6939#5      TTTATGCGTTCTTTTCGGAGCATATATCCGTCAAAATGCACCGATGCTTGGAATGGTCGT 422
consensus_6939#0      GCAGCACCAACTCCACAGGTTATGGAGTTAACGTCATC--ACCATCTCTACAGCATCTAA 484
consensus_6939#1      GCAGCACCAACTCCACAGGNTATGGAGTTAACGTCATC--ACCATCTCTACAGCATCTAA 705
                                                         *        *               

consensus_6939#3      TCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCA--ACTTTCCGTTCCGC 540
consensus_6939#4      TCGAATGGAAATTAACACGTTCAGCCCGGCGCTGATTTTCATCA--ACTTTCCGTTCCGC 550
consensus_6939#2      ACACAGAAGGGTTAATTTACCGGGTCCCTTAAGCCTTTGCGACACAACNTTAAATTCTCT 576
consensus_6939#5      AGC--------------------------------------------------------- 425
consensus_6939#0      ACCAAACGAATGACAATGAAAGAACACCACAGAGATCATCTCAGTCAGGGCAAAATAACA 544
consensus_6939#1      CC--AACGAAT------------------------------------------------- 714
                                                                                  

consensus_6939#3      CGGAATCTAGAACGCTAGCAGTTGACTGTAAACCGAATGTGCAAAATTGAGTTTTTTTTT 600
consensus_6939#4      CGGAATCTAGAACGCTAGCAGTTGACTGTAGACCGAATGTGCAAAATTGAG--------- 601
consensus_6939#2      TGGG--CGAGAGGGGCACCACACAACGG--GGCGGCACACACATTTNCGTGGCGCCCGGC 632
consensus_6939#5      ------------------------------------------------------------
consensus_6939#0      CAAATCAACGTACAACACGACGCAAAGAACAATAGCTGAATTGCAATTGCTAGGAACATA 604
consensus_6939#1      ------------------------------------------------------------
                                                                                  

consensus_6939#3      TAGCTAAACTTAAAACTGTGCTCTGTTCACCAAATACTGTTA------------------ 642
consensus_6939#4      ------------------------------------------------------------
consensus_6939#2      CTTGGTGCTTTCAGNAAATTCAAAGGCCCACAGA-------------------------- 666
consensus_6939#5      ------------------------------------------------------------
consensus_6939#0      AGCATTATGGGTCGGAAATTTAAAACAGCAGCGAAAATTATTATTCGGCAAGACAACAGC 664
consensus_6939#1      ------------------------------------------------------------
                                                                                  

consensus_6939#3      ------------------------------------------------------------
consensus_6939#4      ------------------------------------------------------------
consensus_6939#2      ------------------------------------------------------------
consensus_6939#5      ------------------------------------------------------------
consensus_6939#0      NTAGATTTGGATAAAGGAAAGACTAGATTTTCACAAGAACCAAAATTGGTATTTCCGAAA 724
consensus_6939#1      ------------------------------------------------------------
                                                                                  

consensus_6939#3      ------------------------------------------------------------
consensus_6939#4      ------------------------------------------------------------
consensus_6939#2      ------------------------------------------------------------
consensus_6939#5      ------------------------------------------------------------
consensus_6939#0      AATACAACTACGCACTTTACACCCACATATGGCACTTTAAACCAAGCCAAAGGCTNATCT 784
consensus_6939#1      ------------------------------------------------------------
                                                                                  

consensus_6939#3      --------------------------------------------------------
consensus_6939#4      --------------------------------------------------------
consensus_6939#2      --------------------------------------------------------
consensus_6939#5      --------------------------------------------------------
consensus_6939#0      AAAAGGAGAGGAATTGAATCNTCACANGGATTACCGTAGAAAGACGGAGTTCAAAT 840
consensus_6939#1      --------------------------------------------------------
                                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)