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Anopheles gambiae
cluster # 6951 cluster # 6951       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6951#0 length = 1036 sequences # 1  
consensus_6951#1 length = 839 sequences # 5  

consensusID : consensus_6951#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1036
fasta sequence
                              [CTCATGCCANATTGCCCAGGTTTTTGTCTGGACACAACATGACGCGGACNGATAGTNATCGCTAGACGCAGACACAAATGCTGCTCACAAGGTGTGGTACATCCTGCACCGCATACCACACCGTATACGCAGCGATAGGCGGCTGCTGTATTACCAGCCTGGCAGTGAAACCCTGCAACCGATGGTTACATACAAACAGACCAGCGCACAGAACCCTTACACTGATAGCTGCCCCTGCTGGAGCGTAACGATTTGTGCGCGTACNAGGATCCTGACGACGGTCAGNTATTACTGAGTGGNACTTGATTGACAGAAACGCATCATTGCTAGCNACCTACAGAGACACAAGCAAGCNACGGTGTTAACTGCGACATGTATTACTCCAAAGTGCGGANATAGGGGCGCTGTATANTACATGGTTGCATNNCACAAATCATACTAACCACAGCGAGNCCCGGTGGGCTTGGGAACACCCGGNGGCCCGGANGCTAAAATATATCTGGCATACCGANAGAGTTGCCGCAATTNGCNGATGGNCACCGGTGTNGGACAGGCCCCNGACAGTGGACACTTNCAGAANGGAACAGAACGCACACCTTNATTNGGAACCAGCCTATGTTAACCCGGAGACTTTGNCTCCAATACAGGCAAATGTGGGTAGGCGAAGCAGGTTACGAGGAAAGGCCAAGAGAAGCGGCAGNNCAAACCCCGACTAAAACCAAGGNGAGACAANTGGAATTGCGAGAGAGCCCCCGAAACACNTNTTACCAACACGCGANACAGAGGCACCCGATCTGGCACAAACGATGANAATGGGCAACAAGCAATGGAGGAAGAATTTAAGGNCACATGGAGGGATTATGGNACANCAGNACAGACGAGATACAACTACCCGAGCCCCTTTGGGNTACACACCCGGNNGGCNAGAGNGAGTATCCNCACGGNGTCAGACACTAGCAACCAGGTTTAAGATTAATAGCCNACAACAAGGGAACTTTTCCCCCTTACCAGCTNGCAACATTATGCCANCCAACAG]

[+] EMBL AL693666             [CTCATGCCANATTGCCCAGGTTTTTGTCTGGACACAACATGACGCGGACNGATAGTNATCGCTAGACGCAGACACAAATGCTGCTCACAAGGTGTGGTACATCCTGCACCGCATACCACACCGTATACGCAGCGATAGGCGGCTGCTGTATTACCAGCCTGGCAGTGAAACCCTGCAACCGATGGTTACATACAAACAGACCAGCGCACAGAACCCTTACACTGATAGCTGCCCCTGCTGGAGCGTAACGATTTGTGCGCGTACNAGGATCCTGACGACGGTCAGNTATTACTGAGTGGNACTTGATTGACAGAAACGCATCATTGCTAGCNACCTACAGAGACACAAGCAAGCNACGGTGTTAACTGCGACATGTATTACTCCAAAGTGCGGANATAGGGGCGCTGTATANTACATGGTTGCATNNCACAAATCATACTAACCACAGCGAGNCCCGGTGGGCTTGGGAACACCCGGNGGCCCGGANGCTAAAATATATCTGGCATACCGANAGAGTTGCCGCAATTNGCNGATGGNCACCGGTGTNGGACAGGCCCCNGACAGTGGACACTTNCAGAANGGAACAGAACGCACACCTTNATTNGGAACCAGCCTATGTTAACCCGGAGACTTTGNCTCCAATACAGGCAAATGTGGGTAGGCGAAGCAGGTTACGAGGAAAGGCCAAGAGAAGCGGCAGNNCAAACCCCGACTAAAACCAAGGNGAGACAANTGGAATTGCGAGAGAGCCCCCGAAACACNTNTTACCAACACGCGANACAGAGGCACCCGATCTGGCACAAACGATGANAATGGGCAACAAGCAATGGAGGAAGAATTTAAGGNCACATGGAGGGATTATGGNACANCAGNACAGACGAGATACAACTACCCGAGCCCCTTTGGGNTACACACCCGGNNGGCNAGAGNGAGTATCCNCACGGNGTCAGACACTAGCAACCAGGTTTAAGATTAATAGCCNACAACAAGGGAACTTTTCCCCCTTACCAGCTNGCAACATTATGCCANCCAACAG]


>consensus_6951#0 CTCATGCCANATTGCCCAGGTTTTTGTCTGGACACAACATGACGCGGACNGATAGTNATC GCTAGACGCAGACACAAATGCTGCTCACAAGGTGTGGTACATCCTGCACCGCATACCACA CCGTATACGCAGCGATAGGCGGCTGCTGTATTACCAGCCTGGCAGTGAAACCCTGCAACC GATGGTTACATACAAACAGACCAGCGCACAGAACCCTTACACTGATAGCTGCCCCTGCTG GAGCGTAACGATTTGTGCGCGTACNAGGATCCTGACGACGGTCAGNTATTACTGAGTGGN ACTTGATTGACAGAAACGCATCATTGCTAGCNACCTACAGAGACACAAGCAAGCNACGGT GTTAACTGCGACATGTATTACTCCAAAGTGCGGANATAGGGGCGCTGTATANTACATGGT TGCATNNCACAAATCATACTAACCACAGCGAGNCCCGGTGGGCTTGGGAACACCCGGNGG CCCGGANGCTAAAATATATCTGGCATACCGANAGAGTTGCCGCAATTNGCNGATGGNCAC CGGTGTNGGACAGGCCCCNGACAGTGGACACTTNCAGAANGGAACAGAACGCACACCTTN ATTNGGAACCAGCCTATGTTAACCCGGAGACTTTGNCTCCAATACAGGCAAATGTGGGTA GGCGAAGCAGGTTACGAGGAAAGGCCAAGAGAAGCGGCAGNNCAAACCCCGACTAAAACC AAGGNGAGACAANTGGAATTGCGAGAGAGCCCCCGAAACACNTNTTACCAACACGCGANA CAGAGGCACCCGATCTGGCACAAACGATGANAATGGGCAACAAGCAATGGAGGAAGAATT TAAGGNCACATGGAGGGATTATGGNACANCAGNACAGACGAGATACAACTACCCGAGCCC CTTTGGGNTACACACCCGGNNGGCNAGAGNGAGTATCCNCACGGNGTCAGACACTAGCAA CCAGGTTTAAGATTAATAGCCNACAACAAGGGAACTTTTCCCCCTTACCAGCTNGCAACA TTATGCCANCCAACAG



consensusID : consensus_6951#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 839
fasta sequence
                              [TCGCTAGGTAAGCATTTCTAAACCCCGTACCGTGCGCTGTCTTTAGCTGCGCGCACTGAAACATTCTTTCGGTAGACGCAGACACAATGCTGCTCACAAGGTGTGGTACATCCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCCGGCTGCGTTTCCAGCCCTGGCAGTGAAACCCGCAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC-GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCG-GCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGGAGGGTCGGTTACACGTGTTCAAAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTACCGACGAGCAGGAGCCGAATGAATGCAAAACGCGACTGAAGCGTATCTTCCCGGAGGCGGAGACGGTCGCCGACTCGGCGCTACCGTACACGGCGTTCCGGTATTCGCTCGGTGTCGGCGAGGGAGAGACAAACCTGCCGGACGGTAAATGCTTCCCGCTCGAGTGTAACTGCGATCTG]

[+] EMBL BX608592             [TCGCTAGGTAAGCATTTCTAAACCCCGTACCGTGCGCTGTCTTTAGCTGCGCGCACTGAAACATTCTTTCGGTAGACGCAGACACAATGCTGCTCACAAGGTGTGGTACATCCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCCGGCTGCGTTTCCAGCCCTGGCAGTGAAACCCGCAACCCGATGGTTACATCAAACCAGCCCATCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCG GCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGGAGGGTCGGTTACACGTGTTCAAAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTACCGACGAGCAGGAGCCGAATGAATGCAAAACGCGACTGAAGCGTATCTTCCCGGAGGCGGAGACGGTCGCCGACTCGGCGCTACCGTACACGGCGTTCCGGTATTCGCTCGGTGTCGGCGAGGGAGAGACAAACCTGCCGGACGGTAAATGCTTCCCGCTCGAGTGTAACTGCGATCTG]
[+] EMBL CNS094OM             [                                                                gtaaTCGCTAGACGCAGACACAATGCTGCTCACAAGGTGTGGTACATCCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCCGGCTGCGTTTCCAGCCCTGGCAGTG AACCCGCAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCGCGCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGG                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS094KW             [                                                                                                   GGTGTGGTACATCCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCCGGTTGCGTTTCCAGCCCTGGCAGTGAAACCCGCAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCACTGGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCG GCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGGAGGGTCGGTTACACGTGTTCAAAGATCCTCGAC                                                                                                                                                                                                              ]
[+] EMBL AGA283274            [                                                                                                               CCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCAGGCTGCGTTTCCAGCCCTGGCAGTGAAACCCGCGACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCG GCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGGAGGGTCGGTTACACGTGTTC AAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTACCGACGAGCAGGAGCCGAATGAATGCAAAACGCGACTGAAGCGTATCTTTCCGGAGGCGGAGACGGTtc                                                                                                              ]
[+] EMBL AGA283104            [                                                                                                                                                                                                     CAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_6951#1 TCGCTAGGTAAGCATTTCTAAACCCCGTACCGTGCGCTGTCTTTAGCTGCGCGCACTGAA ACATTCTTTCGGTAGACGCAGACACAATGCTGCTCACAAGGTGTGGTACATCCGCCACCG CCATCCACACCGTTCGCCAGCGATGGCCGGCTGCGTTTCCAGCCCTGGCAGTGAAACCCG CAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGC CGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGA TGACGAACGATATGCGACACCTCGAGCACAGCAGCACGGTGTACGCAATGTTTCTCAAGG CGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCGGCCG ACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGT ACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCT TCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGG AGGGTCGGTTACACGTGTTCAAAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTA CCGACGAGCAGGAGCCGAATGAATGCAAAACGCGACTGAAGCGTATCTTCCCGGAGGCGG AGACGGTCGCCGACTCGGCGCTACCGTACACGGCGTTCCGGTATTCGCTCGGTGTCGGCG AGGGAGAGACAAACCTGCCGGACGGTAAATGCTTCCCGCTCGAGTGTAACTGCGATCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6951#0      --CTCATGCCANATTGCCCAGGTTTTTGTCTGGACACAACATG-----ACGCGGACNGAT 53
consensus_6951#1      TCGCTAGGTAAGCATTTCTAAACCCCGTACCGTGCGCTGTCTTTAGCTGCGCGCACTGAA 60
                           * *  *   *  * *         * *  * *    *       **** ** ** 

consensus_6951#0      AG---TNATCGCTAGACGCAGACACAAATGCTGCTCACAAGGTGTGGTACATCCTGCACC 110
consensus_6951#1      ACATTCTTTCGGTAGACGCAGACACAA-TGCTGCTCACAAGGTGTGGTACATCCGCCACC 119
                      *       *** *************** **************************  ****

consensus_6951#0      GCATACCACACCGTATACGCAGCGATAGGCGGCTGCTGTATTACCAGCC-TGGCAGTGAA 169
consensus_6951#1      GCCATCCACACCGTTCGC-CAGCGATGGCCGGCTGC---GTTTCCAGCCCTGGCAGTGAA 175
                      **   *********   * ******* * *******    ** ****** **********

consensus_6951#0      ACCCTGCAACCGATGGTTACATACAAACAGACCAGCGCACAGAACCCTTACACTGATAGC 229
consensus_6951#1      ACCCGCAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCAC---GATAGC 232
                      ****   * *************  ** *** ***********  ** * **   ******

consensus_6951#0      TGCCCCTGCTGGAGCGTAACGATTTGTGCGCGTACNAGGATCCTGACGACGGTCAGNTAT 289
consensus_6951#1      -GCCCCTGCCGGAGCGTAA--GTTTGTGCGCGTACAAGGATCC-GACG-CGGTCAGCT-T 286
                       ******** *********   ************* ******* **** ******* * *

consensus_6951#0      TACTGAGTGGNACTTGATTGACAGAAACGCATCATTGCTAGCNACCTACAGAGACACAA- 348
consensus_6951#1      TCTGCAGGGACTGATGACGAAC-GATATGCGACACCTCGAGCA-----CAGCAGCACGGT 340
                      *    ** *     ***   ** ** * **  **   * ***      ***   ***   

consensus_6951#0      GCAAGCNACGGTGTTAACTGCGACATGTATTACTCCAAAGTGCGGANATAGGGGCGCTGT 408
consensus_6951#1      GTACGCAATGTTTCTCAAGGCGA-ATGGGCGCGTTTTCTGTGATACAATCAT--CTACAA 397
                      * * ** * * *  * *  **** ***      *     ***     **     *     

consensus_6951#0      ATANTACATGGTTGCATNNCACAAATCATACTAACCACAGCGAGNCCCGGTGGGCTTGGG 468
consensus_6951#1      GCGGCCCGGGGCTGAACCGGCCGAC---TATTTGCTCGAGTGCGATGCGGCCGTTGCGCC 454
                            *  ** ** *     * *    ** *  *   ** * *   ***  *    *  

consensus_6951#0      AACACCCGGNGGCCCGGANGCTAAAATATATCTGGCATACCGANAGAGTTGCCGCAATTN 528
consensus_6951#1      GCGGCTCGAGAA-----ACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGG-A 508
                          * **         *  **  **  * *   *  * *  *   ** *** *      

consensus_6951#0      GCNGATGGNCACCGGTGTNGGACAGGCCCCNGACAGTGGACACTTNCAGAANGGAACAGA 588
consensus_6951#1      GCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGG-AAGAGG 567
                      ** *   * ****      *    **** *   **  *    * * *** * * ** ** 

consensus_6951#0      ACGCACACCTTNATTNGGAACCAGCCTATGTTAACCCGGAGACTTTGNCTCCAATACAGG 648
consensus_6951#1      AGATGCCGGCTGCAAGCGATCTCGCCTGT------CCGGAGGGTCGGTTACACGTGTTCA 621
                      *    *    *      ** *  **** *      ******  *  *   *   *     

consensus_6951#0      CAAATG-TGGGTAGGCGAAGCA-GGTTA-CGAGGAAAGGCCAA-GAGAAGCGGCAGNNCA 704
consensus_6951#1      AAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTACCGACGAGCAGGAGCCGAATG 681
                       * **  * *   * **  **  ** ** ** *      ** * *** **  ** *    

consensus_6951#0      AACCCCGACTAAAACCAAGGNGAGACAANTGGAATTGCGAGAGAGCCCCCGAAACACNTN 764
consensus_6951#1      AATGCAAAACGCGACTGAAGCGTATCTTCCCGGAGGCGGAGACGGTCGCCGACTCG-GCG 740
                      **  *  *     **  * * *   *     * *    ****  * * ****  *     

consensus_6951#0      TTACCAACACGCGANACAGAGGCACCCGATCTGGCACAAACGATGANAATGGGCAACAAG 824
consensus_6951#1      CTACCG-TACACGGCGTTCCGGTATTCGCTC-GGTGTCGGCGAGGGAGAGACAAACCTGC 798
                       ****   ** **       ** *  ** ** **      *** *   *     * *   

consensus_6951#0      CAATGGAGGAAGAATTTAAGGNCACATGGAGGGATTATGGNACANCAGNACAGACGAGAT 884
consensus_6951#1      CGGACGGTAAATGCTTCCCGCTCGAGTGTAACTGCGATCTG------------------- 839
                      *    *   **   **   *  *   ** *      **                      

consensus_6951#0      ACAACTACCCGAGCCCCTTTGGGNTACACACCCGGNNGGCNAGAGNGAGTATCCNCACGG 944
consensus_6951#1      ------------------------------------------------------------
                                                                                  

consensus_6951#0      NGTCAGACACTAGCAACCAGGTTTAAGATTAATAGCCNACAACAAGGGAACTTTTCCCCC 1004
consensus_6951#1      ------------------------------------------------------------
                                                                                  

consensus_6951#0      TTACCAGCTNGCAACATTATGCCANCCAACAG 1036
consensus_6951#1      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)