These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_697#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 666 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGAACTGTGTGACCATTGCGAACAGGGCAAAACCCCTGTTGCTAGAAATACCCAAGATCAGGTTTTTTCTTAAAAACTGCTCGAAAGCGTGCGAAGGTGCTAATCTCGTATTTAAAGGAACCTCTGGCAGTCTGCCGGTAACCGTAGCTACCGTCAGTTGTTTGCGGGATCATATTGATTTTGTCGATCTTCAATATACTTCACAATGGGCGAGCTTCGATGCCATTCCACAGTGTATCGTGCCATAGCAGTGGTGTGTTGTCTGGTTGGAGCTTCCGGCTACCTCTTTCCCGAGAGAGCATCTGAGCTTGAAGCGTTAGATAAGCTCGTACCAAATGTGGAACGCAGTGTTAAAGATTGTCCATACACCATCTACCAGCACGGAGGATTCGCTTTGGCCAGCTCAATATTCGTCGATCGTTACGTTGACAAAACGTACAGCCACACGGTACGAGTACAGTACGGAGAGGTGACTTGTGTCGGCCTGATCGTGGACGAATCGCACGTTCTAACTACGGCGGACTGTACGTCGTCGGAGGAGGGCACGCTGCCAGAGATTAAACTTACCAATGAAACACTGCCCTTGATTAGCGCGATCGAACAGTTTCCTCACCCCGAGTATAATGTAACGCTGCTTCGG] [+] EMBL BM619472 [CCGCCCACGCGTCCGCCCACGCGTCCGGAACTGTGTGACCATTGCGAACAGGGCAAAACCCCTGTTGCTAGAAATACCCAAGATCAGGTTTTTTCTTAAAAACTGCTCGAAAGCGTGCGAAGGTGCTAATCTCGTATTTAAAGGAACCTCTGGCAGTCTGCCGGTAACCGTAGCTACCGTCAGTTGTTTGCGGGATCATATTGATTTTGTCGATCTTCAATATACTTCACAATGGGCGAGCTTCGATGCCATTCCACAGTGTATCGTGCCATAGCAGTGGTGTGTTGTCTGGTTGGAGCTTCCGGCTACCTCTTTCCCGAGAGAGCATCTGAGCTTGAAGCGTTAGATAAGCTCGTACCAAATGTGGAACGCAGTGTTAAAGATTGTCCATACACCATCTACCAGCACGGAGGATTCGCTTTGGCCAGCTCAATATTCGTCGATCGTTACGTTGACAAAACGTACAGCCACACGGTACGAGTACAGTACGGAGAGGTGACTTGTGTCGGCCTGATCGTGGACGAATCGCACGTTCTAACTACGGCGGACTGTACGTCGTCGGAGGAGGGCACGCTGCCAGAGATTAAACTTACCAATGAAACACTGCCCTTGATTAGCGCGATCGAACAGTTTCCTCACCCCGAGTATAATGTAACGCTGCTTCGG] consensusID : consensus_697#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence [CCGCCCACGCGTCCGGCTCGTCTCGCGGCAATGTGGTGGTGAACTGTGTGACCACAGCGAACAGGGCAAAACCCCTGTTGCTAAAAATACCCAAGATCAGGTTTTTTCTTAAAAACTGCTCGAAAGCGTGCGAAGGTGCTAATCTCGTATTTAAAGGAACCTCTGGCAGTCTGCCGGTAACCGTAGCTACCGTCAGTTGTTTGCGGGATCATATTGATTTTGTCGATCTTGAATATACTTCACAATGGGCGAGCTTCGATGCCATTCCACAGTGTATCGTGCCATAGCAGTGGTGTGTTGTCTGGTTGGAGCTTCCGGCTACCTCTTTCCCGGAGAGCATCTGAGCTTGAAGCGTTAGATAAGCTCGTACCAAATGTGGAACGCAGTGTTAAAGATTGTCCATACACCATCTACCAGCACGGAGGATTCGCTTTGGCCAGCTCAATATTCGTCGATCGTTACGTTGACAAAACGTACAGCCACACGGTACGAGTACAGT] [+] EMBL BM647981 [CCGCCCACGCGTCCGGCTCGTCTCGCGGCAATGTGGTGGTGAACTGTGTGACCACAGCGAACAGGGCAAAACCCCTGTTGCTAAAAATACCCAAGATCAGGTTTTTTCTTAAAAACTGCTCGAAAGCGTGCGAAGGTGCTAATCTCGTATTTAAAGGAACCTCTGGCAGTCTGCCGGTAACCGTAGCTACCGTCAGTTGTTTGCGGGATCATATTGATTTTGTCGATCTTGAATATACTTCACAATGGGCGAGCTTCGATGCCATTCCACAGTGTATCGTGCCATAGCAGTGGTGTGTTGTCTGGTTGGAGCTTCCGGCTACCTCTTTCCCGGAGAGCATCTGAGCTTGAAGCGTTAGATAAGCTCGTACCAAATGTGGAACGCAGTGTTAAAGATTGTCCATACACCATCTACCAGCACGGAGGATTCGCTTTGGCCAGCTCAATATTCGTCGATCGTTACGTTGACAAAACGTACAGCCACACGGTACGAGTACAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_697#0 CCGCCCACGCGTCCGCC----CACGCGTCCG---------GAACTGTGTGACCATTGCGA 47 consensus_697#1 CCGCCCACGCGTCCGGCTCGTCTCGCGGCAATGTGGTGGTGAACTGTGTGACCACAGCGA 60 *************** * * **** * ************** **** consensus_697#0 ACAGGGCAAAACCCCTGTTGCTAGAAATACCCAAGATCAGGTTTTTTCTTAAAAACTGCT 107 consensus_697#1 ACAGGGCAAAACCCCTGTTGCTAAAAATACCCAAGATCAGGTTTTTTCTTAAAAACTGCT 120 *********************** ************************************ consensus_697#0 CGAAAGCGTGCGAAGGTGCTAATCTCGTATTTAAAGGAACCTCTGGCAGTCTGCCGGTAA 167 consensus_697#1 CGAAAGCGTGCGAAGGTGCTAATCTCGTATTTAAAGGAACCTCTGGCAGTCTGCCGGTAA 180 ************************************************************ consensus_697#0 CCGTAGCTACCGTCAGTTGTTTGCGGGATCATATTGATTTTGTCGATCTTCAATATACTT 227 consensus_697#1 CCGTAGCTACCGTCAGTTGTTTGCGGGATCATATTGATTTTGTCGATCTTGAATATACTT 240 ************************************************** ********* consensus_697#0 CACAATGGGCGAGCTTCGATGCCATTCCACAGTGTATCGTGCCATAGCAGTGGTGTGTTG 287 consensus_697#1 CACAATGGGCGAGCTTCGATGCCATTCCACAGTGTATCGTGCCATAGCAGTGGTGTGTTG 300 ************************************************************ consensus_697#0 TCTGGTTGGAGCTTCCGGCTACCTCTTTCCCGAGAGAGCATCTGAGCTTGAAGCGTTAGA 347 consensus_697#1 TCTGGTTGGAGCTTCCGGCTACCTCTTTCCCG-GAGAGCATCTGAGCTTGAAGCGTTAGA 359 ******************************** *************************** consensus_697#0 TAAGCTCGTACCAAATGTGGAACGCAGTGTTAAAGATTGTCCATACACCATCTACCAGCA 407 consensus_697#1 TAAGCTCGTACCAAATGTGGAACGCAGTGTTAAAGATTGTCCATACACCATCTACCAGCA 419 ************************************************************ consensus_697#0 CGGAGGATTCGCTTTGGCCAGCTCAATATTCGTCGATCGTTACGTTGACAAAACGTACAG 467 consensus_697#1 CGGAGGATTCGCTTTGGCCAGCTCAATATTCGTCGATCGTTACGTTGACAAAACGTACAG 479 ************************************************************ consensus_697#0 CCACACGGTACGAGTACAGTACGGAGAGGTGACTTGTGTCGGCCTGATCGTGGACGAATC 527 consensus_697#1 CCACACGGTACGAGTACAGT---------------------------------------- 499 ******************** consensus_697#0 GCACGTTCTAACTACGGCGGACTGTACGTCGTCGGAGGAGGGCACGCTGCCAGAGATTAA 587 consensus_697#1 ------------------------------------------------------------ consensus_697#0 ACTTACCAATGAAACACTGCCCTTGATTAGCGCGATCGAACAGTTTCCTCACCCCGAGTA 647 consensus_697#1 ------------------------------------------------------------ consensus_697#0 TAATGTAACGCTGCTTCGG 666 consensus_697#1 ------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||