Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 6998 cluster # 6998       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6998#0 length = 1260 sequences # 4  
consensus_6998#1 length = 782 sequences # 1  
consensus_6998#2 length = 542 sequences # 1  

consensusID : consensus_6998#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1260
fasta sequence
                              [TTTTTTTTTTTTTTTCACTGTTATAACATTGTATTTGACAACTTCTCTCAAACACTCCCATCAAGAGAAGACAATTCTGGTGTACCCTAAAATATGGCCGAAAACAACACGTACGCGACCGACCACACTGTAGCTAAATAGTGGATAATTTAGTTTAGTAAAATTATACGTCCAAAACGCTTTAAACCGAAACACTACACTATATCTCTTTGCTCTACGCTCTAAATTGCAGTCCGATACAAGATTCTATCTACGACGATCCTTCCGAAGTTTAAAAAAAAAGAGGGACTACATCATCGTCTTTGCGCTACTGCTATGATTCGTACTGCTTCGTTACGTTCCACAGCAAACACTCGAGAAACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACACACCTTTCGGGAGGTTCCAGCCGGACGAGGTGGATGAGGATGCCGCGCCGTGCTGCGGCTGGGCATGACCAGCGGGCAACAGTTTGTGCGGCAGGTCGGCCATCGGCCAGC-GGAAGCTAACGCTCGGCGCACCGATGCATCCAATCCAGTTGAAGTGCACCAGCAGCACGTTCGCTTCGATTAGACCGTCGTCCCCGGTGCGATGGAAGCACTTCTTCAGACAGAACCGCTCCATTTGTCTGTGAAGAGAAGTGTAGAAACATATGATCAATCGATTGGATTTGCAAAAGCAAACACAGAATGGAATGTCAACACTTACGCATCGTAGTGCAGCACCGCATCGTTGTTGCGCATGATCGTGAGCAGCCGGTTAACGACCTCGAAGACACGCTCCAGCTGCTCGTTAAACCGGTGCCACAGACCCATCAGATCGCCCACCGTCCGGTAGGTGGAGCGAAGGCTTGGCTCGGTCGTCCCTTCCACCAGCCGCATAAACTCGATGTGCGCCA-CAGCAGCTTCGGCGAGTGGACGTACTCCTGCTGACATTCGCGCACCTGTATCCGCTCG-AGGCGCCAGTTCTCCTGAATGCCCGCAGTTTGGAGGGTGGCAGCA-GCGGCTTTACCGCGCGGTGGCTGCAGCTGAACGCACAGGACGAAGCTGCGCAGGGTCCGGTGCCGGAACTGCAGCACGCCGGCATCCTCCTCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCTAGTTTGTTCGCGATCAGCTGCGTGATCCGGGGTACGGCCGGTAGGGAGGCACCGGTCGGTGGCCCGTCATCTCTGCGTACAAACCTCTCCCGCAAGGAAGCTGGAAGAAAATTGATAAAA]

[+] EMBL AGA281539            [TTTTTTTTTTTTTTTCACTGTTATAACATTGTATTTGACAACTTCTCTCAAACACTCCCATCAAGAGAAGACAATTCTGGTGTACCCTAAAATATGGCCGAAAACAACACGTACGCGACCGACCACACTGTAGCTAAATAGTGGATAATTTAGTTTAGTAAAATTATACGTCCAAAACGCTTTAAACCGAAACACTACACTATATCTCTTTGCTCTACGCTCTAAATTGCAGTCCGATACAAGATTCTATCTACGACGATCCTTCCGAAGTTTAAAAAAAAAGAGGGACTACATCATCGTCTTTGCGCTACTGCTATGATTCGTACTGCTTCGTTACGTTCCACAGCAAACACTCGAGAAACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACACACCTTTCGGGAGGTTCCAGCCGGACGAGGTGGATGAGGATGCCGCGCCGTGCTGCGGCTGGGCGTGACCAGCGGGCAACAGTTTGTGCGGCAGGTCGGCCATCGGCCAGC GGAAGCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08YXA             [                                                                                                         AACACGTACGCGACCGACCACACTGTAGCTAAATAGTGGATAATTTAGTTTAGTAAAATTATACGTCCAAAACGCTTTAAACCGAAACACTACACTATATCTGTTTGCTCTACGCTCTAAATTGCAGTCCGATACAAGATTCTATCCACGACGATCCTTCCGAACTTTAAACAAAAAGAGGGACTACACCATCGTCAGTGCGCTACTGCTATGATTCGTACTGCTTCGTTACGTTCCACAGCAAACACTCGAGAAACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACACACCTTTCGGGAGGTTCCAGCCGGACGAGGTGGATGAGGATGCCGCGCCGTGCTGCGGCTGGGCATGACCAGCGGGCAACAGTTTGTGCGGCAGGTCGGCCATCGG CAGC GGAAGCTAACGCTCGGCGCACCGATGCATCCAATCCAGTTGAAGTGCACCAGCAGCACGTTCGCTTCGATTAGACCGTCGTCCCCGGTGCGATGGAAGCACTTCTTCAGACAGAACCGCTCCATTTGTCTGTGAAGAGAAGTGTAGAAACATATGATCAATCGATTGGATTTGCAAAAGCAAACACAGAATGGAATGTCAACACTTACGCATCGTAGTGCAGCACCGCATCGTTGTTGCGCATGATCGTGAGCAGCCGGTTAACGACCTCGAAGACACGCTCCAGCTGCTCGTTAAACCGGTGCCACAGACCCATCAGATCGCCCACCGTCCGGTAGGTGGAGCGAAGGCTTGGCTCGGTCGTCCCTTCCACCAGCCGCATAAACTCGATGTGCGCCA CAGCAGCTTCGGCGAGTGGACGTACTCCTGCTGACATTCGCGCACCTGTATCCGCTCG AGGCGCCAGTTCTCCTGAATGCCCGCAGTTTGGAGGGTGGCAGCA GCGGCTTTACCGCGCGGTGGCTGCAGCTGAACGCACAGGACGAAGCTGCGCAGGGTCCGGTGCCGGAACTGC                                                                                                                                                                                    ]
[-] EMBL CNS08YXB             [                                                                                                                                                                                                                                                                                                                                                    CCACAGAAAAAACTCGAGAAACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACACACCTTTCGGGAGGTTCCAGCCGGACGAGGTGGATGAGGATGCCGCGCCGTGCTGCGGCTGGGCATGACCAGCGGGCAACAGTTTGTGCGGCAGGTCGGCCATCGGCCAGCGGGAAG TAACGCTCGGCGCACCGATGCATCCAATCCAGTTGAAGTGCACCAGCAGCACGTTCGCTTCGATTAGACCGTCGTCCCCGGTGCGATGGAAGCACTTCTTCAGACAGAACCGCTCCATTTGTCTGTGAAGAGAAGTGTAGAAACATATGATCAATCGATTGGATTTGCAAAAGCAAACACAGAATGGAATGTCAAAACTTACGCATCGTAGTGCAGCACCGCATCGTTGTTGCGCATGATCGTGAGCAGCCGGTTAACGACCTCGAAGACACGCTCCAGCTGCTCGTTAAACCGGTGCCACAGACCCATCAGATCGCCCACCGTCCGGTAGGTGGAGCGAAGCGTCTGCTCGGTCGTCCCTTCCACCAGCCGCATAAACTCGATGTGCGCCAGCAGCAGCTTCGGCGAGTGGACGTACTCCTGCTGACATTCGCGCACCTGTATCCGCTCG AGGCGCCAGTTCTCCTGAATGCCCGCAGTTTGGAGGGTGGCAGCA GCGGCTTTACCGCGCGGTGGCTGCAGCTGAACGCACAGGACGAAG TGCGCAGGGTCCGGTGCCGGAACTGCAGCACGCCGGCATCCTCCTCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCTAGTTTGTTCGCGATCAGCTGCGTGATCCGGGGTACGGCCGGTAGGGAGGCACCGGTCGGTGGCCCGTCATCTCTGCGTACAAACCTCTCCCGCAAGGAAGCTGGAAGAAAATTGATAAAA]
[-] EMBL AGA283131            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTATCCGCTCGAAGCCGCCAGTTCTCCTGAATGCCCGCAGTTTGGAGGGTGGCAGCAYGCGGCTTTACCGCGCGGTGGCTGCAGCTGAACGCACAGGACGYAGCTGCGCAGGGTCCGGTGCCGGAACTGCAGCACGCCGGCATCCTCCTCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCTAGTTTGTTCGCGATCAGCTGCGTGATCCGGGGTACGGCCGGTAGGGAGGCACCGGT                                                                ]


>consensus_6998#0 TTTTTTTTTTTTTTTCACTGTTATAACATTGTATTTGACAACTTCTCTCAAACACTCCCA TCAAGAGAAGACAATTCTGGTGTACCCTAAAATATGGCCGAAAACAACACGTACGCGACC GACCACACTGTAGCTAAATAGTGGATAATTTAGTTTAGTAAAATTATACGTCCAAAACGC TTTAAACCGAAACACTACACTATATCTCTTTGCTCTACGCTCTAAATTGCAGTCCGATAC AAGATTCTATCTACGACGATCCTTCCGAAGTTTAAAAAAAAAGAGGGACTACATCATCGT CTTTGCGCTACTGCTATGATTCGTACTGCTTCGTTACGTTCCACAGCAAACACTCGAGAA ACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACACACCTTTCGGGAGGTTCCAGCCGG ACGAGGTGGATGAGGATGCCGCGCCGTGCTGCGGCTGGGCATGACCAGCGGGCAACAGTT TGTGCGGCAGGTCGGCCATCGGCCAGCGGAAGCTAACGCTCGGCGCACCGATGCATCCAA TCCAGTTGAAGTGCACCAGCAGCACGTTCGCTTCGATTAGACCGTCGTCCCCGGTGCGAT GGAAGCACTTCTTCAGACAGAACCGCTCCATTTGTCTGTGAAGAGAAGTGTAGAAACATA TGATCAATCGATTGGATTTGCAAAAGCAAACACAGAATGGAATGTCAACACTTACGCATC GTAGTGCAGCACCGCATCGTTGTTGCGCATGATCGTGAGCAGCCGGTTAACGACCTCGAA GACACGCTCCAGCTGCTCGTTAAACCGGTGCCACAGACCCATCAGATCGCCCACCGTCCG GTAGGTGGAGCGAAGGCTTGGCTCGGTCGTCCCTTCCACCAGCCGCATAAACTCGATGTG CGCCACAGCAGCTTCGGCGAGTGGACGTACTCCTGCTGACATTCGCGCACCTGTATCCGC TCGAGGCGCCAGTTCTCCTGAATGCCCGCAGTTTGGAGGGTGGCAGCAGCGGCTTTACCG CGCGGTGGCTGCAGCTGAACGCACAGGACGAAGCTGCGCAGGGTCCGGTGCCGGAACTGC AGCACGCCGGCATCCTCCTCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCT AGTTTGTTCGCGATCAGCTGCGTGATCCGGGGTACGGCCGGTAGGGAGGCACCGGTCGGT GGCCCGTCATCTCTGCGTACAAACCTCTCCCGCAAGGAAGCTGGAAGAAAATTGATAAAA



consensusID : consensus_6998#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 782
fasta sequence
                              [AGATNGCCCCAGGCTTAAACACACGTACGCGACCGACCACACTGTAGCTAANTTAGTGGATAATTTAGTTTAGTAAAATTGTACGTCCAAAACGCTTTAAACCGAAACACTACACTATATCTCTATTGCTCTACGCTACTAAATTAGCAGTCCGATACAAGATTCTATCTACGACGATCCTTCCGAAGTTTAAAAAACAAAGAGGGACTACATCATCGTCTTTGCGCTACTGCTATGATTCGTACTGCTTCGTTACGTTCCACAGCAAACACTCGAGAAACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACACACCTATCTCGGGAGGTTCCAGCCGGACAGAGGTGGATGAGGATGCCGCGCCGTGCTAGCGGCTAGGGCGTGACCAGCGGAGCAACAGNNNTAGTGCGGCAGGTCGGNCCATCGGCCAGCGGAAGCTAACGCTCGGCCGCACCGATNGCATCCAATCCAGTTGAAAGTTGCACCAGACAGACACAGTATTAGCTTACGATATAGACCAGACGTACCCCCGGTGCGATGGAAGCANTTCATTCAGAACAGAACACCGGGTCCATNNNNTGTCTGTGAAAAGAGCAAATGTAGAAAAACAATATGATCAATAGGGATNGGGCATNGNACACAAAAAGGCAAAAACAAAACAAACTTGAATGGCANACACTATACGCCATNCAGTAANATNGGAAGGAACCGCATCNGATATGTATGCAGCATGATCCGTCCAGAGANACAGGGTCAAAGANCTCGCAAGACANNGGACT]

[+] EMBL AL697615             [AGATNGCCCCAGGCTTAAACACACGTACGCGACCGACCACACTGTAGCTAANTTAGTGGATAATTTAGTTTAGTAAAATTGTACGTCCAAAACGCTTTAAACCGAAACACTACACTATATCTCTATTGCTCTACGCTACTAAATTAGCAGTCCGATACAAGATTCTATCTACGACGATCCTTCCGAAGTTTAAAAAACAAAGAGGGACTACATCATCGTCTTTGCGCTACTGCTATGATTCGTACTGCTTCGTTACGTTCCACAGCAAACACTCGAGAAACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACACACCTATCTCGGGAGGTTCCAGCCGGACAGAGGTGGATGAGGATGCCGCGCCGTGCTAGCGGCTAGGGCGTGACCAGCGGAGCAACAGNNNTAGTGCGGCAGGTCGGNCCATCGGCCAGCGGAAGCTAACGCTCGGCCGCACCGATNGCATCCAATCCAGTTGAAAGTTGCACCAGACAGACACAGTATTAGCTTACGATATAGACCAGACGTACCCCCGGTGCGATGGAAGCANTTCATTCAGAACAGAACACCGGGTCCATNNNNTGTCTGTGAAAAGAGCAAATGTAGAAAAACAATATGATCAATAGGGATNGGGCATNGNACACAAAAAGGCAAAAACAAAACAAACTTGAATGGCANACACTATACGCCATNCAGTAANATNGGAAGGAACCGCATCNGATATGTATGCAGCATGATCCGTCCAGAGANACAGGGTCAAAGANCTCGCAAGACANNGGACT]


>consensus_6998#1 AGATNGCCCCAGGCTTAAACACACGTACGCGACCGACCACACTGTAGCTAANTTAGTGGA TAATTTAGTTTAGTAAAATTGTACGTCCAAAACGCTTTAAACCGAAACACTACACTATAT CTCTATTGCTCTACGCTACTAAATTAGCAGTCCGATACAAGATTCTATCTACGACGATCC TTCCGAAGTTTAAAAAACAAAGAGGGACTACATCATCGTCTTTGCGCTACTGCTATGATT CGTACTGCTTCGTTACGTTCCACAGCAAACACTCGAGAAACATGAGGCCCGCCTTGTGAT CCGTCCCGACGAACACACCTATCTCGGGAGGTTCCAGCCGGACAGAGGTGGATGAGGATG CCGCGCCGTGCTAGCGGCTAGGGCGTGACCAGCGGAGCAACAGNNNTAGTGCGGCAGGTC GGNCCATCGGCCAGCGGAAGCTAACGCTCGGCCGCACCGATNGCATCCAATCCAGTTGAA AGTTGCACCAGACAGACACAGTATTAGCTTACGATATAGACCAGACGTACCCCCGGTGCG ATGGAAGCANTTCATTCAGAACAGAACACCGGGTCCATNNNNTGTCTGTGAAAAGAGCAA ATGTAGAAAAACAATATGATCAATAGGGATNGGGCATNGNACACAAAAAGGCAAAAACAA AACAAACTTGAATGGCANACACTATACGCCATNCAGTAANATNGGAAGGAACCGCATCNG ATATGTATGCAGCATGATCCGTCCAGAGANACAGGGTCAAAGANCTCGCAAGACANNGGA CT



consensusID : consensus_6998#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 542
fasta sequence
                              [CCCCCGGTGCGATGGAAGCACTTCTTCAGACCAGAACCGCTTCCATTTTGCATCGTAGTGCAGCACCGCATCGTTGTTGCGCATGATCGTGAGCAGCCGGTTAACGACCTCGAAGACCACGCTCCAGCTGCTCGTTAAACCGGTGCCACAGACCCATCCAGATCGCCCACCGTCCGGTAGGTGGAGCGAAGCGTCTGCTCGGTCGTCTCTTCGACCAGCCGCATAAACTCGATGTGCGCCAGCAGCAGCTTCGGCGAGTGGACGTACTCCTGCTGACATTCGCGCACCTGTATCCGCTCGAGGCGCCAGTTCTCCTGAATGCCCGCAGTTTGGAGGGTGGCAGCAGCGGCTTTACCGCGCGGTGGCTGCAGCTGAACGCACAGGACGAAGCTGCGCAGGGTCCGGTGCCGGAACTGCAGCACGCCGGCATCCTCCTCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCTAGTTTGTTCGCGATCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM592092             [CCCCCGGTGCGATGGAAGCACTTCTTCAGACCAGAACCGCTTCCATTTTGCATCGTAGTGCAGCACCGCATCGTTGTTGCGCATGATCGTGAGCAGCCGGTTAACGACCTCGAAGACCACGCTCCAGCTGCTCGTTAAACCGGTGCCACAGACCCATCCAGATCGCCCACCGTCCGGTAGGTGGAGCGAAGCGTCTGCTCGGTCGTCTCTTCGACCAGCCGCATAAACTCGATGTGCGCCAGCAGCAGCTTCGGCGAGTGGACGTACTCCTGCTGACATTCGCGCACCTGTATCCGCTCGAGGCGCCAGTTCTCCTGAATGCCCGCAGTTTGGAGGGTGGCAGCAGCGGCTTTACCGCGCGGTGGCTGCAGCTGAACGCACAGGACGAAGCTGCGCAGGGTCCGGTGCCGGAACTGCAGCACGCCGGCATCCTCCTCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCTAGTTTGTTCGCGATCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG]


>consensus_6998#2 CCCCCGGTGCGATGGAAGCACTTCTTCAGACCAGAACCGCTTCCATTTTGCATCGTAGTG CAGCACCGCATCGTTGTTGCGCATGATCGTGAGCAGCCGGTTAACGACCTCGAAGACCAC GCTCCAGCTGCTCGTTAAACCGGTGCCACAGACCCATCCAGATCGCCCACCGTCCGGTAG GTGGAGCGAAGCGTCTGCTCGGTCGTCTCTTCGACCAGCCGCATAAACTCGATGTGCGCC AGCAGCAGCTTCGGCGAGTGGACGTACTCCTGCTGACATTCGCGCACCTGTATCCGCTCG AGGCGCCAGTTCTCCTGAATGCCCGCAGTTTGGAGGGTGGCAGCAGCGGCTTTACCGCGC GGTGGCTGCAGCTGAACGCACAGGACGAAGCTGCGCAGGGTCCGGTGCCGGAACTGCAGC ACGCCGGCATCCTCCTCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCTAGT TTGTTCGCGATCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGC GG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6998#0      TTTTTTTTTTTTTTTCACTGTTATAACATTGTATTTGACAACTTCTCTCAAACACTCCCA 60
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      ------------------------------------------------------------
                                                                                  

consensus_6998#0      TCAAGAGAAGACAATTCTGGTGTACCCTAAAATATGGCCGAAAACAACACGTACGCGACC 120
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      ------------------------------------------------------------
                                                                                  

consensus_6998#0      GACCACACTGTAGCTAAATAGTGGATAATTTAGTTTAGTAAAATTATACGTCCAAAACGC 180
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      ------------------------------------------------------------
                                                                                  

consensus_6998#0      TTTAAACCGAAACACTACACTATATCTCTTTGCTCTACGCTCTAAATTGCAGTCCGATAC 240
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      ------------------------------------------------------------
                                                                                  

consensus_6998#0      AAGATTCTATCTACGACGATCCTTCCGAAGTTTAAAAAAAAAGAGGGACTACATCATCGT 300
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      ------------------------------------------------------------
                                                                                  

consensus_6998#0      CTTTGCGCTACTGCTATGATTCGTACTGCTTCGTTACGTTCCACAGCAAACACTCGAGAA 360
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      ------------------------------------------------------------
                                                                                  

consensus_6998#0      ACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACACACCTTTCGGGAGGTTCCAGCCGG 420
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      ------------------------------------------------------------
                                                                                  

consensus_6998#0      ACGAGGTGGATGAGGATGCCGCGCCGTGCTGCGGCTGGGCATGACCAGCGGGCAACAGTT 480
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      ------------------------------------------------------------
                                                                                  

consensus_6998#0      TGTGCGGCAGGTCGGCCATCGGCCAGCGGAAGCTAACGCTCGGCGCACCGATGCATCCAA 540
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      -----------------------------------------AGATNGCCCCAGGCTTAAA 19
                                                                                  

consensus_6998#0      TCCAGTTGAAGTGCACCAGCAGCACGTTCGCTTCGATTAGACCGTCGTCCCCGGTGCGAT 600
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      CACACGTACGCGACCGACCACACTGTAGCTAANTTAGTGGATAATTTAGTTTAGTAAAAT 79
                                                                                  

consensus_6998#0      GGAAGCACTTCTTCAGACAGAACCGCTCCATTTGTCTGTGAAGAGAAGTGTAGAAACATA 660
consensus_6998#2      ------------------------------------------------------------
consensus_6998#1      TGTACGTCCAAAACGCTTTAAACCGAAACACTACACTATATCTCTATTGCTCTACGCTAC 139
                                                                                  

consensus_6998#0      TGATCAATCGATTGGATTTGCAAAAGCAAACACAGAATGGAATGTCAACACTTACGCATC 720
consensus_6998#2      ----CCCCCGGTGCGA--TGGAAGCACTTCTTCAGACCAGAACCGCTTCCATTTTGCATC 54
consensus_6998#1      TAAATTAGCAGTCCGA--TACAAGATTCTATCTACGAC-GATCCTTCCGAAGTTTAAAAA 196
                              *  *  **  *  **          *     **           *    *  

consensus_6998#0      GTAGTGCAGCACCGCATCGTTGT---TGCGC-ATGATCGTGAGCAG--CCGGTTAACGAC 774
consensus_6998#2      GTAGTGCAGCACCGCATCGTTGT---TGCGC-ATGATCGTGAGCAG--CCGGTTAACGAC 108
consensus_6998#1      ACAAAGAGGGACTACATCATCGTCTTTGCGCTACTGCTATGATTCGTACTGCTTCGTTAC 256
                        *  *  * **  **** * **   ***** *      ***   *  * * **    **

consensus_6998#0      CT--CGAAGAC-ACGCTCCAG-----------CTGCTCGTTAAACCGGTGCCACAGACCC 820
consensus_6998#2      CT--CGAAGACCACGCTCCAG-----------CTGCTCGTTAAACCGGTGCCACAGACCC 155
consensus_6998#1      GTTCCACAGCAAACACTCGAGAAACATGAGGCCCGCCTTGTGATCCGTCCCGACGAACAC 316
                       *  *  **   ** *** **           * **    * * ***   * **  ** *

consensus_6998#0      ATC-AGATCGCCCACCGTCCGGTAGGTGGAGC--GAAGGCTTGGCTCGGTCGTCCCTTCC 877
consensus_6998#2      ATCCAGATCGCCCACCGTCCGGTAGGTGGAGC--GAAGCGTCTGCTCGGTCGTCTCTTCG 213
consensus_6998#1      ACCTATCTCGGGAGGTTCCAGCCGGACAGAGGTGGATGAGGATGCCGCGCCGTGCTAGCG 376
                      * * *  ***        * *   *   ***   ** *     **   * ***     * 

consensus_6998#0      ACCAGCCGCATAAACTCGATGTGCGCCA-CAGCAGCTTCGGCGAGTGGACGTACTCCT-- 934
consensus_6998#2      ACCAGCCGCATAAACTCGATGTGCGCCAGCAGCAGCTTCGGCGAGTGGACGTACTCCT-- 271
consensus_6998#1      GCTAGG-GCGTGA-CCAGCGGAGCAACAGNNNTAG-TGCGGCAGGTCGGNCCATCGGCCA 433
                       * **  ** * * *  *  * **  **     ** * ****  ** *    *       

consensus_6998#0      ------GCTGACATTCG--CGCACC---TGTATCCGCTCGAGGCGCCAGTTCTCCTGAAT 983
consensus_6998#2      ------GCTGACATTCG--CGCACC---TGTATCCGCTCGAGGCGCCAGTTCTCCTGAAT 320
consensus_6998#1      GCGGAAGCTAACGCTCGGCCGCACCGATNGCATCCAATCCAGTTGAAAGTTGCACCAGAC 493
                            *** **  ***  ******    * ****  ** **  *  ****   *   * 

consensus_6998#0      GCCCGCAGT-TTGGAGGGTGGCA-GCAGCGGCTTTACC----GCGCGGTGGCTGCAGCTG 1037
consensus_6998#2      GCCCGCAGT-TTGGAGGGTGGCA-GCAGCGGCTTTACC----GCGCGGTGGCTGCAGCTG 374
consensus_6998#1      AGACACAGTATTAGCTTACGATATAGACCAGACGTACCCCCGGTGCGATGGAAGCANTTC 553
                         * **** ** *     *  *   * * *   ****    * *** ***  ***  * 

consensus_6998#0      AAC--GCACAGGAC---GAAGCTGCGCAGGGTCCGGTGCCGGAAC---TGCAGCACGCCG 1089
consensus_6998#2      AAC--GCACAGGAC---GAAGCTGCGCAGGGTCCGGTGCCGGAAC---TGCAGCACGCCG 426
consensus_6998#1      ATTCAGAACAGAACACCGGGTCCATNNNNTGTCTGTGAAAAGAGCAAATGTAGAAAAACA 613
                      *    * **** **   *   *        *** *      ** *   ** ** *   * 

consensus_6998#0      GCATCCTCC-TCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCTAGTTTGTT 1148
consensus_6998#2      GCATCCTCC-TCCGAACAGTCCAGCGTCCAGCGGGTGTCGCAGTCGGTGGCTAGTTTGTT 485
consensus_6998#1      ATATGATCAATAGGGATNGGGCATNGNACACAAAAAGGCAAAAACAAAACAAACTTGAAT 673
                        **  **  *  * *  *  **  *  **      * *  *  *       * **   *

consensus_6998#0      CGCGATCAG-CTGCGTGA-TCCGGGGTACGGCCGGTAGGGAGGCACCGGTCGGTGGCCCG 1206
consensus_6998#2      CGCGATCGG-ACGCGTGG-GCGGACGCGTGGGCGGACGCGTGG-GCGGACGCGTGGGCGG 542
consensus_6998#1      GGCANACACTATACGCCATNCAGTAANATNGGAAGGAAC-CGCATCNGATATGTATGCAG 732
                       **   *      **     * *       *   *      *   * *    **   * *

consensus_6998#0      TCATCTCTGCGTACAAACCTCTCCCGCAAGGAAGCTGGAAGAAAATTGATAAAA 1260
consensus_6998#2      ------------------------------------------------------
consensus_6998#1      CATGATCCGTCCAGAGANACAGGGTCAAAGANCTCGCAAGACANNGGACT---- 782
                                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)