These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence [CCGCCTTCTTCTACATTGTGGCGGGCATAGATGGCGATAGATGTGATGGGAATTATAACAGAACTATAAATATATACATATACATATAGACATGCATACAAAATACATGTATTTACAATAAAAAGCTCTACATGTCCAAACGCTTACAACACAGAGATCACTGAATGAATTGGCAAAAAATGAGGGGGCGGGAAGGTGGTGGTAGTAGGGGCAGAAATAGGTAGGGTTATCAATTCATATTCGAGATATGCACATGACGCCATGCGTGTTTCAAAGGACTACTAACACTAAGACTTTTTGCCCTCATATCTTACAGCTTGATAAGCTTCATCATCGTTGTTGAACGTGTTTATTGTGTCAGTTTCCATCTTTTGCTTTGGTGCGATTCCTTAAGGAATCGGCGAACGCCACGACAGAGGTGTTTGTTGGGTAGAGTAAGGGATGAAACACTGATGCCGCCACACAGTGAATGCTAAAGCAACAGTCGTCATCCATTGCACTACTTTTTTCCAATTGCTACTCAAAGCGTAATGTATTTGTGTACATATAAACATATATATACA] [+] EMBL BM632480 [CCGCCTTCTTCTACATTGTGGCGGGCATAGATGGCGATAGATGTGATGGGAATTATAACAGAACTATAAATATATACATATACATATAGACATGCATACAAAATACATGTATTTACAATAAAAAGCTCTACATGTCCAAACGCTTACAACACAGAGATCACTGAATGAATTGGCAAAAAATGAGGGGGCGGGAAGGTGGTGGTAGTAGGGGCAGAAATAGGTAGGGTTATCAATTCATATTCGAGATATGCACATGACGCCATGCGTGTTTCAAAGGACTACTAACACTAAGACTTTTTGCCCTCATATCTTACAGCTTGATAAGCTTCATCATCGTTGTTGAACGTGTTTATTGTGTCAGTTTCCATCTTTTGCTTTGGTGCGATTCCTTAAGGAATCGGCGAACGCCACGACAGAGGTGTTTGTTGGGTAGAGTAAGGGATGAAACACTGATGCCGCCACACAGTGAATGCTAAAGCAACAGTCGTCATCCATTGCACTACTTTTTTCCAATTGCTACTCAAAGCGTAATGTATTTGTGTACATATAAACATATATATACA] consensusID : consensus_7#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 270 fasta sequence [AGAATCGGCACGAGGGTCTATTCCTTAAGGAATCGGCGAACGCCACGACAGAGGTGTTTGTTGGGTAGACGTAAGGGATGAAACACTGATGCCGCCACACAGTGAATGCTAAAGCAACAGTCGGTCATCCATTGCACTACTTTTTTCCAATTGCTACTCAAAGCGTAATGTATTTGTGTTTCTGACTGTCGGTCGGACACAGCTGTGAAGAACTACGCGGCAAATGTTATGACTTCTGTAGGGCGCGCATATTAATGGTTTAGTAGCATT] [+] EMBL BX469306 [AGAATCGGCACGAGGGTCTATTCCTTAAGGAATCGGCGAACGCCACGACAGAGGTGTTTGTTGGGTAGACGTAAGGGATGAAACACTGATGCCGCCACACAGTGAATGCTAAAGCAACAGTCGGTCATCCATTGCACTACTTTTTTCCAATTGCTACTCAAAGCGTAATGTATTTGTGTTTCTGACTGTCGGTCGGACACAGCTGTGAAGAACTACGCGGCAAATGTTATGACTTCTGTAGGGCGCGCATATTAATGGTTTAGTAGCATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7#0 CCGCCTTCTTCTACATTGTGGCGGGCATAGATGGCGATAGATGTGATGGGAATTATAACA 60 consensus_7#1 ------------------------------------------------------------ consensus_7#0 GAACTATAAATATATACATATACATATAGACATGCATACAAAATACATGTATTTACAATA 120 consensus_7#1 ------------------------------------------------------------ consensus_7#0 AAAAGCTCTACATGTCCAAACGCTTACAACACAGAGATCACTGAATGAATTGGCAAAAAA 180 consensus_7#1 ------------------------------------------------------------ consensus_7#0 TGAGGGGGCGGGAAGGTGGTGGTAGTAGGGGCAGAAATAGGTAGGGTTATCAATTCATAT 240 consensus_7#1 ------------------------------------------------------------ consensus_7#0 TCGAGATATGCACATGACGCCATGCGTGTTTCAAAGGACTACTAACACTAAGACTTTTTG 300 consensus_7#1 ------------------------------------------------------------ consensus_7#0 CCCTCATATCTTACAGCTTGATAAGCTTCATCATCGTTGTTGAACGTGTTTATTGTGTCA 360 consensus_7#1 ------------------------------------------------------------ consensus_7#0 GTTTCCATCTTTTGCTTTGGTG-CGATTCCTTAAGGAATCGGCGAACGCCACGACAGAGG 419 consensus_7#1 ------AGAATCGGCACGAGGGTCTATTCCTTAAGGAATCGGCGAACGCCACGACAGAGG 54 * * ** * * * *********************************** consensus_7#0 TGTTTGTTGGGTAGA-GTAAGGGATGAAACACTGATGCCGCCACACAGTGAATGCTAAAG 478 consensus_7#1 TGTTTGTTGGGTAGACGTAAGGGATGAAACACTGATGCCGCCACACAGTGAATGCTAAAG 114 *************** ******************************************** consensus_7#0 CAACAGTCG-TCATCCATTGCACTACTTTTTTCCAATTGCTACTCAAAGCGTAATGTATT 537 consensus_7#1 CAACAGTCGGTCATCCATTGCACTACTTTTTTCCAATTGCTACTCAAAGCGTAATGTATT 174 ********* ************************************************** consensus_7#0 TGTGTACAT-ATAAACATATATATACA--------------------------------- 563 consensus_7#1 TGTGTTTCTGACTGTCGGTCGGACACAGCTGTGAAGAACTACGCGGCAAATGTTATGACT 234 ***** * * * * *** consensus_7#0 ------------------------------------ consensus_7#1 TCTGTAGGGCGCGCATATTAATGGTTTAGTAGCATT 270 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||