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These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 702 cluster # 702       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_702#0 length = 405 sequences # 1  
consensus_702#1 length = 236 sequences # 1  

consensusID : consensus_702#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 405
fasta sequence
                              [GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGCCCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTCGCTCTGTTTGCGCTGCAAGCGTTCCTGGGCGTGCTGCCCATGCTGTTCTATCTGGCCGGGCTGGTCGAGCTGGCGGGTGAGCAGGTGCAGTCACCCGAACGGGTCGCCACACTGCTGGTGGCACTGTTTACCCTTGCCGTACCGGTCAGCCGCTATCTGCACGCGAGTCGGCTCCAGCAGCGGCCCGTCCTGGTGCTCAGCGCGATGCTCATCGCGCTGGCCACGCTTGCGCTCGGCTGGCACTGTCACGAGCGACGAAACCGCAGCCTGGACCTAGCGGAGCTC]

[+] EMBL AGA280751            [GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGCCCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTCGCTCTGTTTGCGCTGCAAGCGTTCCTGGGCGTGCTGCCCATGCTGTTCTATCTGGCCGGGCTGGTCGAGCTGGCGGGTGAGCAGGTGCAGTCACCCGAACGGGTCGCCACACTGCTGGTGGCACTGTTTACCCTTGCCGTACCGGTCAGCCGCTATCTGCACGCGAGTCGGCTCCAGCAGCGGCCCGTCCTGGTGCTCAGCGCGATGCTCATCGCGCTGGCCACGCTTGCGCTCGGCTGGCACTGTCACGAGCGACGAAACCGCAGCCTGGACCTAGCGGAGCTC]


>consensus_702#0 GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGC CCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTC GCTCTGTTTGCGCTGCAAGCGTTCCTGGGCGTGCTGCCCATGCTGTTCTATCTGGCCGGG CTGGTCGAGCTGGCGGGTGAGCAGGTGCAGTCACCCGAACGGGTCGCCACACTGCTGGTG GCACTGTTTACCCTTGCCGTACCGGTCAGCCGCTATCTGCACGCGAGTCGGCTCCAGCAG CGGCCCGTCCTGGTGCTCAGCGCGATGCTCATCGCGCTGGCCACGCTTGCGCTCGGCTGG CACTGTCACGAGCGACGAAACCGCAGCCTGGACCTAGCGGAGCTC



consensusID : consensus_702#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence
                              [GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGCCCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTCGCTCTGCTGATAACGGTGTCCGGCCTGTCAGCAAACTCTAGAAGGAGGGCCGAAAAAGCGGCTTCTACTCTTACTCTTGCTGGGCAAGCCTTTTTTTTGTTGTTGGCTGGCGTGTG]

[+] EMBL AGA283391            [GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGCCCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTCGCTCTGCTGATAACGGTGTCCGGCCTGTCAGCAAACTCTAGAAGGAGGGCCGAAAAAGCGGCTTCTACTCTTACTCTTGCTGGGCAAGCCTTTTTTTTGTTGTTGGCTGGCGTGTG]


>consensus_702#1 GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGC CCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTC GCTCTGCTGATAACGGTGTCCGGCCTGTCAGCAAACTCTAGAAGGAGGGCCGAAAAAGCG GCTTCTACTCTTACTCTTGCTGGGCAAGCCTTTTTTTTGTTGTTGGCTGGCGTGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_702#0      GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGC 60
consensus_702#1      GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGC 60
                     ************************************************************

consensus_702#0      CCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTC 120
consensus_702#1      CCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTC 120
                     ************************************************************

consensus_702#0      GCTCTGTTTGCGCTGCAAGCGTTCCTGGGCGTGCTGCCCATGCTGTTCTATCTGGCCGGG 180
consensus_702#1      GCTCTG------CTGATAACGGTGTCCGGCCTGTCAGCAA----ACTCTAGAAGGA-GGG 169
                     ******      ***  * ** *    *** **    * *      ****   **  ***

consensus_702#0      CTGGTCGAGCTGGCGGGTGAGCAGGTGCAGTCACCCGAACGGGTCGCCACACTGCTGGTG 240
consensus_702#1      CCGAAAAAGCGGCT---TCTACTCTTACTCTTGCT-GGGCAAGCCTTTTTTTTGTTGTTG 225
                     * *    *** *     *   *   * *  *  *  *  *  * *       ** ** **

consensus_702#0      GC-ACTGTTTACCCTTGCCGTACCGGTCAGCCGCTATCTGCACGCGAGTCGGCTCCAGCA 299
consensus_702#1      GCTGGCGTGTG------------------------------------------------- 236
                     **    ** *                                                  

consensus_702#0      GCGGCCCGTCCTGGTGCTCAGCGCGATGCTCATCGCGCTGGCCACGCTTGCGCTCGGCTG 359
consensus_702#1      ------------------------------------------------------------
                                                                                 

consensus_702#0      GCACTGTCACGAGCGACGAAACCGCAGCCTGGACCTAGCGGAGCTC 405
consensus_702#1      ----------------------------------------------
                                                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)