These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_702#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 405 fasta sequence [GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGCCCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTCGCTCTGTTTGCGCTGCAAGCGTTCCTGGGCGTGCTGCCCATGCTGTTCTATCTGGCCGGGCTGGTCGAGCTGGCGGGTGAGCAGGTGCAGTCACCCGAACGGGTCGCCACACTGCTGGTGGCACTGTTTACCCTTGCCGTACCGGTCAGCCGCTATCTGCACGCGAGTCGGCTCCAGCAGCGGCCCGTCCTGGTGCTCAGCGCGATGCTCATCGCGCTGGCCACGCTTGCGCTCGGCTGGCACTGTCACGAGCGACGAAACCGCAGCCTGGACCTAGCGGAGCTC] [+] EMBL AGA280751 [GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGCCCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTCGCTCTGTTTGCGCTGCAAGCGTTCCTGGGCGTGCTGCCCATGCTGTTCTATCTGGCCGGGCTGGTCGAGCTGGCGGGTGAGCAGGTGCAGTCACCCGAACGGGTCGCCACACTGCTGGTGGCACTGTTTACCCTTGCCGTACCGGTCAGCCGCTATCTGCACGCGAGTCGGCTCCAGCAGCGGCCCGTCCTGGTGCTCAGCGCGATGCTCATCGCGCTGGCCACGCTTGCGCTCGGCTGGCACTGTCACGAGCGACGAAACCGCAGCCTGGACCTAGCGGAGCTC] consensusID : consensus_702#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 236 fasta sequence [GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGCCCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTCGCTCTGCTGATAACGGTGTCCGGCCTGTCAGCAAACTCTAGAAGGAGGGCCGAAAAAGCGGCTTCTACTCTTACTCTTGCTGGGCAAGCCTTTTTTTTGTTGTTGGCTGGCGTGTG] [+] EMBL AGA283391 [GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGCCCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTCGCTCTGCTGATAACGGTGTCCGGCCTGTCAGCAAACTCTAGAAGGAGGGCCGAAAAAGCGGCTTCTACTCTTACTCTTGCTGGGCAAGCCTTTTTTTTGTTGTTGGCTGGCGTGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_702#0 GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGC 60 consensus_702#1 GCGCACGCACGAACCCAGCCCGCGCTGCAAGAGTGTCTCGCCCGCTGGCAGCAGCCCGGC 60 ************************************************************ consensus_702#0 CCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTC 120 consensus_702#1 CCGGGCCTGGTGGAAGCGCTGCGGCGCCAGGCGAACTTTACGCTGACCGTGCCCCTGCTC 120 ************************************************************ consensus_702#0 GCTCTGTTTGCGCTGCAAGCGTTCCTGGGCGTGCTGCCCATGCTGTTCTATCTGGCCGGG 180 consensus_702#1 GCTCTG------CTGATAACGGTGTCCGGCCTGTCAGCAA----ACTCTAGAAGGA-GGG 169 ****** *** * ** * *** ** * * **** ** *** consensus_702#0 CTGGTCGAGCTGGCGGGTGAGCAGGTGCAGTCACCCGAACGGGTCGCCACACTGCTGGTG 240 consensus_702#1 CCGAAAAAGCGGCT---TCTACTCTTACTCTTGCT-GGGCAAGCCTTTTTTTTGTTGTTG 225 * * *** * * * * * * * * * * * ** ** ** consensus_702#0 GC-ACTGTTTACCCTTGCCGTACCGGTCAGCCGCTATCTGCACGCGAGTCGGCTCCAGCA 299 consensus_702#1 GCTGGCGTGTG------------------------------------------------- 236 ** ** * consensus_702#0 GCGGCCCGTCCTGGTGCTCAGCGCGATGCTCATCGCGCTGGCCACGCTTGCGCTCGGCTG 359 consensus_702#1 ------------------------------------------------------------ consensus_702#0 GCACTGTCACGAGCGACGAAACCGCAGCCTGGACCTAGCGGAGCTC 405 consensus_702#1 ---------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||