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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7058#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1620 fasta sequence
[CAAATTTGAGCACAATGAGCACCGTGCCACCGTCGCGCAGGAAAAAAGTTGTCGCATTTGTTCCGTTCCTTTGCAGCCCTGGTGAAAAGTAAGGGGAAAAGAAAGCACAGTTCCGTAATAGGTGCATCCCGCACCGACTGGTACGAGTTTCAAAAAAGGAAGCACCCGCTAGCGGAACGGCACAAGACAACACAAGAAGGAAACCCGCGAGCGAAAGAAAGAAAACAAACGTTATATGGTTTACTAAAACAGCGACGACAGAGGGGAGGTACGATAAAAAAAAAAACAGCAGCAACACAACAAAACCGCCAACAAAATGAGCTGGTTACGATCGAGCCCGTTGCGGCAAAGTTTCAGCAAAAGCGGCAACAACAGCAACAGCAACGG-CG-GTGGCAGCGCGAATGACCGTTCGCGTTCCGGTGCCGGGGGCGGCGGGCTGTCGTCGGTGATTCGCCCGTTCGATGCAACCGAGTGCGATCCGAA-GCCTGCTACGACAGCTTCTGCATCCACTGGCAGCAGGCGTACGAGATCATACAGCGGTCCGAGAACTATCGCAGCCAGTCGCACGATGACGTGCTGGGCGTGGTGACACATCTAGACCACATGGTAACGCTGCTGCTGGTGGAGTTGCACCACTGCAACAAGCTCAGCCTGCCGGGACAGCCCACGCCGCCGGCACCCTGTCTGGAGCATCTGCTGAGCGAAAACCTACTCGACAAGCTGTACGAGTGGGGCATCAAGACGGGCCGATACGCAAACGCATCCCGATTGGAGCAGCTCAAGCTGTACGAGCAATTGGTGAGTCACTCGCGCCATCAGCTGCTGGTGCATGAACCGTTTCTTCGGCCGCTGCTGAAGCTGCTGGCCTCGAGCCAGAACGAAATCTATCCGCCGGACGTCGAGAAGCGGCTGGTGATACTGCTCAATCAGCTGTGCGTGGTGCTGATGCAGAACGTGCACCTGCTCGATCTGTTCTTCTTCTCCACCACGCAGACGCAGCAAAGCCACCACGCTAGCAACGGTGGGCACACGAACTTCATCATCTTTTCGCTGCTGATACCGGACGTCCACCGGGAGGGGTCGCTTCGGTCATCAGGCACGGGAACCCCCTGCTGGCCTGCATGGCGTGTCGCAGAAGAACTCGAACGTCGGCACGTACATTGCGACGTACTCGTCCATCTGTCCGGTGCTGGTGACCGGGCTCGGTGGGCTGTATTCGCGGCTGCCCAACCAGATCGAAATCAAAACCGTCGACTGGTATCGGATCACCACGGACGACGTGACGGAGCTGCCCGAGTGACGCTGTTCATGAACTCGCTCGAGTTTTGCAACGCAGTGGTGCAGGTTGCGCATACGATGATCCGCCAGCAGCTGCTCGATTTTCTCTACCAGGGCTTCCTGGTGCCCGTTCTAGGGCCGGCAATATTGCAGACGAACGTTGAATCGCAGGTGTCCGCGATGGCGTACTTCGACCTGATCGTACGGTCGATCACCGAGCCGGGGCTAATACAGATCGTGATCCGGTTTCTGCTGGACGAGGAAAAGTTCGACGGGCAGCGCATACTGGACGTGCTGGTTGAGCGGTTAAAACAGTATACGACGTCGCGGCTTATAAAAAAA]
[+] EMBL CNS08Q51 [CAAATTTGAGCACAATGAGCACCGTGCCACCGTCGCGCAGGAAAAAAGTTGTCGCATTTGTTCCGTTCCTTTGCAGCCCTGGTGAAAAGTAAGGGGAAAAGAAAGCACAGTTCCGTAATAGGTGCATCCCGCACCGACTGGTACGAGTTTCAAAAAAGGAAGCACCCGCTAGCGGAACGGCACAAGACAACACAAGAAGGAAACCCGCGAGCGAAAGAAAGAAAACAAACGTTATATGGTTTACTAAAACAGCGACGACAGAGGGGAGGTACGATAAAAAAAAAAACAGCAGCAACACAACAAAACCGCCAACAAAATGAGCTGGTTACGATCGAGCCCGTTGCGGCAAAGTTTCAGCAAAAGCGGCAACAACAGCAACAGCAACGG CG GTGGCAGCGCGAATGACCGTTCGCGTTCCGGTGCCGGGGGCGGCGGGCTGTCGTCGGTGATTCGCCCGTTCGATGCAACCGAGTGCGATCCGAA GCCTGCTACGACAGCTTCTGCATCCACTGGCAGCAGGCGTACGAGATCATACAGCGGTCCGAGAACTATCGCAGCCAGTCGCACGATGACGTGCTGGGCGTGGTGACACATCTAGACCACATGGTAACGCTGCTGCTGGTGGAGTTGCACCACTGCAACAAGCTCAGCCTGCCGGGACAGCCCACGCCGCCGGCACCCTGTCTGGAGCATCTGCTGAGCGAAAACCTACTCGACAAGCTGTACGAGTGGGGCATCAAGACGGGCCGATACGCAAACGCATCCCGATTGGAGCAGCTCAAGCTGTACGAGCAATTGGTGAGTCACTCGCGCCATCAGCTGCTGGTGCATGAACCGTTTCTTCGGCCGCTGCTGAAGCTGCTGGCCTCGAGC ]
[+] EMBL BM617976 [ ccgCGGACGCGTGG GCGCGAATGACCGTTCGCGTTCCGGTGCCGGGGGCGGCGGGCTGTCGTCGGTGATTCGCCCGTTCGATGCAACCGAGTGCGATCCGAAGGCCTGCTACGACAGTTTCTGCATCCACTGGCAGCAGGCGTACGAGATCATACAGCGGTCCGAGAACTATCGCAGCCAGTCGCACGATGACGTGCTGGGCGTGGTGACACATCTAGACCACATGGTAACGCTGCTGCTGGTGGAGTTGCACCACTGCAACAAGCTCAGCCTGCCGGGACAGCCCACGCCGCCGGCACCCTGTCTGGAGCATCTGCTGAGCGAAAACCTACTCGACAAGCTGTACGAGTGGGGCATCAAGACGGGCCGATACGCAAACGCAGTCCGATTGGAGCAGCTCAAGCTGTACGAGCAATTGGTGAGTCACTCGCGCCATCAGCTGCTGGTGCATGAACCGTTTCTCCGGCCGCTGCTGAAGCTGCTGGCCTCGAGCCAGAACGAAATCTATCCGCCGGACGTCGAGAAGCGGCTGGTGATACTGCTCAATCAGCTGTGCGTGGTGCTGATGCAGAACGTGCACCTGCTCGATCTGTTCTTCTTCTCCACCACGCAGACGCAGCAAAGCCACCACGCTAGCAACGGTGGGCACACGAACTTCATCATCTTTTCGCTGCTGATACCGGACGTCCACCGGGAGGGGTCGCTTCGGTCATCAGGCACGGGAACCCCCTGCTGGC ]
[-] EMBL CNS08Q52 [ GCCAGAACGAAATCTATCCACCGGACGTCGAGAAGCGGCTGGTGATACTGCTCAATCAGCTGTGCGTGGTGCTGATGCAGAACGTGCACCTGCTCGATCTGTTCTTCTTCTCCACCACGCAGACGCAGCAAAGCCACCACGCTAGCAACGGTGGCCACACGAACTTCATCATCTTTTCGCTGCTGGTACCGTACGTCCACCGGGAGGGGTCGC TCGGTCATAAGGCACGGG ACGCCCTGCTGCTCTGCATGGCGTGTCGCAGAAGAACTCGAACGTCGGCACGTACATTGCGACGTACTCGTCCATCTGTCCGGTGCTGGTGACCGGGCTCGGTGGGCTGTATTCGCGGCTGCCCAACCAGATCGAAATCAAAACCGTCGACTGGTATCGGATCACCACGGACGACGTGACGGAGCTGCCCGAGTGACGCTGTTCATGAACTCGCTCGAGTTTTGCAACGCAGTGGTGCAGGTTGCGCATACGATGATCCGCCAGCAGCTGCTCGATTTTCTCTACCAGGGCTTCCTGGTGCCCGTTCTAGGGCCGGCAATATTGCAGACGAACGTTGAATCGCAGGTGTCCGCGATGGCGTACTTCGACCTGATCGTACGGTCGATCACCGAGCCGGGGCTAATACAGATCGTGATCCGGTTTCTGCTGGACGAGGAAAAGTTCGACGGGCAGCGCATACTGGACGTGCTGGTTGAGCGGTTAAAACAGTATACGACGTCGCGGCTTATAAAAAAA]
consensusID : consensus_7058#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 702 fasta sequence
[CCGCCCACGCGTCCGTGAGCAGCAATGAGCCACCGTGCCACCGTCGTGCAGGAAAAAAGTCGTCGCATTTGTTCCGTTCCTTTGCAGCCCTGGTGAAAAGTAAGGGGAAAAGAAAGCACAGTTCCGTAATAGGTGCATCCCGCACCGACTGGTACGAGACCGTTTTCCAAGTGTAAATCTAATGTCTCATCCGTGTGCTGCTAACGGTGGTGGGGTTTGTTATTAAACGATTCCCCCTCCTTCGGCGCACTCCGACTCCGGATGGCTGCCGGATGATGGATTAGAGAGTGTTCGGTTCTTGCGATTTGTGTGCCACCTGTGTGCCGTTGTGTGTAACATGGCACTGTCCATATACGATGCGAATCCGATTGTACAGCGCAGTTGAGTGTGAGTGAGTAAGTTCAAAAATTCGAACGGGACCCGAGCCGGAAACGGCAAACCAACCACCTTGTCCGCGCACCATCACCACCGTTTGAAGAAAAAAAATACTGTGTGGTCGGACGATTCGAGAAACATCTACCCCTAAGTTTCAAAAAAAAAAATACTGTGTGGTCGGACGATTCGAGAAACATCTACCCCTAAGTTTCAAAAAAGGAAGCACCCGCTAGCGGAACGGCACAAGACAACACAAGAAGGAAACCCGCGAGCGAAAGAAAGAAATCAAACGTTATATGGTTTACTAAAACAGCGACGACAGAGGAG]
[+] EMBL BM594642 [CCGCCCACGCGTCCGTGAGCAGCAATGAGCCACCGTGCCACCGTCGTGCAGGAAAAAAGTCGTCGCATTTGTTCCGTTCCTTTGCAGCCCTGGTGAAAAGTAAGGGGAAAAGAAAGCACAGTTCCGTAATAGGTGCATCCCGCACCGACTGGTACGAGACCGTTTTCCAAGTGTAAATCTAATGTC ]
[+] EMBL BX628927 [ GAGCAGCAATGAGCCACCGTGCCACCGTCGTGCAGGAAAAAAGTCGTCGCATTTGTTCCGTTCCTTTGCAGCCCTGGTGAAAAGTAAGGGGAAAAGAAAGCACAGTTCCGTAATAGGTGCATCCCGCACCGACTGGTACGAGACCGTTTTCCAAGTGTAAATCTAATGTCTCATCCGTGTGCTGCTAACGGTGGTGGGGTTTGTTATTAAACGATTCCCCCTCCTTCGGCGCACTCCGACTCCGGATGGCTGCCGGATGATGGATTAGAGAGTGTTCGGTTCTTGCGATTTGTGTGCCACCTGTGTGCCGTTGTGTGTAACATGGCACTGTCCATATACGATGCGAATCCGATTGTACAGCGCAGTTGAGTGTGAGTGAGTAAGTTCAAAAATTCGAACGGGACCCGAGCCGGAAACGGCAAACCAACCACCTTGTCCGCGCACCATCACCACCGTTTGAAG ]
[+] EMBL BX627118 [ TCCTTTGCAGCCCTGGTGAAAAGTAAGGGGAAAAGAAAGCACAGTTCCGTAATAGGTGCATCCCGCACCGACTGGTACGAGACCGTTTTCCAAGTGTAAATCTAATGTCTCATCCGTGTGCTGCTAACGGTGGTGGGGTTTGTTATTAAACGATTCCCCCTCCTTCGGCGCACTCCGACTCCGGATGGCTGCCGGATGATGGATTAGAGAGTGTTCGGTTCTTGCGATTTGTGTGCCACCTGTGTGCCGTTGTGTGTAACATGGCACTGTCCATATACGATGCGAATCCGATTGTACAGCGCAGTTGAGTGTGAGTGAGTAAGTTCAAAAATTCGAACGGGACCCGAGCCGGAAACGGCAAACCAACCACCTTGTCCGCGCACCATCACCACCGTTTGAAGAAAAAAAATACTGTGTGGTCGGACGATTCGAGAAACATCTACCCCTAAGTTTCAAAAAAAAAAATACTGTGTGGTCGGACGATTCGAGAAACATCTACCCCTAAGTTTCAAAAAAGGAAGCACCCGCTAGCGGAACGGCACAAGACAACACAAGAAGGAAACCCGCGAGCGAAAGAAAGAAATCAAACGTTATATGGTTTACTAAAACAGCGACGACAGAGGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7058#0 ---------CAAATTTGAGCA-CAATGAGC-ACCGTGCCACCGTCGCGCAGGAAAAAAGT 49
consensus_7058#1 CCGCCCACGCGTCCGTGAGCAGCAATGAGCCACCGTGCCACCGTCGTGCAGGAAAAAAGT 60
* ****** ******** *************** *************
consensus_7058#0 TGTCGCATTTGTTCCGTTCCTTTGCAGCCCTGGTGAAAAGTAAGGGGAAAAGAAAGCACA 109
consensus_7058#1 CGTCGCATTTGTTCCGTTCCTTTGCAGCCCTGGTGAAAAGTAAGGGGAAAAGAAAGCACA 120
***********************************************************
consensus_7058#0 GTTCCGTAATAGGTGCATCCCGCACCGACTGGTACGAG----TTTCAAAAAAGGAAGCAC 165
consensus_7058#1 GTTCCGTAATAGGTGCATCCCGCACCGACTGGTACGAGACCGTTTTCCAAGTGTAA--AT 178
************************************** *** ** * ** *
consensus_7058#0 CCGCTAGCGGAACGGCACAAGACAACACAAGAAGGAAACCCGCGAGCGAAAGAAAGAAAA 225
consensus_7058#1 CTAATGTCTCATCCGTGTGCTGCTA-ACGGTGGTGGGGTTTGTTATTAAACGAT------ 231
* * * * * * * * ** * * * ** **
consensus_7058#0 CAAACGTTATATGGTTTACTAAAACAGCG-ACGACAGAGGGGAGGTACGATAAAAAAAAA 284
consensus_7058#1 TCCCCCTCCTTCGGCGCACTCCGACTCCGGATGGCTGCCGGATGATG-GATTAGAGAGTG 290
* * * ** *** ** ** * * * * ** * * *** * * *
consensus_7058#0 AACAGCAGCAACACAACAAAACCGCCAACAAAATGA-GCTGGTTACGATCGAGCCCGTTG 343
consensus_7058#1 TTCGGTTCT--TGCGATTTGTGTGCCACCTGTGTGCCGTTGTGTGTAACATGGCACTGTC 348
* * * * **** * ** * ** * * ** * *
consensus_7058#0 CGGCAAAGTTTCAGCAAAAGCGGCAACAACAGCAACAGCAACGGCGGTGGCAGCGCGAAT 403
consensus_7058#1 CATATACGATGCGAATCCGATTGTA-CAGCGCAGTTGAGTGTGAGTGAGTAAGTTCAAAA 407
* * * * * * * ** * * * * ** * **
consensus_7058#0 GACCGTTCGCGTTCCGGTGCCGGGGGCGGCGGGCTGTCGTCGGTGATTCGCCCGTTCGAT 463
consensus_7058#1 ATTCGAACGGGACCCGA-GCCGGAAACGGCAAACCAACCAC-----CTTGTCCGCGCACC 461
** ** * *** ***** **** * * * * * *** *
consensus_7058#0 GCAACCGAGTGCGATCCGAAGCCTGCTACGACAGCTTCTGCATCCACTGGCAGCAGGCGT 523
consensus_7058#1 ATCACC----ACCGTTTGAAG------AAAAAAAATACTGTGTGGTCGGACGATTCGAGA 511
*** * * **** * * * * *** * * * * * *
consensus_7058#0 ACGAGATCATACAGCGGTCCGAGAACTATCGCAGCCAGTCGCACGATGACGTGCTGGGCG 583
consensus_7058#1 AACATCTACCCCTAAGTTTCAAAAAAAAAAATACTGTGTGGTCGGACGATTCGAGAAACA 571
* * * * * * * * ** * * ** * ** ** * *
consensus_7058#0 TGGTGACACATCTAGACCACATGGTAACGCTGCTGCTGGTGGAGTTGCACCA--CTGCAA 641
consensus_7058#1 T--CTACCCCTAAGTTTCAAAAAAGGAAGCACCCGCTAGCGGAACGGCACAAGACAACAC 629
* ** * * ** * * ** * *** * *** **** * * **
consensus_7058#0 CAAGCTCAGCCTGCCGGGACAGCCCACGCCGCCGGCACCCTGTCTGGAGCATCTGCTGAG 701
consensus_7058#1 AAGAAGGAAACCCGCGAGCGAAAGAAAGAAATCAA-ACGTTATATGGTTTACTAAAACAG 688
* * * ** * * * * * ** * * *** * **
consensus_7058#0 CGAAAACCTACTCGACAAGCTGTACGAGTGGGGCATCAAGACGGGCCGATACGCAAACGC 761
consensus_7058#1 CGACGACAGAGGAG---------------------------------------------- 702
*** ** * *
consensus_7058#0 ATCCCGATTGGAGCAGCTCAAGCTGTACGAGCAATTGGTGAGTCACTCGCGCCATCAGCT 821
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 GCTGGTGCATGAACCGTTTCTTCGGCCGCTGCTGAAGCTGCTGGCCTCGAGCCAGAACGA 881
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 AATCTATCCGCCGGACGTCGAGAAGCGGCTGGTGATACTGCTCAATCAGCTGTGCGTGGT 941
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 GCTGATGCAGAACGTGCACCTGCTCGATCTGTTCTTCTTCTCCACCACGCAGACGCAGCA 1001
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 AAGCCACCACGCTAGCAACGGTGGGCACACGAACTTCATCATCTTTTCGCTGCTGATACC 1061
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 GGACGTCCACCGGGAGGGGTCGCTTCGGTCATCAGGCACGGGAACCCCCTGCTGGCCTGC 1121
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 ATGGCGTGTCGCAGAAGAACTCGAACGTCGGCACGTACATTGCGACGTACTCGTCCATCT 1181
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 GTCCGGTGCTGGTGACCGGGCTCGGTGGGCTGTATTCGCGGCTGCCCAACCAGATCGAAA 1241
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 TCAAAACCGTCGACTGGTATCGGATCACCACGGACGACGTGACGGAGCTGCCCGAGTGAC 1301
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 GCTGTTCATGAACTCGCTCGAGTTTTGCAACGCAGTGGTGCAGGTTGCGCATACGATGAT 1361
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 CCGCCAGCAGCTGCTCGATTTTCTCTACCAGGGCTTCCTGGTGCCCGTTCTAGGGCCGGC 1421
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 AATATTGCAGACGAACGTTGAATCGCAGGTGTCCGCGATGGCGTACTTCGACCTGATCGT 1481
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 ACGGTCGATCACCGAGCCGGGGCTAATACAGATCGTGATCCGGTTTCTGCTGGACGAGGA 1541
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 AAAGTTCGACGGGCAGCGCATACTGGACGTGCTGGTTGAGCGGTTAAAACAGTATACGAC 1601
consensus_7058#1 ------------------------------------------------------------
consensus_7058#0 GTCGCGGCTTATAAAAAAA 1620
consensus_7058#1 -------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||