cluster # 7122

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Anopheles gambiae
cluster # 7122 cluster # 7122 Sequences # 6 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7122#0 length = 1359 sequences # 3
consensus_7122#1 length = 790 sequences # 1

consensus_7122#2 length = 723 sequences # 1
consensus_7122#3 length = 564 sequences # 1

consensusID : consensus_7122#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1359
fasta sequence

                              [GCACATACTGCCCTTTTTTTGNTATTTTTTTGGACTTTTATAAAGGTTAAATTTATTTGGCTTTAGGTACAATGGAATCGAAGCATAGGTTGATTATGTATACAGTAATTTCATTTAAAAATTTCTTCAAAATAATAAAAAAGCTCTAAAAATGTATTTCCGCGATGGTATATTTGTGGTAGTGATGAAACAATGCAGAGAATGGAGTCGATGGAGAAACTATGGGAGGTTTACATTCTATTGTGATAAATGATTGCAAAACTGCAGTGCAAAGTTGACACCAAAGCTAAAGACTATTTTGCCACATATCGAGATAACCATTATGGTTGTTTAATACCTTCATAAGGTACGTAAATGACCAAACGTAGCAGATTACGAAGTTTATGTTTCTATGCTCAATTCTATTCTAAAATCGCATCGTTTGTTTCGTAATACTGATTACGACGTTTTGTGTATGTCTTTGGTGTACGTTTTTGCATGTAACTACAACACTGTCTTTTGGCACATGTTATTTAAACTACGCCTAAATACGTTCATCAAACTGGTGTTTTGAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCTCGGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTTGGCCGTG-TTTCTGTAAACTGTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATCCTACACGGGCGGGCGGGAGTTCATCGTTGTGTTGGCCACACCGGAAGAACATTGTTTCCAGTGCGAAGAGAGGGAATAGATAATGATAGACGGATGGTGAAAAATAATGAAATTGAAAAGCTGCTCTAAAAGAGCGCTTATAATGCAGAGAAAATGGCGAAAATAACGATAGGTCATGATGTTGCTGGACGTATAAAAATTGATGGTATAATAACGTCACCGTCCACCGGAAACAAACAGTAGGGAATACTTGCGGAACACTTCGATCAGTTCCATTAGGGAGTAAAGGTGAGTTGGGTGTAAGTGATGTGCCTCCCTAACGTCATTTCGATGTTTCAACCGTTCAACATCCTGGTGGAGGTGACAGCTCATTATTTTTCGTGGCACCCTCTTCCTTGCCGGGGCGCAGTCCGGATGCAATCATGTAGGTACTTCCGATGGTTTTTATCTTCTCGCGG]

[+] EMBL BX466796             [GCACATACTGCCCTTTTTTTGNTATTTTTTTGGACTTTTATAAAGGTTAAATTTATTTGGCTTTAGGTACAATGGAATCGAAGCATAGGTTGATTATGTATACAGTAATTTCATTTAAAAATTTCTTCAAAATAATAAAAAAGCTCTAAAAATGTATTTCCGCGATGGTATATTTGTGGTAGTGATGAAACAATGCAGAGAATGGAGTCGATGGAGAAACTATGGGAGGTTTACATTCTATTGTGATAAATGATTGCAAAACTGCAGTGCAAAGTTGACACCAAAGCTAAAGACTATTTTGCCACATATCGAGATAACCATTATGGTTGTTTAATACCTTCATAAGGTACGTAAATGACCAAACGTAGCAGATTACGAAGTTTATGTTTCTATGCTCAATTCTATTCTAAAATCGCATCGTTTGTTTCGTAATACTGATTACGACGTTTTGTGTATGTCTTTGGTGTACGTTTTTGCATGTAACTACAACACTGTCTTTTGGCACATGTTATTTAAACTACGCCTAAATACGTTCATCAAACTGGTGTTTTGAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCTCGGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTTGGCCGTG TTTCTGTAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BM583213             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCATGTAACTACAACACTGTCTTTTGGCACATGTTATTTAAACTACGCCTAAATACGTTCATCAAA TGGTGTTTT AACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCTC GACAATCGCACGAATAACCTGCTGCCATAAGGAC TTTGGCCGTGTTTTCTGTAACCTGTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATCCTACACGGGCGGGCGGGAGTTCATCGTTGTGTTGGCCACACCGGAAGAACATTGTTTCCAGTGCGAAGAGAGGGAATAGATAATGATAGACGGATGGTGAAAAATAATGAAATTGAAAAGCTGCTCTAAAAGAGCGCTTATAATGCAGAGAAAATGGCGAAAATAACGATAGGTCATGATGTTGCTGGACGTATAAAAATTGATGGTATAATAACGTCACCGTCCACCGGAAACAAACAGTAGGGAATACTTGCGG                                                                                                                                                                                                          ]
[-] EMBL BM593930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATCCTACACGGGCGGGCGGGAGTTCATCGTTGTGTTGGCCACACCGGAAGAACATTGTTTCCAGTGCGAAGAGAGGGAATAGATAATGATAGACGGATGGTGAAAAATAATGAAATTGAAAAGCTGCTCTAAAAGAGCGCTTATAATGCAGAGAAAATTGCGAAAATAACGATAGGTCATGATGTTGCTGGACGTATAAAAATTGATGGTATAATAACGTCACCGTCCACCGGAAGCAAACAGTAGGGAATACTTGGGAAACACTTCGATCAGTTCCATTAGGGAGTAAAGGTGAGTTGGGTGTAAGTGATGTGCCTCCCTAACGTCATTTCGATGTTTCAACCGTTCAACATCCTGGTGGAGGTGACAGCTCATTATTTTTCGTGGCACCCTCTTCCTTGCCGGGGCGCAGTCCGGATGCAATCATGTAGGTACTTCCGATGGTTTTTATCTTCTCGCGG]




>consensus_7122#0
GCACATACTGCCCTTTTTTTGNTATTTTTTTGGACTTTTATAAAGGTTAAATTTATTTGG
CTTTAGGTACAATGGAATCGAAGCATAGGTTGATTATGTATACAGTAATTTCATTTAAAA
ATTTCTTCAAAATAATAAAAAAGCTCTAAAAATGTATTTCCGCGATGGTATATTTGTGGT
AGTGATGAAACAATGCAGAGAATGGAGTCGATGGAGAAACTATGGGAGGTTTACATTCTA
TTGTGATAAATGATTGCAAAACTGCAGTGCAAAGTTGACACCAAAGCTAAAGACTATTTT
GCCACATATCGAGATAACCATTATGGTTGTTTAATACCTTCATAAGGTACGTAAATGACC
AAACGTAGCAGATTACGAAGTTTATGTTTCTATGCTCAATTCTATTCTAAAATCGCATCG
TTTGTTTCGTAATACTGATTACGACGTTTTGTGTATGTCTTTGGTGTACGTTTTTGCATG
TAACTACAACACTGTCTTTTGGCACATGTTATTTAAACTACGCCTAAATACGTTCATCAA
ACTGGTGTTTTGAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCC
TCGGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTTGGCCGTGTTTCTGTAAACT
GTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCC
AGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGA
GGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCA
TGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCAT
CCTACACGGGCGGGCGGGAGTTCATCGTTGTGTTGGCCACACCGGAAGAACATTGTTTCC
AGTGCGAAGAGAGGGAATAGATAATGATAGACGGATGGTGAAAAATAATGAAATTGAAAA
GCTGCTCTAAAAGAGCGCTTATAATGCAGAGAAAATGGCGAAAATAACGATAGGTCATGA
TGTTGCTGGACGTATAAAAATTGATGGTATAATAACGTCACCGTCCACCGGAAACAAACA
GTAGGGAATACTTGCGGAACACTTCGATCAGTTCCATTAGGGAGTAAAGGTGAGTTGGGT
GTAAGTGATGTGCCTCCCTAACGTCATTTCGATGTTTCAACCGTTCAACATCCTGGTGGA
GGTGACAGCTCATTATTTTTCGTGGCACCCTCTTCCTTGCCGGGGCGCAGTCCGGATGCA
ATCATGTAGGTACTTCCGATGGTTTTTATCTTCTCGCGG

consensusID : consensus_7122#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 790
fasta sequence

                              [ATTGCCCAANACTTTGCAGGTGTGCCAAAAGGTTGGANCAACTCNTAAAAAGGCCTTTTAAAGTGANCTNAGTGTNTTGGCCCCAACAATTATTCGAGTATTAACCCCATTGTAAATGGGGCTTCGAACTTAAAGTGACCCGTTNCAATTAAAGGGGTACGTAAATGACCTNAGCGTANGCAGATTACGAAAGTTNTATGGTTTCCTATGCTCAATTCTATTCTAAAATCGGCATCGTTTGTTTCGTACATACTGATTACGACGTTTTGTGTATGTCTTTGGTGTACGTTTTTGCATGTAACTACAACACTGTCTTTTGGCACATGTTATTNTGAAACCTACGCCTAAATACGTTCATCAAATGGTGTTTTAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCTCGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTGCGCCGTGTTTTCTGTAACCTGTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATCCAGCTCATTATTTTTCTACCGGGTTGGAGGTGAAACAAATGCACAATCATAACCTCGTNGNGATTCTGCC]

[-] EMBL BX467811             [ATTGCCCAANACTTTGCAGGTGTGCCAAAAGGTTGGANCAACTCNTAAAAAGGCCTTTTAAAGTGANCTNAGTGTNTTGGCCCCAACAATTATTCGAGTATTAACCCCATTGTAAATGGGGCTTCGAACTTAAAGTGACCCGTTNCAATTAAAGGGGTACGTAAATGACCTNAGCGTANGCAGATTACGAAAGTTNTATGGTTTCCTATGCTCAATTCTATTCTAAAATCGGCATCGTTTGTTTCGTACATACTGATTACGACGTTTTGTGTATGTCTTTGGTGTACGTTTTTGCATGTAACTACAACACTGTCTTTTGGCACATGTTATTNTGAAACCTACGCCTAAATACGTTCATCAAATGGTGTTTTAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCTCGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTGCGCCGTGTTTTCTGTAACCTGTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATCCAGCTCATTATTTTTCTACCGGGTTGGAGGTGAAACAAATGCACAATCATAACCTCGTNGNGATTCTGCC]




>consensus_7122#1
ATTGCCCAANACTTTGCAGGTGTGCCAAAAGGTTGGANCAACTCNTAAAAAGGCCTTTTA
AAGTGANCTNAGTGTNTTGGCCCCAACAATTATTCGAGTATTAACCCCATTGTAAATGGG
GCTTCGAACTTAAAGTGACCCGTTNCAATTAAAGGGGTACGTAAATGACCTNAGCGTANG
CAGATTACGAAAGTTNTATGGTTTCCTATGCTCAATTCTATTCTAAAATCGGCATCGTTT
GTTTCGTACATACTGATTACGACGTTTTGTGTATGTCTTTGGTGTACGTTTTTGCATGTA
ACTACAACACTGTCTTTTGGCACATGTTATTNTGAAACCTACGCCTAAATACGTTCATCA
AATGGTGTTTTAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCT
CGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTGCGCCGTGTTTTCTGTAACCTG
TACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCCA
GATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAG
GCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCAT
GAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATC
CAGCTCATTATTTTTCTACCGGGTTGGAGGTGAAACAAATGCACAATCATAACCTCGTNG
NGATTCTGCC

consensusID : consensus_7122#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 723
fasta sequence

                              [TGGTGTTTAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCTCGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTGGCCGTGTTTTCTGTAACCTGTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATCCGTGGCACCCTCTTCCTTGCCGGGGCGCAGTCCGGATGCAATCATGTAGGTACTTCCGATGGTTTTTATCTTCTCGATACCGCTGAACTTAGGCTTGAGCAGAAGCTTGTCAAAGTCGCAGATAATCTCGTTCAGTAACCGTAAGCACTCAAGCCCCTGCTTGTTCACATCCGTTTCGTCGTAGAACTCCTTGTAGTTCGGAATCGAAGCAAACATGACCGCAACAGACGAGTAACTCTCGTGATAAAGCTCCTGCACGGCACGTTCCTTCTTGAGAAAGTGCTGGGCGACGTGCGCGGGCAATATGTTTTCCAATAAAATCTTATTGATTCCTCGCATAGTTTCGACCTCTTCTTGCTCCACCCGG]

[-] EMBL BM616278             [TGGTGTTTAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCTCGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTGGCCGTGTTTTCTGTAACCTGTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATCCGTGGCACCCTCTTCCTTGCCGGGGCGCAGTCCGGATGCAATCATGTAGGTACTTCCGATGGTTTTTATCTTCTCGATACCGCTGAACTTAGGCTTGAGCAGAAGCTTGTCAAAGTCGCAGATAATCTCGTTCAGTAACCGTAAGCACTCAAGCCCCTGCTTGTTCACATCCGTTTCGTCGTAGAACTCCTTGTAGTTCGGAATCGAAGCAAACATGACCGCAACAGACGAGTAACTCTCGTGATAAAGCTCCTGCACGGCACGTTCCTTCTTGAGAAAGTGCTGGGCGACGTGCGCGGGCAATATGTTTTCCAATAAAATCTTATTGATTCCTCGCATAGTTTCGACCTCTTCTTGCTCCACCCGG]




>consensus_7122#2
TGGTGTTTAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCCTCGA
CAATCGCACGAATAACCTGCTGCCATAAGGACTTTGGCCGTGTTTTCTGTAACCTGTACT
CGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCCAGATG
TCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGAGGCCG
ATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCATGAGA
GCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCATCCGTG
GCACCCTCTTCCTTGCCGGGGCGCAGTCCGGATGCAATCATGTAGGTACTTCCGATGGTT
TTTATCTTCTCGATACCGCTGAACTTAGGCTTGAGCAGAAGCTTGTCAAAGTCGCAGATA
ATCTCGTTCAGTAACCGTAAGCACTCAAGCCCCTGCTTGTTCACATCCGTTTCGTCGTAG
AACTCCTTGTAGTTCGGAATCGAAGCAAACATGACCGCAACAGACGAGTAACTCTCGTGA
TAAAGCTCCTGCACGGCACGTTCCTTCTTGAGAAAGTGCTGGGCGACGTGCGCGGGCAAT
ATGTTTTCCAATAAAATCTTATTGATTCCTCGCATAGTTTCGACCTCTTCTTGCTCCACC
CGG

consensusID : consensus_7122#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence

                              [NCGGCACTTCATCCTTGCTCNCTTGNCCCACACCGTGNNAGTCACACTTGTTTCCAGTNCGCAAGAGANGCGANACTAGCATCATGATAGCCGGCATCGCGTGCCCCCCATCCATGCAANNTNCCCACCGCTGCTCTNCNCCGAGCGCCTTATAATGCAGAGCACACATGGCGNNAATCNCGATAGGTCATGATGTTGCTGGACGTATACCAATTGATGGTATAATAACGTCACCGTCCACCGGAAGCAAACAGTAGGGAATACGTGGGAAACACTTCGATCAGTTCCATTAGGGAGTAAAGGTGAGTTGGGTGTAAGTGATGTGCCTCCCTAACGTCATTTAGATGTTTCAACCGTTTACTAACATCCTGGTGGAGGTGGCTAAAATCAAAAGTCTAACAAGGTCTACCATTCCAGCAGTTGGTGGTGATACGTACCAGCTCATTATTTTTCTACCGGGTTGGACGTGGAAACAAATGCACAATCATGAAATGGGAAACAAGTGAGTTAGTAAACATAAGNGAAAACAATTCAAACAATTTNTACACTCGTGCGGATTCTGCC]

[-] EMBL BX468237             [NCGGCACTTCATCCTTGCTCNCTTGNCCCACACCGTGNNAGTCACACTTGTTTCCAGTNCGCAAGAGANGCGANACTAGCATCATGATAGCCGGCATCGCGTGCCCCCCATCCATGCAANNTNCCCACCGCTGCTCTNCNCCGAGCGCCTTATAATGCAGAGCACACATGGCGNNAATCNCGATAGGTCATGATGTTGCTGGACGTATACCAATTGATGGTATAATAACGTCACCGTCCACCGGAAGCAAACAGTAGGGAATACGTGGGAAACACTTCGATCAGTTCCATTAGGGAGTAAAGGTGAGTTGGGTGTAAGTGATGTGCCTCCCTAACGTCATTTAGATGTTTCAACCGTTTACTAACATCCTGGTGGAGGTGGCTAAAATCAAAAGTCTAACAAGGTCTACCATTCCAGCAGTTGGTGGTGATACGTACCAGCTCATTATTTTTCTACCGGGTTGGACGTGGAAACAAATGCACAATCATGAAATGGGAAACAAGTGAGTTAGTAAACATAAGNGAAAACAATTCAAACAATTTNTACACTCGTGCGGATTCTGCC]




>consensus_7122#3
NCGGCACTTCATCCTTGCTCNCTTGNCCCACACCGTGNNAGTCACACTTGTTTCCAGTNC
GCAAGAGANGCGANACTAGCATCATGATAGCCGGCATCGCGTGCCCCCCATCCATGCAAN
NTNCCCACCGCTGCTCTNCNCCGAGCGCCTTATAATGCAGAGCACACATGGCGNNAATCN
CGATAGGTCATGATGTTGCTGGACGTATACCAATTGATGGTATAATAACGTCACCGTCCA
CCGGAAGCAAACAGTAGGGAATACGTGGGAAACACTTCGATCAGTTCCATTAGGGAGTAA
AGGTGAGTTGGGTGTAAGTGATGTGCCTCCCTAACGTCATTTAGATGTTTCAACCGTTTA
CTAACATCCTGGTGGAGGTGGCTAAAATCAAAAGTCTAACAAGGTCTACCATTCCAGCAG
TTGGTGGTGATACGTACCAGCTCATTATTTTTCTACCGGGTTGGACGTGGAAACAAATGC
ACAATCATGAAATGGGAAACAAGTGAGTTAGTAAACATAAGNGAAAACAATTCAAACAAT
TTNTACACTCGTGCGGATTCTGCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7122#0      GCACATACTGCCCTTTTTTTGNTATTTTTTTGGACTTTTATAAAGGTTAAATTTATTTGG 60
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      CTTTAGGTACAATGGAATCGAAGCATAGGTTGATTATGTATACAGTAATTTCATTTAAAA 120
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      ATTTCTTCAAAATAATAAAAAAGCTCTAAAAATGTATTTCCGCGATGGTATATTTGTGGT 180
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      AGTGATGAAACAATGCAGAGAATGGAGTCGATGGAGAAACTATGGGAGGTTTACATTCTA 240
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      TTGTGATAAATGATTGCAAAACTGCAGTGCAAAGTTGACACCAAAGCTAAAGACTATTTT 300
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      GCCACATATCGAGATAACCATTATGGTTGTTTAATACCTTCATAAGGTACGTAAATGACC 360
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      AAACGTAGCAGATTACGAAGTTTATGTTTCTATGCTCAATTCTATTCTAAAATCGCATCG 420
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      TTTGTTTCGTAATACTGATTACGACGTTTTGTGTATGTCTTTGGTGTACGTTTTTGCATG 480
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      TAACTACAACACTGTCTTTTGGCACATGTTATTTAAACTACGCCTAAATACGTTCATCAA 540
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      ACTGGTGTTTTGAACAAAGTAAGTCGTCAGAATTCCTTTGCCTTTGACATGAATAGGTCC 600
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------ATTGCCCAANACTTTGCAGGTGTGCCAAAAGGTTGGANCAACTCNTAA 48
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      TCGGACAATCGCACGAATAACCTGCTGCCATAAGGACTTTTGGCCGTGTTTCTGTAAACT 660
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      AAAGGCCTTTTAAAGTGANCTNAGTGTNTTGGCCCCAACAATTATTCGAGTATTAACCCC 108
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      GTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTTAACTGTGTTGCTCC 720
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ATTGTAAATGGGGCTTCGAACTTAAAGTGACCCGTTNCAATTAAAGGGGTACGTAAATGA 168
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      AGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCACCGGACCATGGTTGA 780
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      CCTNAGCGTANGCAGATTACGAAAGTTNTATGGTTTCCTATGCTCAATTCTATTCTAAAA 228
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      GGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTGATCCAACGCCGTCA 840
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      TCGGCATCGTTTGTTTCGTACATACTGATTACGACGTTTTGTGTATGTCTTTGGTGTACG 288
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      TGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTCGGTACGTTTTTCAT 900
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      TTTTTGCATGTAACTACAACACTGTCTTTTGGCACATGTTATTNTGAAACCTACGCCTAA 348
consensus_7122#2      ------------------------------------------------------------
                                                                                  

consensus_7122#0      CCTACACGGGCGGGCGGGAGTTCATCGTTG---TGTTGGCC-ACACCGGAAGA---ACA- 952
consensus_7122#3      -------------NCGGCACTTCATCCTTGCTCNCTTGNCCCACACCGTGNNAGTCACAC 47
consensus_7122#1      ATACGTTCATCAAATGGTGTTTTAACAAAG-TAAGTCGTCAGAATTCCTTTGCCTTTGAC 407
consensus_7122#2      --------------TGGTGTTT-AACAAAG-TAAGTCGTCAGAATTCCTTTGCCTTTGAC 44
                                     **   ** * *   *     * * *  *   *           * 

consensus_7122#0      TTGTTTCCAGTGCG-AAGAGAGGGAATAG----ATAATGATAGACGG-ATGGTGAAA--- 1003
consensus_7122#3      TTGTTTCCAGTNCGCAAGAGANGCGANACTAGCATCATGATAGCCGGCATCGCGTGCCCC 107
consensus_7122#1      ATGAATA-GGTCCTCGACAATCGCACGAATAACCTGCTGCCATAAGG-ACTTTGCGCCGT 465
consensus_7122#2      ATGAATA-GGTCCTCGACAATCGCACGAATAACCTGCTGCCATAAGG-ACTTTG-GCCGT 101
                       **  *   ** *   * *   *    *      *  **  *   ** *    *      

consensus_7122#0      ---AATAATGAAATTGA---AAAGCTGCTCTAAAA-GAGCGC-TTATAATGCAGAGAAAA 1055
consensus_7122#3      -CCATCCATGCAANNTNCCCACCGCTGCTCTNCNCCGAGCGCCTTATAATGCAGAGCACA 166
consensus_7122#1      GTTTTCTGTAACCTGTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTT 525
consensus_7122#2      GTTTTCTGTAACCTGTACTCGTCCCATCACTCCACATGAGTCCATACGGGACGCCACGTT 161
                              *               *  * **          *  **     *        

consensus_7122#0      --TGGCGAAAATAACGATAGGTCATGATG-TTGCTGGACGT-----ATAAAAATTGATGG 1107
consensus_7122#3      CATGGCGNNAATCNCGATAGGTCATGATG-TTGCTGGACGT-----ATACCAATTGATGG 220
consensus_7122#1      AACTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCAC 585
consensus_7122#2      AACTGTGTTGCTCCAGATGTCGTATTGTGGCTTTTGGGCTCCTATGACACCGGCTATCAC 221
                          * *    *   ***     **  **  *  *** *       * *     *     

consensus_7122#0      TATAATAACGTCACCGTCCACCGGAAAC--AAACAGTAGGGAATACTTGCGGAACACTTC 1165
consensus_7122#3      TATAATAACGTCACCGTCCACCGGAAGC--AAACAGTAGGGAATACGTGGGAAACACTTC 278
consensus_7122#1      CGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTG 645
consensus_7122#2      CGGACCATGGTTGAGGCCGATCCGCAACCGGAATCTTTGGAACGATTCACGATTTATTTG 281
                         *  *  **    * * * * * * *   **   * ** *  *     *    * ** 

consensus_7122#0      GATCAGTTCCATTA-GGGAGTAAAGGTGAGTTGGGTGTAAGTGA------TGTGCCTCCC 1218
consensus_7122#3      GATCAGTTCCATTA-GGGAGTAAAGGTGAGTTGGGTGTAAGTGA------TGTGCCTCCC 331
consensus_7122#1      ATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTC 705
consensus_7122#2      ATCCAACGCCGTCATGAGAGCAATGGCAAACTCCACTAGCACGACCACATTGTGTTCCTC 341
                         **   ** * * * *** ** **  *  *          **      ****   * *

consensus_7122#0      TA-ACGTCATTTCGATGTTTCAACCGTTCA---ACATCCTGGTGGAGGTGACAGCTCATT 1274
consensus_7122#3      TA-ACGTCATTTAGATGTTTCAACCGTTTACTAACATCCTGGTGGAGGTGGCTAAA-ATC 389
consensus_7122#1      GGTACGTTTTTCATCCAGCTCATTATTTTTCT-ACCGGGTTGGAGGTGAAACAAATGCAC 764
consensus_7122#2      GGTACGTTTTTCATCCGTGGCACCCTCTTCCTTGCCGGGGCGCAGTCCGGATGCAATCAT 401
                         ****  **         **     *      *      *  *               

consensus_7122#0      ATTTTTCGTGGCACCCTCTTCCTTGCCGGGGCGCAGTCCGGATGCA-ATCATGTAGGTAC 1333
consensus_7122#3      AAAAGTC-TAACAAGGTCTACCATTCCAGCAGTTGGTGGTGATACGTACCAGCTCATTAT 448
consensus_7122#1      AATCATAACCTCGTNGNGATTCTGCC---------------------------------- 790
consensus_7122#2      GTAGGTACTTCCGATGGTTTTTATCTTCTCGATACCGCTGAACTTAGGCTTGAGCAGAAG 461
                           *     *                                                

consensus_7122#0      TT--CCGATGGTTTTTATCTTCTCGCGG-------------------------------- 1359
consensus_7122#3      TTTTCTACCGGGTTGGACGTGGAAACAAATGCACAATCATGAAATGGGAAACAAGTGAGT 508
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      CTTGTCAAAGTCGCAGATAATCTCGTTCAGTAACCGT-AAGCACTCAAGCCCCTGCTTGT 520
                                                                                  

consensus_7122#0      ------------------------------------------------------------
consensus_7122#3      TAGTAAACATAAGNGAAAACAATTCAAACAATTTNTACACTCGTGCGGATTCTGCC---- 564
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      TCACATCCGTTTCGTCGTAGAACTCCTTGTAGTTCGGAATCGAAGCAAACATGACCGCAA 580
                                                                                  

consensus_7122#0      ------------------------------------------------------------
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      CAGACGAGTAACTCTCGTGATAAAGCTCCTGCACGGCACGTTCCTTCTTGAGAAAGTGCT 640
                                                                                  

consensus_7122#0      ------------------------------------------------------------
consensus_7122#3      ------------------------------------------------------------
consensus_7122#1      ------------------------------------------------------------
consensus_7122#2      GGGCGACGTGCGCGGGCAATATGTTTTCCAATAAAATCTTATTGATTCCTCGCATAGTTT 700
                                                                                  

consensus_7122#0      -----------------------
consensus_7122#3      -----------------------
consensus_7122#1      -----------------------
consensus_7122#2      CGACCTCTTCTTGCTCCACCCGG 723