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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7124#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1209 fasta sequence
[CCGCCCACGCGTCCGAAAGACCCTTGCCTTCGGTATACCGATGCTAGAAGGTATCATGCGTCTGAAGAAGGGCAAGAAACCGGTGGCAGACGATTCGAGCGAGCACGAAATGACGCCTCCACCGGAAGATATGGAAGTCACGGAGGAGGATGCAAAGGTGTTCGCAGAGGAGGGTCGTAAGCTGGGCAATTCGTCAGCCGCCCCTGAAGACAAACCCTTGTACGGGTTAATCCTTACACCGACTCGTGAATTAGCGGTACAGATTAACGATCATCTGAAGGCGGTCGCTAAGTATACCGACATTAACATTGCGACCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCGCAAATGTCCGGAGATAGTGATCGCAACGCCGGGTCGGCTGTGGGAGCTGGTCAAGAGTGAAAATCATCACCTTTCCAAGGTGACAGACATCAGATATCTCGTTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTTGGACATTCCGAACGTGGACCACGTCATCCACTATCAGGTGCCGAAGACGACGGAAAACTATGTGCACCGTTCGGGGCGTACGGCACGCGCAAGCAAGGAAGGTTTGACGGTGCTGCTGATTGGACCGTCCGANGTGAGGGACTACGTTAAGCTGAACCAAGATTTGGGCCGCACGGAGGATCTGCCACT]
[+] EMBL BM622002 [CCGCCCACGCGTCCGAAAGACCCTTGCCTTCGGTATACCGATGCTAGAAGGTATCATGCGTCTGAAGAAGGGCAAGAAACCGGTGGCAGACGATTCGAGCGAGCACGAAATGACGCCTCCACCGGAAGATATGGAAGTCACGGAGGAGGATGCAAAGGTGTTCGCAGAGGAGGGTCGTAAGCTGGGCAATTCGTCAGCCGCCCCTGAAGACAAACCCTTGTACGGGTTAATCCTTACACCGACTCGTGAATTAGCGGTACAGATTAACGATCATCTGAAGGCGGTCGCTAAGTATACCGACATTAACATTGCGACCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCGCAAATGTCCGG ]
[+] EMBL BX627494 [ CCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCGCAAATGTCCGGAGATAGTGATCGCAACGCCGGGTCGGCTGTGGGAGCTGGTCAAGAGTGAAAATCATCACCTTTCCAAGGTGACAGACATCAGATATCTCGTTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTTGGACATTCCGAACGTGGACCACGTCA ]
[+] EMBL BX620838 [ GGCTGTGGGAGCTGGTTAAGAGTGAAAATCATCACCTTTCCAAGGTGGCAGACATCAGATATCTCGTTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGACGGACCATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGGCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTTGGACATTNCGAACGTGGACCACGTCA ]
[+] EMBL BM611027 [ ccgATCACCTTTCCAAGGTGACAGACATCAGATATCTCGTTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCA ]
[+] EMBL BX620066 [ GCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCGTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGTTTGGACATTCCGAACGTGGACCACGTCATCCACTATCAGGTGCCGAAGACGACGGAAAACTATGTGCACCGTTCGGGGCGTACGGCACGCGCAAGCAAGGAAGGTTTGACGGTGCTGCTGATTGGACCGTCCGANGTGAGGGACTACGTTAAGCTGAACCAAGATTTGGGCCGCACGGAGGATCTGCCACT]
consensusID : consensus_7124#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 570 fasta sequence
[ATCGGCCAGGCTNTATTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCCTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTG]
[+] EMBL AL932850 [ATCGGCCAGGCTNTATTATCGATGAAACAGATCGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCCAACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGACCATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTAACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATCGTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGCCAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGTCGAACGCTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCCTTTCTCTGTTCGACTATCTGAACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTGGAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7124#0 CCGCCCACGCGTCCGAAAGACCCTTGCCTTCGGTATACCGATGCTAGAAGGTATCATGCG 60
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 TCTGAAGAAGGGCAAGAAACCGGTGGCAGACGATTCGAGCGAGCACGAAATGACGCCTCC 120
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 ACCGGAAGATATGGAAGTCACGGAGGAGGATGCAAAGGTGTTCGCAGAGGAGGGTCGTAA 180
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 GCTGGGCAATTCGTCAGCCGCCCCTGAAGACAAACCCTTGTACGGGTTAATCCTTACACC 240
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 GACTCGTGAATTAGCGGTACAGATTAACGATCATCTGAAGGCGGTCGCTAAGTATACCGA 300
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 CATTAACATTGCGACCGTGTTCGGTGGTTTGGCCACGGTGAAGCAGGAACGCATGCTGCG 360
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 CAAATGTCCGGAGATAGTGATCGCAACGCCGGGTCGGCTGTGGGAGCTGGTCAAGAGTGA 420
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 AAATCATCACCTTTCCAAGGTGACAGACATCAGATA--TCTCGTTATCGATGAAACAGAT 478
consensus_7124#1 ----------------------------ATCGGCCAGGCTNTATTATCGATGAAACAGAT 32
*** * * *****************
consensus_7124#0 CGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCC 538
consensus_7124#1 CGAATGCTGGAAAAGGGACACTTTGAGGAGCTGAAGGAACTGCTGGCCCTGATCAACGCC 92
************************************************************
consensus_7124#0 AACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGAC 598
consensus_7124#1 AACGAGGAGGCAAAGAAGCTTCGTCGGAACTATATCTTCTCTGCCACGCTTACGATGGAC 152
************************************************************
consensus_7124#0 CATGAGATGCCTACTCATATAAAACGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTA 658
consensus_7124#1 CATGAGATGCCTACTCATATAAAAAGACATCCTAAGAAGTCGAAAAAAGCGCTCAAACTA 212
************************ ***********************************
consensus_7124#0 ACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATC 718
consensus_7124#1 ACGCCCGGCCAGCGTATGGCGAATCTAATCGAAACCATCGGTATGACCGATCCGAAGATC 272
************************************************************
consensus_7124#0 GTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGC 778
consensus_7124#1 GTCGACCTTACGCAAGACCACGGCACTGCTCGTACGCTAACCGAATCGCGTATCCTGTGC 332
************************************************************
consensus_7124#0 CAGATGGAGCACAAAGACTTTTATCTGTACTACTTTCTCGATCGTCATCCCGGTCGAACG 838
consensus_7124#1 CAGATGGAGCACAAAGACTTTTATCTGTACTACTTCCTCGATCGTCATCCCGGTCGAACG 392
*********************************** ************************
consensus_7124#0 CTCGTGTTCTGCAACTCGATCGACTGCGTGAAACGGCTCGTTTCTCTGTTCGACTATCTG 898
consensus_7124#1 CTCGTGTTCTGCAACTCGATCGACTGCGTGAAGCGGCTCCTTTCTCTGTTCGACTATCTG 452
******************************** ****** ********************
consensus_7124#0 AACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTG 958
consensus_7124#1 AACTGCCAGCCGCTTAGTCTGTTTGGAAGCATGCAGCAGCGCCAGCGGCTGAAGAATCTG 512
************************************************************
consensus_7124#0 GAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTGGT 1018
consensus_7124#1 GAGCGTTTTACGGCCAACCCACGGGCACTGCTGATTGCGACCGATGTAGCCGCGCGTG-- 570
**********************************************************
consensus_7124#0 TTGGACATTCCGAACGTGGACCACGTCATCCACTATCAGGTGCCGAAGACGACGGAAAAC 1078
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 TATGTGCACCGTTCGGGGCGTACGGCACGCGCAAGCAAGGAAGGTTTGACGGTGCTGCTG 1138
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 ATTGGACCGTCCGANGTGAGGGACTACGTTAAGCTGAACCAAGATTTGGGCCGCACGGAG 1198
consensus_7124#1 ------------------------------------------------------------
consensus_7124#0 GATCTGCCACT 1209
consensus_7124#1 -----------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||