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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7135#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 970 fasta sequence
[CCGCGGACGCGTGGGCAGCGAGGGACAGAAGTCGATTTCCCGGCCTTTCATCGCAAGCAACATTCGATTGCATTTCCCAAACACTCATCCCGTGTAAAACCACCTCACTTTACATCCACAATGGCCGTCTGGGAAGGAAAGAAGTACAAGATGGAGAAGTCGGAGGGATTCGATGACTACATGAAGGCTCTCGGTGTCGGCATGGTGCTTCGCAAGCTTGGCAACAGCATCTCGCCCACGGTGGAGCTCGTGAAGAACGGTGACGAGTACACGTTCAACACGCTGTCCACCTTCAAGAACACGACGATCAAGTTCAAGCTGGGCGAGGAGTTCGACGAGGAAACCGTCGATGGACGTATGGTCAAGTCGGTCTGCACCTTCGATGGCAACAAGCTGATCCACGAGCAGAAGGGCGAGAAGCCGACCACGATCGTGCGCGAGTTCACTGCCACCGATCTGACCGCCACCATGACTGCCGGCAACGCCAAGTGCGTCCGCTACTACAAGGCCGTCTAAGAAGGACCGACCGACCGAGCGAGCGAGC---TTCTCCGCCGGAGCAACTACACTCGATCTGTGACCGAGTGGACCTTTGCTTTACCATCAGGACATCACATTTCCAGCATCATTCGCATTTAGATTCTACTGCATGGAGAGGACGTAGCAACT----AACAGACTAAACGGAGAAACACACACAGACACAGAACCCTTGCGGGTGAGGAGCCTGCAGACATGCGGTTGCAAAAGGATGTGTGCGTGCGTGTGTGACTGTATTTATAAGAGACCATCGCGGTGTGGTCGTGGAGCACGTGTGTACGTGTGTGCGTGTGCACGTACCGAAGAAGCAAACAATAGCGATAGTGCGTTTTGCTCATTTGCGATCGTTTATGTATATATTTCGTACGAAATATTATGATTTGATCATAATCCTCAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGG]
[+] EMBL BM596596 [CCGCGGACGCGTGGGCAGCGAGGGACAGAAGTCGACTTCCCGGCCTTTCATCGCAAGCAACATTCGATTGCATTTCCCAAACACTCATCCCGTGTAAAACCACCTCACTTTACATCCACAATGGCCGTCTGGGAAGGAAAGAAGTACAAGATGGAGAAGTCGGAGGGATTCGATGACTACATGAAGGCTCTCGGTGTCGGCATGGTGCTTCGCAAGCTTGGCAACAGCATCTCGCCCACAGTGGAGCTCGTGAAGAACGGTGACGAGTACACGTTCAACACGCTGTCCACCTTCAAGAACACGACGATCAAGTTCAAGCTGGGCGAGGAGTTCGACGAGGAAACCGTCGATGGACGTATGGTCAAGTCGGTCTGCACCTTCGATGGCAACAAGCTGATCCACGAGCAGAAGGGCGAGAAGCCGACCACGATCGTGCGCGAGTTCACTGCCACCGATCTGACCGCCACCATGACTGCCGGCAACGCTAAGTGCGTCCGCTACTACAAGGCCGTCTAAGAAGGACCGACCGACCGAGCGAGCGAGCGAGCTCTCCGCCGGAGCAACTACACTCGATCTGTGACCGAGTGGACCTTTGCTTTACCATCAGGACATCACATTTCCAGCATCATTCGCATTTAGATTCTACTGCATGGAGAGGA ]
[+] EMBL CNS09NPY [ caCAGCGAGGGACAGAAGTCGATTTCCCGGCCTTTCATCGCAAGCAACATTCGATTGCATTTCCCAAACACTCATCCCGTGTAAAACCACCTCACTTTACATCCACAATGGCCGTCTGGGAAGGAAAGAAGTACAAGATGGAGAAGTCGGAGGGATTCGATGACTACATGAAGGCTCTCGGTGTCGGCATGGTGCTTCGCAAGCTTGGCAGCAGCATCTCGCCCACGGTGGAGCTCGTGAAGAACGGTGACGAGTACACGTTCAACACGCTGTCCACCTTCAAGAACACGACGATCAAGTTCAAGCTGGGCGAGGAGTTCGACGAGGAAACCGTCGATGGACGTATGGTCAAGTCGGTCTGCACCTTCGATGGCAACAAGCTGATCCACGAGCAGAAGGGCGAGAAGCCGACCACGATCGTGCGCGAGTTCACTGCCACCGATCTGACCGCCACCATGACTGCCGGCAACGCCAAGTGCGTCCGCTACTACAAGGCCGTCTAAGAAGGACCGACCGACCGAGCGAGCGAGC TTCTCCGCCGGAGCAACTACACTCGATCTGTGACCGAGTGGACCTTTGCTTTACCATCAGGACATCACATTTCCAGCATCATTCGCATTTAGATTCTACTGCATGGAGAGGACGTAGCAACT AACAGACTAAACGGAGAAACACACACAGACACAGAACCCTTGCGGGTGAGGAGCCTGCAGACATGCGGTTGCAAAAGGATGTGTGCGTGCGTGTGTGACTGTATTTATAAGAGACCATCGCGGTGTGGTCGTGGAGCACGTGTGTACGTGTGTGCGTGTGCACGTACCGAAGAAGCAAACAATAGCGATAGTGCGTTTTGCTCATTTGCGATCGTTTATGTATATATTTCGTACGAAATATTATGATTTGATCATAATCCTC AAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGG]
[+] EMBL CNS09JRO [ ACAGAAGTCGATTTCCCGGCCTTTCATCGCAAGCAACATTCGATTGCATTTCCCAAACACTCATCCCGTGTAAAACCACCTCACTTTACATCCACAATGGCCGTCTGGGAAGGAAAGAAGTACAAGATGGAGAAGTCGGAGGGATTCGATGACTACATGAAGGCTCTCGGTGTCGGCATGGTGCTTCGCAAGCTTGGCAACAGCATCTCGCCCACGGTGGAGCTCGTGAAGAACGGTGACGAGTACACGTTCAACACGCTGTCCACCTTCAAGAACACGACGATCAAGTTCAAGCTGGGCGAGGAGTTCGACGAGGAAACCGTCGATGGACGTATGGTCAAGTCGGTCTGCACCTTCGATGGCAACAAGCTGATCCACGAGCAGAAGGGCGAGAAGCCGACCACGATCGTGCGCGAGTTCACTGCCACCGATCTGACCGCCACCATGACTGCCGGCAACGCCAAGTGCGTCCGCTACTACAAGGCCGTCTAAGAAGGACCGACCGACCGAGCGAGCGAGC TTCTCCGCCGGAGCAACTACACTCGATCTGTGACCGAGTGGACCTTTGCTTTACCATCAGGACATCACATTTCCAGCATCATTCGCATTTAGATTCTACTGCATGGAGAGGACGTAGCAACT AACAGACTAAACGGAGAAACACACACAGACACAGAACCCTTGCGGGTGAGGAGCCTGCAGACATGCGGTTGCAAAAGGATGTGTGCGTGCGTGTGTGACTGTATTTATAAGAGACCATCGCGGTGTGGTCGTGGAGCACGTGTGTACGTGTGTGCGTGTGCACGTACCGAAGAAGCAAACAATAGCGATAGTGCGTTTTGCTCATTTGCGATCGTTTATGTATATATTTCGTACGAAATATTATGATTTGATCATAATCCTCAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCc ]
[+] EMBL CNS09F0V [ CCGGCC TTCATCGCAAGCAACATTCGATTGCATTTCCCAAACACTCATCCCGTGTAAAACCACCTCACTTTACATCCACAATGGCCGTCTGGGAAGGAAAGAAGTACAAGATGGAGAAGTCGGAGGGATTCGATGACTACATGAAGGCTCTCGGTGTCGGCATGGTGCTTCGCAAGCTTGGCAACAGCATCTCGCCCACGGTGGAGCTCGTGAAGAATGGTGACGAGTACACGTTCAACACGCTGTCCACCTTCAAGAACACGACGATCAAGTTCAAGCTGGGCGAGGAGTTCGACGAGGAAACCGTCGATGGACGTATGGTCAAGTCGGTCTGCACCTTCGATGGCAACAAGCTGATCCACGAGCAGAAGGGCGAGAAGCCGACCACGATCGTGCGCGAGTTCACTGCCACCGATCTGACCGCCACCATGA TGCCGGCAACGCCAAGTGCGTCCGCTACTACAAGGCCGTCTAAGAAG GACCGACCGAGCGAGCGAGC TTCTCCGCCGGAGCAACTACACTCGATCTGTGACCGAGTGGACCTTTGCTTTACCATCAGGACATCACATTTCCAGCATCATTCGCATTTAGATTCTACTGCATGGAGAGGACGTAGCAACTAACAAACAGACTAAACGGAGAAACACTCACAGACACAGAACCCTTGCGGGTGAGGAGCCTGCAGACATGCGGTTGCAAAAGGATGTGTGCGTGCGTGTGTTACTGTATTTATAAGAGACCATCGCGGTGTGGTCGTGGAGCACGTGTGTTCGTGTGTGCGTGTGCACGTACCGAAGAAGCGAACAATAGCGATAGTGCGTTTTGCTCATTTGCGATCGGTTATGTATATATTTCGTACGAAATATTATGATTTGATCATAATCCTCAAAAAAAAAAAAAAAAAGGCCACAT ]
consensusID : consensus_7135#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 654 fasta sequence
[CCGCCCACGCGTCCGACCGGTCGACCTAGATTAGGCTACACAAGCTTCATAATACGAAACCCCACAAACGCTACACAAAATGTATCATAAACGTACAAAAAGGTTTTATTTTCACTCCTGTTTTCTGCTTCGTTGTCTTTCCCTCGATAGTTTGCTAAATTCTACAATTATAATTCTACATTTCCCGCTGGTTGAAACAACGCTTCAAGCCAGAGGATTAACAAACAATTCAGAGGTAACGGAACCCTAACTTCCAACCCCCCTTTTTGCTTAGCAAGAAGGGTAACGTGTTTACACACACATAGTGGGCGCATCAGAATGCTTTCATGGACGTATTATTGGCGGATCGTATCCCTCGCTCCCGGAGGATCTATCTCACAAGATGGCGAGAAACCACGTACCGATCGCTGTATATTCGCAGCATCGGAAGACATGGAATCGATGCGGAACCATGAGCAGATCTTTATGCGGCTTATGCGTCGATACAAGTATCTCGAGAAAATGTTTGAAGAGGAGATGAAGAAAATTCTCATCTTCATCAAGGGTGTTACTCCACTCGAAAGGATCAAGCTCGCTCGCATGACGGCTCTATGGATGGCCAATGGTTCCATTCCGCCGCAAGTGTTGAGCGTACTGGACCATGAACACCTGACG]
[+] EMBL BM590467 [CCGCCCACGCGTCCGACCGGTCGACCTAGATTAGGCTACACAAGCTTCATAATACGAAACCCCACAAACGCTACACAAAATGTATCATAAACGTACAAAAAGGTTTTATTTTCACTCCTGTTTTCTGCTTCGTTGTCTTTCCCTCGATAGTTTGCTAAATTCTACAATTATAATTCTACATTTCCCGCTGGTTGAAACAACGCTTCAAGCCAGAGGATTAACAAACAATTCAGAGGTAACGGAACCCTAACTTCCAACCCCCCTTTTTGCTTAGCAAGAAGGGTAACGTGTTTACACACACATAGTGGGCGCATCAGAATGCTTTCATGGACGTATTATTGGCGGATCGTATCCCTCGCTCCCGGAGGATCTATCTCACAAGATGGCGAGAAACCACGTACCGATCGCTGTATATTCGCAGCATCGGAAGACATGGAATCGATGCGGAACCATGAGCAGATCTTTATGCGGCTTATGCGTCGATACAAGTATCTCGAGAAAATGTTTGAAGAGGAGATGAAGAAAATTCTCATCTTCATCAAGGGTGTTACTCCACTCGAAAGGATCAAGCTCGCTCGCATGACGGCTCTATGGATGGCCAATGGTTCCATTCCGCCGCAAGTGTTGAGCGTACTGGACCATGAACACCTGACG]
consensusID : consensus_7135#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 634 fasta sequence
[CCGCGGACGCGTGGGCGGAACTGGATGCTGTTCGGCTTGAAGTCACCGGAACGCGGTTCTTCCCCGTGAGGAATGGGTTTTCCCATGTGGTCTTTCCCTGTTTGTTGCCTTCTCAGTGTACAACAAGTACACCGAACCTCAACATCATAAAAAGTGAAGAAAGGAAGAATGTAACACAAACAAACACAGTCTAATTACATCGCTACAAGAAAACACAAGGAAGAACAAAAAAGTACGAAACGGAAACAAAGTGTATTTAGATTGAAAACTGTTACGAAGAAGAAGAAAGATTCGTGTTTTGTTGTGAGAGGAAGCTTTAAACAACAGCAAGGAAGATCCTGTGCTACCGTTAACTAGCTAAAACACCTACTATCTACCTTTTAAAACAAAACACCCTGATACCATACAATTACTTTTACCGATAAGTTACAAAGTGGAACCAACCATCTTTTGTTAGTGACACAATCACAACACAAGCTGTGACTCCTTTCCGTGTTGATCCTTTTGCCACCACCCGCCCCCTGTTGGACAGCAATATTAAGAAGGGTTCTGGGAGGGAGCAGGAGGGCACACGAAGGAAGAGAAGCAGCAGAAAACCTCTATTGCCCGCAGAGTAGCAAACACTACATCCATC]
[+] EMBL BM603768 [CCGCGGACGCGTGGGCGGAACTGGATGCTGTTCGGCTTGAAGTCACCGGAACGCGGTTCTTCCCCGTGAGGAATGGGTTTTCCCATGTGGTCTTTCCCTGTTTGTTGCCTTCTCAGTGTACAACAAGTACACCGAACCTCAACATCATAAAAAGTGAAGAAAGGAAGAATGTAACACAAACAAACACAGTCTAATTACATCGCTACAAGAAAACACAAGGAAGAACAAAAAAGTACGAAACGGAAACAAAGTGTATTTAGATTGAAAACTGTTACGAAGAAGAAGAAAGATTCGTGTTTTGTTGTGAGAGGAAGCTTTAAACAACAGCAAGGAAGATCCTGTGCTACCGTTAACTAGCTAAAACACCTACTATCTACCTTTTAAAACAAAACACCCTGATACCATACAATTACTTTTACCGATAAGTTACAAAGTGGAACCAACCATCTTTTGTTAGTGACACAATCACAACACAAGCTGTGACTCCTTTCCGTGTTGATCCTTTTGCCACCACCCGCCCCCTGTTGGACAGCAATATTAAGAAGGGTTCTGGGAGGGAGCAGGAGGGCACACGAAGGAAGAGAAGCAGCAGAAAACCTCTATTGCCCGCAGAGTAGCAAACACTACATCCATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7135#1 ------------------------------------------------------------
consensus_7135#0 CCGCGGACGCGTGGGCAGCGAGGGACAGAAGTCGATTTCCCGGCCTTTCATCGCAAGCAA 60
consensus_7135#2 ------------------------------------------------------------
consensus_7135#1 ------------------------------------------------------------
consensus_7135#0 CATTCGATTGCATTTCCCAAACACTCATCCCGTGTAAAACCACCTCACTTTACATCCACA 120
consensus_7135#2 ------------------------------------------------------------
consensus_7135#1 ------------------------------------------------------------
consensus_7135#0 ATGGCCGTCTGGGAAGGAAAGAAGTACAAGATGGAGAAGTCGGAGGGATTCGATGACTAC 180
consensus_7135#2 ------------------------------------------------------------
consensus_7135#1 ------------------------------------------------------------
consensus_7135#0 ATGAAGGCTCTCGGTGTCGGCATGGTGCTTCGCAAGCTTGGCAACAGCATCTCGCCCACG 240
consensus_7135#2 ------------------------------------------------------------
consensus_7135#1 -------CCGCCCACGCGTCCGACCGGTCGACCTAGATTAGGCTACACAAGCTTCATAAT 53
consensus_7135#0 GTGGAGCTCGTGAAGAACGGTGACGAGTACACGTTCAACACGCTGTCCACCTTCAAGAAC 300
consensus_7135#2 -------CCGCGGACGCGTGGGCGGAACTGGATGCTGTTCGGCT-TGAAGTCACCGGAAC 52
** * * *** * **
consensus_7135#1 ACGA-AACCCCACAAACGCTACACAAAATGTATCATAAACGTACAA--AAAGGTTTTATT 110
consensus_7135#0 ACGACGATCAAGTTCAAGCTGGGCGAGGAGTTCGACGAGGAAACCGTCGATGGACGTATG 360
consensus_7135#2 GCGG--TTCTTCCCCGTGAGGAATGGGTTTTCCCATGTGGTCTTTC----CCTGTTTGTT 106
** * * * * * *
consensus_7135#1 TTCACTCCTGTTTTCTGCTTCGTTGTC-------TTTCCCTCGA-TAGTTTGCTAA--AT 160
consensus_7135#0 GTCAAGTCGGTCTGCACCTTCGATGGCAACAAGCTGATCCACGAGCAGAAGGGCGAGAAG 420
consensus_7135#2 GCCTTCTCAGTGTACAACAAGTACACCGA-----ACCTCAACATCATAAAAAGTGAAGAA 161
* * ** * * * * * * * *
consensus_7135#1 TCTACAATTATAATTCTACATTTC----CCGCTGGTTGAAACAACGCTTCAAG-CCAGAG 215
consensus_7135#0 CCGACCACGATCGTGCGCGAGTTCACTGCCACCGATCTGACCGCCACCATGAC-TGCCGG 479
consensus_7135#2 AGGAAGAATGTAACACAAACAAACAC--AGTCTAATTACATCGCTACAAGAAAACACAAG 219
* * * * * * * * * * * *
consensus_7135#1 GATTAACAAACAATTCAGAGGTAACGGAACCCTAACTTCCAACCCCCCTTTTTGCTTAGC 275
consensus_7135#0 CAACGCCAAGTGCGTCCGCTACTACAAGGCC---GTCTAAGAAGGACCGACCGACCGAGC 536
consensus_7135#2 GAAGAACAAAAAAGTACGAAACGGAAACAAAGTGTATTTAGATTGAAAACTGTTACGAAG 279
* *** * * * * *
consensus_7135#1 AAGAAGGGTAACGTGTTTACACACACATAGTGGGCGCATCA--GAATGCTTTCATGGACG 333
consensus_7135#0 GAGCGAGCTTCTCCGCCGGAGCAACTACACTCGATCTGTGACCGAGTGGAC-CTTTGCTT 595
consensus_7135#2 AAGAAGAAAGATTCGTGTTTTGTTGTG-AGAGGAAGCTTTAAACAACAGCAAGGAAGATC 338
** * * * * * * *
consensus_7135#1 TATTATTGGCGGATCGTATCCCTCGCTCCCGGAGGATCTA--TCTCACAAGATGGCGAGA 391
consensus_7135#0 TACCATCAGGACATCACATTTCCAGCATCATTCGCATTTAGATTCTACTGCATGGAGAGG 655
consensus_7135#2 CTGTGCTACCG--TTAACTAGCTAAAACACCTACTATCTACCTTTTAAAACAAAACACCC 396
* * * ** ** * * *
consensus_7135#1 AACCACGTACCGATCGCTGTATATTCGCAGCATCGGAAGACATGGAATCGATGCGGAACC 451
consensus_7135#0 ACGTAGCAACTAACAGACTAAACGGAGAAACACACACAGACACAGAACCCTTGCGGG-TG 714
consensus_7135#2 TGATACCATACAATTACTTTTACCGATAAGTTACAAAGTGGAACCAACCATCTTTTGTTA 456
* * * * ** *
consensus_7135#1 ATGAGCAGATCTTTATGCGGCT---------------TATGCGTCGATACAAGTATCTCG 496
consensus_7135#0 AGGAGCCTGCAGACATGCGGTTGCAAAAGGATGTGTGCGTGCGTGTGTGACTGTATTTAT 774
consensus_7135#2 GTGACACAATCACAACACAAGCT----GTGACTCCTTTCCGTGTTGATCCTTTTGCCACC 512
** * * * ** * *
consensus_7135#1 AGAAAATGTTTGAAGAGGAGATGAAGAAAATTCTCATCTTCAT-CAAGGGTGTTACTCCA 555
consensus_7135#0 AAGAGACCATCGCGGTGTGGTCGTGGAGCACGTGTGTACGTGTGTGCGTGTGCACGTACC 834
consensus_7135#2 ACCCGCCCCCTGTTGGACAGCAATATTAAGAAGGGTTCTGGGAGGGAGCAGGAGGGCACA 572
* * * * * * * *
consensus_7135#1 CTCGAAAGGATCAAGCTCGCT--CGCATGACGGCTCTATG-GATGGCCAATGGTTCCATT 612
consensus_7135#0 GAAGAAGCAAACAATAGCGATAGTGCGTTTTGCTCATTTGCGATCGTTTATGTATATATT 894
consensus_7135#2 CGAAGGAAGAGAAGCAGCAGAAAACCTCTATTGCCCGCAG-AGTAGCAAACA-CTACATC 630
* * * * * * * * * **
consensus_7135#1 CCGCCGCAAGTGTTGAGCGTACTGGACCATGAACACCTGACG------------------ 654
consensus_7135#0 TCGTACGAAATATTATG---ATTTGATCATAATCCTCAAAAAAAAAAAAAAAAAGGCCAC 951
consensus_7135#2 CATC-------------------------------------------------------- 634
consensus_7135#1 -------------------
consensus_7135#0 ATGTGCTCGAGCTGCAGGG 970
consensus_7135#2 -------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||