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Anopheles gambiae
cluster # 7169 cluster # 7169       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7169#0 length = 1074 sequences # 1  
consensus_7169#1 length = 1038 sequences # 2  
consensus_7169#2 length = 936 sequences # 1  
consensus_7169#3 length = 820 sequences # 1  
consensus_7169#4 length = 505 sequences # 1  

consensusID : consensus_7169#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1074
fasta sequence
                              [GCAGAATCGCCACGAGGTACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATCACGAACACGCTGAACAGCCTGCTCGGCGGTGTCACCACCAACCTGAACACCATCGGTTCCGGACTGTCAGGAGCACCGACCGCAGCCAACGGTCAGATCGTCACCAACGCGCTGAACAACGTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGACCGTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCATCCAGGCGATCAACAACGCCACCGCTAACCCCGGTACGGCACCACCCTGCTCGGTGCGCTCGGCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCATCGCGAACGTTGCCCCGGCGACCAATGCCGGCCCTGACGCAGGGCATTCACCAAGCATCAACAACGCGCTGACCCTCGGTCAAACAGGCGTTGCTTGGAACCCTTGTTCGGCCGGCCCAGACGAAAGGGCAAGCGTGACGGGCCGCGGCAACACGGGGCATTCAGGAACCTTGACCAAGGCTTGGTGTNGANGGCTTTCCAAGTTCGAAAACCTTTNNCGGTCCNTTGAACCACGGGTTTTAAACCACCCTTTAAAATTTTCCCCGTTCGACCACCTTCTNGNGGAAAAAAGCGCCTTTCACATTCATTTCCGCGGGCCAAAAACCNGTCCCCGCCCCGTTTAATCTCTCNAACACCCAAANTATNTGGCCCAACCACCTTGNGGCACCACAACATAACACCGCAAACACACATTTTTTGAAACCTTCGTCCCCCGNGGAACANTNCCNCTTCGNCCACTTANACATCGANCCCA]

[+] EMBL BX467497             [GCAGAATCGCCACGAGGTACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATCACGAACACGCTGAACAGCCTGCTCGGCGGTGTCACCACCAACCTGAACACCATCGGTTCCGGACTGTCAGGAGCACCGACCGCAGCCAACGGTCAGATCGTCACCAACGCGCTGAACAACGTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGACCGTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCATCCAGGCGATCAACAACGCCACCGCTAACCCCGGTACGGCACCACCCTGCTCGGTGCGCTCGGCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCATCGCGAACGTTGCCCCGGCGACCAATGCCGGCCCTGACGCAGGGCATTCACCAAGCATCAACAACGCGCTGACCCTCGGTCAAACAGGCGTTGCTTGGAACCCTTGTTCGGCCGGCCCAGACGAAAGGGCAAGCGTGACGGGCCGCGGCAACACGGGGCATTCAGGAACCTTGACCAAGGCTTGGTGTNGANGGCTTTCCAAGTTCGAAAACCTTTNNCGGTCCNTTGAACCACGGGTTTTAAACCACCCTTTAAAATTTTCCCCGTTCGACCACCTTCTNGNGGAAAAAAGCGCCTTTCACATTCATTTCCGCGGGCCAAAAACCNGTCCCCGCCCCGTTTAATCTCTCNAACACCCAAANTATNTGGCCCAACCACCTTGNGGCACCACAACATAACACCGCAAACACACATTTTTTGAAACCTTCGTCCCCCGNGGAACANTNCCNCTTCGNCCACTTANACATCGANCCCA]


>consensus_7169#0 GCAGAATCGCCACGAGGTACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATC ACGAACACGCTGAACAGCCTGCTCGGCGGTGTCACCACCAACCTGAACACCATCGGTTCC GGACTGTCAGGAGCACCGACCGCAGCCAACGGTCAGATCGTCACCAACGCGCTGAACAAC GTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGACC GTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCATC CAGGCGATCAACAACGCCACCGCTAACCCCGGTACGGCACCACCCTGCTCGGTGCGCTCG GCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACA CTACCGCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGC GAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGC CGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCAT CGCGAACGTTGCCCCGGCGACCAATGCCGGCCCTGACGCAGGGCATTCACCAAGCATCAA CAACGCGCTGACCCTCGGTCAAACAGGCGTTGCTTGGAACCCTTGTTCGGCCGGCCCAGA CGAAAGGGCAAGCGTGACGGGCCGCGGCAACACGGGGCATTCAGGAACCTTGACCAAGGC TTGGTGTNGANGGCTTTCCAAGTTCGAAAACCTTTNNCGGTCCNTTGAACCACGGGTTTT AAACCACCCTTTAAAATTTTCCCCGTTCGACCACCTTCTNGNGGAAAAAAGCGCCTTTCA CATTCATTTCCGCGGGCCAAAAACCNGTCCCCGCCCCGTTTAATCTCTCNAACACCCAAA NTATNTGGCCCAACCACCTTGNGGCACCACAACATAACACCGCAAACACACATTTTTTGA AACCTTCGTCCCCCGNGGAACANTNCCNCTTCGNCCACTTANACATCGANCCCA



consensusID : consensus_7169#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1038
fasta sequence
                              [GGCAGAATCGGCACGAGGACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATCACGAACACGCTGAACAGCCTGCTCGTGCGGTGTCACCACCAACCTGAACACCATCGGTTCCGGACTGTCAGGAGCACCGACCGCAGCCAACGGTCAGATCGTCACCAACGCGCTGAACAACGTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGACCGTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCATCCAGGCGATCAACAACGCCACCGCTAACCCCGGTACGGCCACCACCCTGCTCGGTGCGCTCGGCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACGAACATCATCGCGGAACGTTGCCCCGGCGACCAATGCCGCCCTGACGGCAGGGGCATCACCAAGCATCAACAACGGCGCTGACCTCGGCTCAAGCAGGCGTGCTTGAACCTTGTTCCGCCGGCCAAGACGNAAGGGCAAAGCCGTTGACGGGCCGGACCGACAACAACGGGCAATCAAGGCAAACCTGAACCAGGCCCTGGTGTTCGAACGGCTTCCATTTCAACCCTTGTGCCCGTCCCTTAAACACGTTAATCGCTAAANTTACCCGTGATCCACCCTTTCATGGAAAAAACAGGCCTTTCCCATCTTCGGGGGCAAACACCCAGTTTCNCGCCCTTGTAATTCGGAACCCCNATCTTTTGGCCCAACCNCTTGATCCACNCACGAAACACCNACACATTTTTTACANTCTGATNCCCCCAGAACATTAANCTATCCCATT]

[+] EMBL BX467375             [GGCAGAATCGGCACGAGGACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATCACGAACACGCTGAACAGCCTGCTCGTGCGGTGTCACCACCAACCTGAACACCATCGGTTCCGGACTGTCAGGAGCACCGACCGCAGCCAACGGTCAGATCGTCACCAACGCGCTGAACAACGTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGACCGTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCATCCAGGCGATCAACAACGCCACCGCTAACCCCGGTACGGCCACCACCCTGCTCGGTGCGCTCGGCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACGAACATCATCGCGGAACGTTGCCCCGGCGACCAATGCCGCCCTGACGGCAGGGGCATCACCAAGCATCAACAACGGCGCTGACCTCGGCTCAAGCAGGCGTGCTTGAACCTTGTTCCGCCGGCCAAGACGNAAGGGCAAAGCCGTTGACGGGCCGGACCGACAACAACGGGCAATCAAGGCAAACCTGAACCAGGCCCTGGTGTTCGAACGGCTTCCATTTCAACCCTTGTGCCCGTCCCTTAAACACGTTAATCGCTAAANTTACCCGTGATCCACCCTTTCATGGAAAAAACAGGCCTTTCCCATCTTCGGGGGCAAACACCCAGTTTCNCGCCCTTGTAATTCGGAACCCCNATCTTTTGGCCCAACCNCTTGATCCACNCACGAAACACCNACACATTTTTTACANTCTGATNCCCCCAGAACATTAANCTATCCCATT]
[+] EMBL AL934971             [                                 tTGCCGAGGAACACGCTGTCCACGATCACGAACACGCTGAACAGCCTGCTCG GCGGTGTCACCACCAACCTGAACACCATCGGTTCCGGACTGTCGGGAGCACCGACCGCAGCCAACGGTCAGATCTTCACCAACGCGCTGAACAACGTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGACCGTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCATCCAGGCGATCAACAACGCCACCGCTAACCCCGGCACGGCCACCACCCTGCTCGGTGCGCTCGGCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_7169#1 GGCAGAATCGGCACGAGGACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATC ACGAACACGCTGAACAGCCTGCTCGTGCGGTGTCACCACCAACCTGAACACCATCGGTTC CGGACTGTCAGGAGCACCGACCGCAGCCAACGGTCAGATCGTCACCAACGCGCTGAACAA CGTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGAC CGTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCAT CCAGGCGATCAACAACGCCACCGCTAACCCCGGTACGGCCACCACCCTGCTCGGTGCGCT CGGCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTA CACTACCGCCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGC TGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAA CGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACGAACA TCATCGCGGAACGTTGCCCCGGCGACCAATGCCGCCCTGACGGCAGGGGCATCACCAAGC ATCAACAACGGCGCTGACCTCGGCTCAAGCAGGCGTGCTTGAACCTTGTTCCGCCGGCCA AGACGNAAGGGCAAAGCCGTTGACGGGCCGGACCGACAACAACGGGCAATCAAGGCAAAC CTGAACCAGGCCCTGGTGTTCGAACGGCTTCCATTTCAACCCTTGTGCCCGTCCCTTAAA CACGTTAATCGCTAAANTTACCCGTGATCCACCCTTTCATGGAAAAAACAGGCCTTTCCC ATCTTCGGGGGCAAACACCCAGTTTCNCGCCCTTGTAATTCGGAACCCCNATCTTTTGGC CCAACCNCTTGATCCACNCACGAAACACCNACACATTTTTTACANTCTGATNCCCCCAGA ACATTAANCTATCCCATT



consensusID : consensus_7169#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 936
fasta sequence
                              [GGCAGAATCGGCACGAGGCACCTGCTCGGTGCGCTCGGCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCATCGCGAACGTTGCCCCGGCGACCAATGCCGCCCTGACGCAGGGCATCACCAACATCAACAACGCGCTGACCTCGCTCAACAGCGTGCTGAACCTGTTCGCCGGCCAGACGAAGGCAAGCGTGACGGCCGCCGCCAACACGGCCATCAGCAACCTGACCAGCCTGGTGTCGACGCTCCAGTCGAGCCTGGCCGTCCTGAACACGGTGACGCTAATGCCGTCGCCTCGGCGAACGCCTCCATCTCGGGCAACGCGTCCGCCGTGATCGGACCGATCGTGGCCAACCTGGCCAGCACGAACGCGACCATTGTGAACTGCTCCCGGACCTACCTGCCGCTGGCCGTGCGCACGGACGTGTTCTACACGACCGCCCTCGGTGGGCTGCGTAGTGGACGCGACCCAACGTGGTGAACATCCTGGTCGGGCAACACGATCGCGGGTCCGTCAACCTTCGGGCCGGTCACCCGTGTCCGCGAACTTCGACCGGGCCCAAAGACGATTCAAGCCTTTTGCCCATTTGCNGTCACACTCACTTCCCGNTCCAAAGCTTCTCTTTNCCAAACCCCGGGAACACGTGCTCCAAAACCACCCGGGGCCTTACATTTACCAAACCCGCTTTGCGCCCTCAAATNTTTGCCCACAAANTTTNTCAACACACCGG]

[+] EMBL BX467760             [GGCAGAATCGGCACGAGGCACCTGCTCGGTGCGCTCGGCCCGAACGGTATCAGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCATCGCGAACGTTGCCCCGGCGACCAATGCCGCCCTGACGCAGGGCATCACCAACATCAACAACGCGCTGACCTCGCTCAACAGCGTGCTGAACCTGTTCGCCGGCCAGACGAAGGCAAGCGTGACGGCCGCCGCCAACACGGCCATCAGCAACCTGACCAGCCTGGTGTCGACGCTCCAGTCGAGCCTGGCCGTCCTGAACACGGTGACGCTAATGCCGTCGCCTCGGCGAACGCCTCCATCTCGGGCAACGCGTCCGCCGTGATCGGACCGATCGTGGCCAACCTGGCCAGCACGAACGCGACCATTGTGAACTGCTCCCGGACCTACCTGCCGCTGGCCGTGCGCACGGACGTGTTCTACACGACCGCCCTCGGTGGGCTGCGTAGTGGACGCGACCCAACGTGGTGAACATCCTGGTCGGGCAACACGATCGCGGGTCCGTCAACCTTCGGGCCGGTCACCCGTGTCCGCGAACTTCGACCGGGCCCAAAGACGATTCAAGCCTTTTGCCCATTTGCNGTCACACTCACTTCCCGNTCCAAAGCTTCTCTTTNCCAAACCCCGGGAACACGTGCTCCAAAACCACCCGGGGCCTTACATTTACCAAACCCGCTTTGCGCCCTCAAATNTTTGCCCACAAANTTTNTCAACACACCGG]


>consensus_7169#2 GGCAGAATCGGCACGAGGCACCTGCTCGGTGCGCTCGGCCCGAACGGTATCAGCTCGATC GCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATCCCGCTGCAG CTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACC CCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAAC GTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCATCGCGAACGTTGCCCCGGCGACC AATGCCGCCCTGACGCAGGGCATCACCAACATCAACAACGCGCTGACCTCGCTCAACAGC GTGCTGAACCTGTTCGCCGGCCAGACGAAGGCAAGCGTGACGGCCGCCGCCAACACGGCC ATCAGCAACCTGACCAGCCTGGTGTCGACGCTCCAGTCGAGCCTGGCCGTCCTGAACACG GTGACGCTAATGCCGTCGCCTCGGCGAACGCCTCCATCTCGGGCAACGCGTCCGCCGTGA TCGGACCGATCGTGGCCAACCTGGCCAGCACGAACGCGACCATTGTGAACTGCTCCCGGA CCTACCTGCCGCTGGCCGTGCGCACGGACGTGTTCTACACGACCGCCCTCGGTGGGCTGC GTAGTGGACGCGACCCAACGTGGTGAACATCCTGGTCGGGCAACACGATCGCGGGTCCGT CAACCTTCGGGCCGGTCACCCGTGTCCGCGAACTTCGACCGGGCCCAAAGACGATTCAAG CCTTTTGCCCATTTGCNGTCACACTCACTTCCCGNTCCAAAGCTTCTCTTTNCCAAACCC CGGGAACACGTGCTCCAAAACCACCCGGGGCCTTACATTTACCAAACCCGCTTTGCGCCC TCAAATNTTTGCCCACAAANTTTNTCAACACACCGG



consensusID : consensus_7169#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 820
fasta sequence
                              [AGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCATCGCGAACGTTGCCCCGGCGACCAATGCCGCCCTGACGCAGGGCATCACCAACATCAACAACGCGCTGACCTCGCTCAACAGCGTGCTGAACCTGTTCGCCGGCCAGACGAAGGCAAGCGTGACGGCCGCCGCCAACACGGCCATCAGCAACCTGACCAGCCTGGTGTCGACGCTCCAGTCGAGCCTGGCCGTCCTGAACACGGTGACGCTGAATGCCGTCGCCTCGGCGAACGCCTCCATCTCGGGCAACGCGTCCGCCGTGATCGGACCGATCGTGGCCAACCTGGCCAGCACGAACGCGACCATTGTGAACTGCTCCCGGACCTACCTGCCGCTGGCCGTGCGCACGGACGTGTTCTACACGACCGCCCTCGGTGGCTGCGTAGTGGACGCGACCAACGTGGTGAACATCCTGGTCGGCAACACGATCGCGGTCGTCAACTCGGNCGTCACCCGTGTCCGCACCTCGACGGCCAGCGTCAGCGTGTGCATTGCGTCGCTCTTCCCGTCCACGCTCTGCCAGACCGCGACCGTGCCGAACGCACCNGGCTACATTACGAACGTGGCGCTCGATGTGGCCACATCAAGACGGG]

[+] EMBL BX623525             [AGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATCCCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCATCGCGAACGTTGCCCCGGCGACCAATGCCGCCCTGACGCAGGGCATCACCAACATCAACAACGCGCTGACCTCGCTCAACAGCGTGCTGAACCTGTTCGCCGGCCAGACGAAGGCAAGCGTGACGGCCGCCGCCAACACGGCCATCAGCAACCTGACCAGCCTGGTGTCGACGCTCCAGTCGAGCCTGGCCGTCCTGAACACGGTGACGCTGAATGCCGTCGCCTCGGCGAACGCCTCCATCTCGGGCAACGCGTCCGCCGTGATCGGACCGATCGTGGCCAACCTGGCCAGCACGAACGCGACCATTGTGAACTGCTCCCGGACCTACCTGCCGCTGGCCGTGCGCACGGACGTGTTCTACACGACCGCCCTCGGTGGCTGCGTAGTGGACGCGACCAACGTGGTGAACATCCTGGTCGGCAACACGATCGCGGTCGTCAACTCGGNCGTCACCCGTGTCCGCACCTCGACGGCCAGCGTCAGCGTGTGCATTGCGTCGCTCTTCCCGTCCACGCTCTGCCAGACCGCGACCGTGCCGAACGCACCNGGCTACATTACGAACGTGGCGCTCGATGTGGCCACATCAAGACGGG]


>consensus_7169#3 AGCTCGATCGCGACCTTCCTCGGCGATGCGGCCAACGTGCTGTACACTACCGCCAACATC CCGCTGCAGCTGTCCGCGGCCGCACAGGTCAGTGGAGCGCTTGCTGCGAACGCAGCCGTC CCGTACACCCCAGCCGGCATTGCCGCCGTCAACGCGACCGTTAACGCCGCCCTGAACAAC GCCAACAACGTGCTGAACTCGGCGGTCGGTTCGTTCAACAACATCATCGCGAACGTTGCC CCGGCGACCAATGCCGCCCTGACGCAGGGCATCACCAACATCAACAACGCGCTGACCTCG CTCAACAGCGTGCTGAACCTGTTCGCCGGCCAGACGAAGGCAAGCGTGACGGCCGCCGCC AACACGGCCATCAGCAACCTGACCAGCCTGGTGTCGACGCTCCAGTCGAGCCTGGCCGTC CTGAACACGGTGACGCTGAATGCCGTCGCCTCGGCGAACGCCTCCATCTCGGGCAACGCG TCCGCCGTGATCGGACCGATCGTGGCCAACCTGGCCAGCACGAACGCGACCATTGTGAAC TGCTCCCGGACCTACCTGCCGCTGGCCGTGCGCACGGACGTGTTCTACACGACCGCCCTC GGTGGCTGCGTAGTGGACGCGACCAACGTGGTGAACATCCTGGTCGGCAACACGATCGCG GTCGTCAACTCGGNCGTCACCCGTGTCCGCACCTCGACGGCCAGCGTCAGCGTGTGCATT GCGTCGCTCTTCCCGTCCACGCTCTGCCAGACCGCGACCGTGCCGAACGCACCNGGCTAC ATTACGAACGTGGCGCTCGATGTGGCCACATCAAGACGGG



consensusID : consensus_7169#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 505
fasta sequence
                              [AAACGCCTCAATCGCGATGCTGTGGAAGAAGGCCTTCCTGCTTTGCGCTTTGCTGGTCTCCGCCCAGGCGGCACCGCAACTCAGTCTTCTTGGAACGGTGACAAACGGCTTTCTGGGACTGCTAAACAATGTCGCTACCTCATTGATCTCCGGCACCTCGGGCACCCTGAGCGGTAGCCTTAACCTCGGCAACATCGGTGTCGCCGGCAGTGGGACGATCAGCACGAACCTGCCGATACTGAACCTCGTGAACAATGTGGTCTCCTCGACGCTGAACGCGCTGAACACGGCCGTCACCAACATCGGTACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATCACGAACACGCTGAACAGCCTGCTCGGCGGTGTCACCACCAACCTGAACACCATCGGTTNCNGACTGTCGGGGAGCACCGACCGCAGCCAACGGGTCAGATCGTCACCAACGCGCTGAACAACGTGGGCACCGCCGTCAATTCGGGCGTCAGTGCCG]

[+] EMBL BX626897             [AAACGCCTCAATCGCGATGCTGTGGAAGAAGGCCTTCCTGCTTTGCGCTTTGCTGGTCTCCGCCCAGGCGGCACCGCAACTCAGTCTTCTTGGAACGGTGACAAACGGCTTTCTGGGACTGCTAAACAATGTCGCTACCTCATTGATCTCCGGCACCTCGGGCACCCTGAGCGGTAGCCTTAACCTCGGCAACATCGGTGTCGCCGGCAGTGGGACGATCAGCACGAACCTGCCGATACTGAACCTCGTGAACAATGTGGTCTCCTCGACGCTGAACGCGCTGAACACGGCCGTCACCAACATCGGTACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATCACGAACACGCTGAACAGCCTGCTCGGCGGTGTCACCACCAACCTGAACACCATCGGTTNCNGACTGTCGGGGAGCACCGACCGCAGCCAACGGGTCAGATCGTCACCAACGCGCTGAACAACGTGGGCACCGCCGTCAATTCGGGCGTCAGTGCCG]


>consensus_7169#4 AAACGCCTCAATCGCGATGCTGTGGAAGAAGGCCTTCCTGCTTTGCGCTTTGCTGGTCTC CGCCCAGGCGGCACCGCAACTCAGTCTTCTTGGAACGGTGACAAACGGCTTTCTGGGACT GCTAAACAATGTCGCTACCTCATTGATCTCCGGCACCTCGGGCACCCTGAGCGGTAGCCT TAACCTCGGCAACATCGGTGTCGCCGGCAGTGGGACGATCAGCACGAACCTGCCGATACT GAACCTCGTGAACAATGTGGTCTCCTCGACGCTGAACGCGCTGAACACGGCCGTCACCAA CATCGGTACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGATCACGAACACGCT GAACAGCCTGCTCGGCGGTGTCACCACCAACCTGAACACCATCGGTTNCNGACTGTCGGG GAGCACCGACCGCAGCCAACGGGTCAGATCGTCACCAACGCGCTGAACAACGTGGGCACC GCCGTCAATTCGGGCGTCAGTGCCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7169#0      -GCAGAATCGCCACGAGGTACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGAT 59
consensus_7169#1      GGCAGAATCGGCACGAGG-ACGGCGGCGGGCACGCTGCTGACCAACACGCTGTCCACGAT 59
consensus_7169#2      ------------------------------------------------------------
consensus_7169#3      ------------------------------------------------------------
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      CACGAACACGCTGAACAGCCTGCTCG-GCGGTGTCACCACCAACCTGAACACCATCGGTT 118
consensus_7169#1      CACGAACACGCTGAACAGCCTGCTCGTGCGGTGTCACCACCAACCTGAACACCATCGGTT 119
consensus_7169#2      ------------------------------------------------------------
consensus_7169#3      ------------------------------------------------------------
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      CCGGACTGTCAGGAGCACCGACCGCAGCCAACGGTCAGATCGTCACCAACGCGCTGAACA 178
consensus_7169#1      CCGGACTGTCAGGAGCACCGACCGCAGCCAACGGTCAGATCGTCACCAACGCGCTGAACA 179
consensus_7169#2      ------------------------------------------------------------
consensus_7169#3      ------------------------------------------------------------
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      ACGTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGA 238
consensus_7169#1      ACGTGGCCACCGCCGTCAATTCGGCCGTCAGTGCCGCCTCGTCCGTGTTCGGCAACTCGA 239
consensus_7169#2      ------------------------------------------------------------
consensus_7169#3      ------------------------------------------------------------
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      CCGTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCA 298
consensus_7169#1      CCGTTGCTGCCGCGCTGGGCAACCTGACGAACACGCTGAACGCCGATCTGGCCACCGCCA 299
consensus_7169#2      ------------------------------------------------------------
consensus_7169#3      ------------------------------------------------------------
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      TCCAGGCGATCAACAACGCCACCGCTAACCCCGGTACGGC-ACCACCCTGCTCGGTGCGC 357
consensus_7169#1      TCCAGGCGATCAACAACGCCACCGCTAACCCCGGTACGGCCACCACCCTGCTCGGTGCGC 359
consensus_7169#2      -----------------------GGCAGAATCGGCACGAG---GCACCTGCTCGGTGCGC 34
consensus_7169#3      ------------------------------------------------------------
consensus_7169#4      ----------AAACGCCTCAATCGCGATGCTGTGGAAGAAGGCCTTCCTGCTT--TGCGC 48
                                                                                  

consensus_7169#0      TCGGCCCGAACGGTATCAGCTCG-ATCGCGACCT----TCCTCGGCGATGCGGCCAACGT 412
consensus_7169#1      TCGGCCCGAACGGTATCAGCTCG-ATCGCGACCT----TCCTCGGCGATGCGGCCAACGT 414
consensus_7169#2      TCGGCCCGAACGGTATCAGCTCG-ATCGCGACCT----TCCTCGGCGATGCGGCCAACGT 89
consensus_7169#3      -----------------AGCTCG-ATCGCGACCT----TCCTCGGCGATGCGGCCAACGT 38
consensus_7169#4      TTTGCTGGTCTCCGCCCAGGCGGCACCGCAACTCAGTCTTCTTGGAACGGTGACAAACG- 107
                                       **   * * *** **      * ** **    * * * **** 

consensus_7169#0      GCTGTACACTACCGC-AAC--ATCCCGCTGC---AGCTGTCCGCGGCCGCACAGGTCAGT 466
consensus_7169#1      GCTGTACACTACCGCCAAC--ATCCCGCTGC---AGCTGTCCGCGGCCGCACAGGTCAGT 469
consensus_7169#2      GCTGTACACTACCGCCAAC--ATCCCGCTGC---AGCTGTCCGCGGCCGCACAGGTCAGT 144
consensus_7169#3      GCTGTACACTACCGCCAAC--ATCCCGCTGC---AGCTGTCCGCGGCCGCACAGGTCAGT 93
consensus_7169#4      GCTTTCTGGGACTGCTAAACAATGTCGCTACCTCATTGATCTCCGGCACCTCGGGCACCC 167
                      *** *     ** ** **   **  **** *   *    **  ****  * * **     

consensus_7169#0      GGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAAC 526
consensus_7169#1      GGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAAC 529
consensus_7169#2      GGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAAC 204
consensus_7169#3      GGAGCGCTTGCTGCGAACGCAGCCGTCCCGTACACCCCAGCCGGCATTGCCGCCGTCAAC 153
consensus_7169#4      TGAGCGGTAGCCTTAACCTCGGCAACATCG-GTGTC---GCCGGCAGTGGGACGATCAGC 223
                       ***** * **    * * * **     **     *   ******* **   *  *** *

consensus_7169#0      GCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCG 586
consensus_7169#1      GCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCG 589
consensus_7169#2      GCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCG 264
consensus_7169#3      GCGACCGTTAACGCCGCCCTGAACAACGCCAACAACGTGCTGAACTCGGCGGTCGGTTCG 213
consensus_7169#4      ACGAAC-CTGCCGATA--CTGAACCTCGTGAACAATGTGGTCTCCTCGACGCTGAACGCG 280
                       *** *  *  **     ******  **  ***** *** *   **** ** *     **

consensus_7169#0      TTCAAC-AACATCATCGCG-AACGTTGCCCCGGCGACCAATGCCGGCCCTGACG-CAGGG 643
consensus_7169#1      TTCAACGAACATCATCGCGGAACGTTGCCCCGGCGACCAATGCCG-CCCTGACGGCAGGG 648
consensus_7169#2      TTCAAC-AACATCATCGCG-AACGTTGCCCCGGCGACCAATGCCG-CCCTGACG-CAGGG 320
consensus_7169#3      TTCAAC-AACATCATCGCG-AACGTTGCCCCGGCGACCAATGCCG-CCCTGACG-CAGGG 269
consensus_7169#4      CTGAAC-ACGGCCGTCACC-AACATCGGTACGGCGGCGGGCAC-GCTGCTGAC--CAACA 335
                       * *** *    * ** *  *** * *   ***** *     * *   *****  **   

consensus_7169#0      CATTCACCAAGCATCAACAACG-CGCTGACC--CTCGGTCAAACAGGCGTTGCTTGGAAC 700
consensus_7169#1      GCATCACCAAGCATCAACAACGGCGCTGACC--TCGGCTCAAGCAGGCGT-GCTTGAA-- 703
consensus_7169#2      CA-TCACCAA-CATCAACAACG-CGCTGACC--TC-GCTCAACAGCGTGC----TGAA-- 368
consensus_7169#3      CA-TCACCAA-CATCAACAACG-CGCTGACC--TC-GCTCAACAGCGTGC----TGAA-- 317
consensus_7169#4      CGCTGTCCAC-GATCACGAACA-CGCTGAACAGCCTGCTCGGCGGTGT-CACCACCAA-- 390
                         *  ***   ****  ***  ****** *     * **      *          *  

consensus_7169#0      CCTTGTTCGGCCGGCCCAGACGAAAGGGCAAG--CGT-GACGGGCCG---CGGCAACACG 754
consensus_7169#1      CCTTGTTCCGCCGGCCAAGACGNAAGGGCAAAGCCGTTGACGGGCCGGACCGACAACAAC 763
consensus_7169#2      -CCTGTTC-GCCGGCC-AGACGAA--GGCAAG--CGT-GACGG-CCG--CCGCCAACAC- 416
consensus_7169#3      -CCTGTTC-GCCGGCC-AGACGAA--GGCAAG--CGT-GACGG-CCG--CCGCCAACAC- 365
consensus_7169#4      -CCTGAAC-ACCATCGGTTNCNGACTGTCGGG---GAGCACCGACCG--CAGCCAACGGG 443
                       * **  *  **  *     *  *  * *      *   ** * ***    * ****   

consensus_7169#0      --GGGCATTCAGG---AACCTTGACCAAGGCTTGGTGTN-GANGGCTTTCCAAGTTCGAA 808
consensus_7169#1      --GGGCAATCAAGGCAAACCTGAACCAGGCCCTGGTGTTCGAACGGCTTCCA--TTTCAA 819
consensus_7169#2      ---GGCCATCAGC---AACCT-GACCAG--CCTGGTGTCGACGCTCCAGTCGAGCCTGGC 467
consensus_7169#3      ---GGCCATCAGC---AACCT-GACCAG--CCTGGTGTCGACGCTCCAGTCGAGCCTGGC 416
consensus_7169#4      TCAGATCGTCACC---AACGC--GCTGA---ACAACGTGGGCACCGCCGTCAA-TTCGGG 494
                         *    ***     ***     *           **            *         

consensus_7169#0      AACCTTTNNC--GGTC-CNTTGAACCACGGGTTTTAAACCACCCTTTAAAATTTTCCCCG 865
consensus_7169#1      CCCTTGTGCC--CGTC-CCTTAAAC-ACG----TTAA-----TCGCTAAANTTACCCGTG 866
consensus_7169#2      CGTCCTGAACACGGTGACGCT-AATGCCGTCGCCTCGGCGAACGCCTCCATCTCGGGCAA 526
consensus_7169#3      CGTCCTGAACACGGTGACGCTGAATGCCGTCGCCTCGGCGAACGCCTCCATCTCGGGCAA 476
consensus_7169#4      CGTCAGTGCCG------------------------------------------------- 505
                               *                                                  

consensus_7169#0      TTCGACCACCTTCTNGNGGAAAAAAGCGCCTTTCACATTCATTTC---CGCGGGCC--AA 920
consensus_7169#1      ATCCACC--CTTTCATGGAAAAAACAGGCCTTTC----CCATCTT---CGGGGGCA--AA 915
consensus_7169#2      CGCGTCCGCCGTGATCGGACCGATCGTGGCCAACCTGGCCAGCACGAACGCGACCATTGT 586
consensus_7169#3      CGCGTCCGCCGTGATCGGACCGATCGTGGCCAACCTGGCCAGCACGAACGCGACCATTGT 536
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      AAACCNGTCCCCGCCC--CGTTTAATCTCTCNAACACCCAAAN-TATNTGGCCCAACCAC 977
consensus_7169#1      CACCCAGTTTCNCGCC--CTTGTAAT---TCGGA-ACCCCNAT-CTTTTGGCCCAACCNC 968
consensus_7169#2      GAACTGCTCCCGGACCTACCTGCCGCTGGCCGTGCGCACGGACGTGTTCTACACGACCGC 646
consensus_7169#3      GAACTGCTCCCGGACCTACCTGCCGCTGGCCGTGCGCACGGACGTGTTCTACACGACCGC 596
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      CTTGNGGCACCACAACATAACACCGCAAACACACATTTTTTGAAACCTTCGTCCCCCGNG 1037
consensus_7169#1      -TTGATCCACNC--ACGAAACACC-----NACACATTTTTTACANTCT--GATNCCCCCA 1018
consensus_7169#2      CCTCGGTGGGCTGCGTAGTGGACG-CGACCCAACGTGGTGAACATCCT--GGTCGGGCAA 703
consensus_7169#3      CCTCGGTGG-CTGCGTAGTGGACG-CGACC-AACGTGGTGAACATCCT--GGTCGG-CAA 650
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      GAACANTNCCNCTTCGNCCACTTANACATCGANCCCA----------------------- 1074
consensus_7169#1      GAACATTA--ANCTATCCCATT-------------------------------------- 1038
consensus_7169#2      CACGATCGCGGGTCCGTCAACCTTCGGGCCGGTCACCCGTGTCCGCGAACTTCGACCGGG 763
consensus_7169#3      CACGATCGCGG--TCGTCAAC--TCGGNC--GTCACCCGTGTCCGC--ACCTCGACGG-- 700
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      ------------------------------------------------------------
consensus_7169#1      ------------------------------------------------------------
consensus_7169#2      CCCAAAGACGATTCAAGCCTTTTGCCCATTTGCNGTCACACTCACTTCCCGNTCCAAAGC 823
consensus_7169#3      -CCAGCGTCAGCGTGTGCATTGCGTCGCTCTTCCCGTCCACGCTCTGCCAGACCGCGA-- 757
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      ------------------------------------------------------------
consensus_7169#1      ------------------------------------------------------------
consensus_7169#2      TTCTCTTTNCCAAACCCCGGGAACACGTGCTCCAAAACCACCCGGGGCCTTACATTTACC 883
consensus_7169#3      ----CCGTGCCGAACGC-----AC-CNGGCTACATTACGAACGTGGCGCTCGATGTGGCC 807
consensus_7169#4      ------------------------------------------------------------
                                                                                  

consensus_7169#0      -----------------------------------------------------
consensus_7169#1      -----------------------------------------------------
consensus_7169#2      AAACCCGCTTTGCGCCCTCAAATNTTTGCCCACAAANTTTNTCAACACACCGG 936
consensus_7169#3      ACATCAAGACGGG---------------------------------------- 820
consensus_7169#4      -----------------------------------------------------
                                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)