These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7179#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1665 fasta sequence [CCGCGAAAAACGCCAGATGGAGGAGGACACGCGTAAGCACGAAGCACCTCCGCCATCGAACCATTCGTACCACAACCAGCGAGACCGGCGCGAGAATCAGGGCGGTGGAAACTACTATGACGGCCCTGGCAAGTATCACGGTGGTGGTGGTGGCGGCGGCGGCTATAACAACAAATACAATGACCGTGGTGGAGATGACGGCTATGATGGTGGATACGGCAGTCGAGGTGGTGGTGGTGGCTATCATGGAGGATACAACAAAGGCGGAAGCAGCGGTGGTTACGGAGGTTATAACAATCGTAACAGCTACAACAATCGTGACGATCCGGGACGTGGTTATCCGAGCTTTGACCGGCGTAATAATAATGGCAACAGTGGCGGAAGCAACAACAATGGCGATGATCAACATGATGCTGCCGCACCAGGCGGAGGTGGTGGAGGTGGATATAATTCGCGCGGTGGTTATAACAATCGCTCACGAGATTATTATCGCGATGAGCGCCGAGGACCGAATGACTACGGTCGAGCTCGAGGCAGCGACTTCGATAACGGGCGAGACAGTGATGGTGGAGGTATCTACCGAAGCGGAGACCGTGGAGACCGCGGCGATCGCGGAGATCGTGGTGAACGTGGTGAACGTGGTGATCGCGGAGATCGCGGAGATCGTGGAGATCGCGGAGATCGCGGCGATCGCGGCGATCGC-GGTGATCGTGACCGAGGCTCTTCTCGAGACCACTTCCGGGATCGGAACGATCGGATGATGGGTCCTGGCAACAATCGTGGAGGATCTGGTAGTAACGGCAGCGGCTCTAACATCTTCAGAAATCCAAATTAGGCAACTGACGAATAACTGATTAAACTATCCGAATACACGAAGGACTTATCACTACTGCCATGGTGGTAGGAGAAAAACTCAACTGCAGGCTGAAGATGCGGAACGCATCCTTCAGACAGACCGATGGTTCCTTTTCTTATTAATCTGATGGTTCATGAATGGAGGATATCGGTACAGATACAGATGATAACCCATATTAAAACGAAGATAAATGTGAGTATGAAGGGTAACAGAAGCTAACAGGTAACAGAAACACAACCGCGACTTGGCTATGCTCGGAATATTTATCCAAAAGTGCTTAAGAGATGCCAACGTATTTCGTTGATGTACTAGAATGATACGACTTTGAGGCAGATGTAACAATAGCGTAGAAAAATAACAAGGATAGCAGGAGATACAATTGGATAATCTGCATGGCATTATCTCTTG-TGCATCTTAAA-TTACGCTAG-CCATGTACTACTCAAAATCCCGCG-CCC-TCAAATCCACAAG-ACTGTCTACTCTTCATTCTCCCCTTACCCCAACATAAAAAACTAGGTACATTGCAGTCTAAACAAGATAAAAGTACAGTACTATAGTGCAAAGGAAAGTAAATTGTTATCAATGTTGTCTTAAACCGCCTGATTAAGTATCCACAAACAAACAGCACTTGAAGAAAACGTGTACAGACGAAGGGAGCGGATGTAGTTCAAAAAGTTCTTACAAACAATATGTTTTATCGATGAAGTATGTTTTTAAACTGTAGGAAATTGTAACGTATAACAAACTAAACTCAATTAAACGGAAAGAGAACACATAAACAAAACAGAAGAAAAGAAAGAAAACAAACAAGA] [+] EMBL BM630496 [CCGCGAAAAACGCCAGATGGAGGAGGACACGCGTAAGCACGAAGCACCTCCGCCATCGAACCATTCGTACCACAACCAGCGAGACCGGCGCGAGAATCAGGGCGGTGGAAACTACTATGACGGCCCTGGCAAGTATCACGGTGGTGGTGGTGGCGGCGGCGGCTATAACAACAAATACAATGACCGTGGTGGAGATGACGGCTATGATGGTGGATACGGCAGTCGAGGTGGTGGTGGTGGCTATCATGGAGGATACAACAAAGGCGGAAGCAGCGGTGGTTACGGAGGTTATAACAATCGTAACAGCTACAACAATCGTGACGATCCGGGACGTGGTTATCCGAGCTTTGACCGGCGTAATAATAATGGCAACAGTGGCGGAAGCAACAACAATGGCGATGATCAACATGATGCTGCCGCACCAGGCGGAGGTGGTGGAGGTGGATATAATTCGCGCGGTGGTTATAACAATCGCTCACGAGATTATTATCGCGATGAGCGCCGAGGACCGAATGACTACGGTCGAGCTCGAGGCAGCGACTTCGATAACGGGCGAGACAGTGATGGTGGAGGTATCTACCGAAGCGGAGACCGTGGAGACCGCGGCGATCGCGGAGATCGTGGTGAACGTGGTGATCGCGGAGATCGCGGAGATCGCGGAGATCGTGGAGATCG ] [+] EMBL BM624149 [ ccgATCGAACCATTCGTACCACAACCAGCGAGACCGGCGCGAGAATCAGGGCGGTGGAAACTACTATGACGGCCCTGGCAAGTATCACGGTGGGGGTGGTGGCGGCGGCGGCTATAACAACAAATACAATGACCGTGGTGGAGATGACGGCTATGATGGTGGATACGGCAGTCGAGGTGGTGGTGGTGGCTATCATGGAGGATACAACAAAGGCGGAAGCAGCGGTGGTTACGGAGGTTATAACAATCGTAACAGCTACAACAATCGTGACGATCCGGGACGTGGTTATCCGAGCTTTGACCGGCGTAATAATAATGGCAACAGTGGCGGAAGCAACAACAATGGCGATGATCAACCTGATGCTGCCGCACCAGGCGGAGGTGGTGGAGGTGGATATAATTCGCGCGGTGGTTATAACAATCGCTCACGAGATTATTATCGCGATGAGCGCCGAGGACCGAATGACTACGGTCGAGCTCGAGGCAGCGACTTCGATAACGGGCGAGACAGTGATGGTGGAGGTATCTACCGAAGCGGAGAC ] [+] EMBL BX625512 [ GGGCGAGACAGTGATGGTGGAGGTATCTACCGAAGCGGAGACCGTGGAGACCGCGGCGATCGCGGAGATCGTGGTGAACGTGGTGAACGTGGTGATCGCGGAGATCGCGGAGATCGTGGAGATCGCGGAGATCGCGGCGATCGCGGTGATCGC GGTGATCGTGACCGAGGCTCTTCTCGAGACCACTTCCGGGATCGGAACGATCGGATGATGGGTCCTGGCAACAATCGTGGAGGATCTGGTAGTAACGGCAGCGGCTCTAACATCTTCAGAAATCCAAATTAGGCAACTGACGAATAACTGATTAAACTATCCGAATACACGAAGGACTTATCACTACTGCCATGGTGGTAGGAGAAAAACTCAACTGCAGGCTGAAGATGCGGAACGCATCCTTCAGACAGACCGATGGTTCCTTTTCTTATTAATCTGATGGTTCATGAATGGAGGATATCGGTACAGATACAGATGATAACCCATATTAAAACCAAGATAAATGTGAGTATGAAGGGTAACAGAAGCTAACAGGTAACAGAAACACAACCGCGACTTGGCTATGCTCGGAATATTTATCCAAAAGTGCTTAAGAGATGCCAACGTATTTCGTTGATGTACTAGAATGATACGACTTTGAGGCAGATGTAACAATAGCGTAGAAAAATAACAAGGATAGCAGGAGATACAATTGGATAATCTGCATGGCATTATCTCTTG TGCATCTTAAA TTACGCTAGCCCATGTACTACTCAAAATCCCGCG CCC TCAAATCCACNAG ACTGTCTACTCTTCATTCTCCCCTT ] [+] EMBL CNS09PXE [ CCGTGGAGACCGCGGCGATCGC GAGAT CGTGGTGAACGTGGTGATCGCGGAGATCGCGGAGATCGTGGAGATCGTGGAGATCGCGGAGATCGCGGCGATCGC GGTGATCGTGACCGAGGCTCTTCTCGAGACCACTTCCGGGATCGGAACGATCGGATGATGGGTCCTGGCAACAATCGTGGAGGATCTGGTAGTAACGGCAGCGGCTCTAACATCTTCAGAAATCCAAATTAGGCAACTGACGAATAACTGATTAAACTATCCGAATACACGAAGGACTTACCACTACTGCCATGGTGGTAGGAGAAAAACTCAACTGCAGGCCGAAGATGCGGAACGCATCCTTCAGACAGACCGATGGTTCCTTTTCTTATTAATCTGATGGTTCATGAATGGAGGATATCGGTACAGATACAGAGGATAACCCATATTAAAACGAAGATAAATGTGAGTATGAAGGGTAACAGAAGCTAACAGGTAACAGAAACACAACCGCGACTTGGCTATGCTCGGAATATTTATCCAAAAGTGCTTAAGAGATGCCAACGTATTTCGTTGATGTACTAGAATGATACGACTTTGAGGCAGATGTAACAATAGCGTAGAAAAATAACAAGGATAGCAGGAGATACAATTGGATAATCTGCATGGCATT ] [+] EMBL BX466594 [ ggcagaATCGCACGAGGTNATGA CGAGGCTCTTCTCGAGACCACTTCCGGGATCGGAACGATCGGATGATGGGTCCTGGCAACAATCGTGGAGGATCTGGTAGTAACGGCAGCGGCTCTAACATCTTCAGAAATCCAAATTAGGCAACTGACGAATAACTGATTAAACTATCCGAATACACGAAGGACTTATCACTACTGCCATGGTGGTAGGAGAAAAACTCAACTGCAGGCTGAAGATGCGGAACGCATCCTTCAGACAGACCGATGGTTCCTTTTCTTATTAATCTGATGGTTCATGAATGGAGGATATCGGTACAGATACAGATGATAACCCATATTAAAACGAAGATAAATGTGAGTATGAAGGGTAACAGAAGCTAACAGGTAACAGAAACACAACCGCGACTTGGCTATGCTCGGAATATTTATCCAAAAGTGCTTAAGAGATGCCAACGTATTTCGTTGATGTACTAGAATGATACGACTTTGAGGCAGATGTAACAATAGCGTAGAAAAATAACAAGGATAGCAGGAGATACAATTGGATAATCTGCATGGCATTATCTCTTGTTGCATCTTAAATTTACGCTAG CCATGTACTACTCAAAATCCCGCGNCCCTTCAAATCCACAAGAACTGTCTACTCTTCATTCTCCCTTTACCCCAACATAAAAAACTAGGTACA ] [-] EMBL CNS09PXF [ ACAAAGATAACAGGAGATAAAATTGGAAAATCTGCATGGCATTATCTCTTG TGCATATTAAA TTATGCTAG CCATGTACTACTCAAAATCCCGCG CCC TCAAATCCACAAG ACTGTCTACTCTTCATTCT CCCTTACCCC ACAT AAAAACTAGGTACATTGCAGTCTAAACAAGATAAAAGTACAGTACTATAGTGCAAAGGAAAGTAAATTGTTATCAATGTTGTCTTAAACCGCCTGATTAAGTATCCACAAACAAACAGCACTTGAAGAAAACGTGTACAGACGAAGGGAGCGGATGTAGTTCAAAAAGTTCTTACAAACAATATGTTTTATCGATGAAGTATGTTTTTAAACTGTAGGAAATTGTAACGTATAACAAACTAAACTCAATTAAACGGAAAGAGAACACATAAACAAAACAGAAGAAAAGAAAGAAAACAAACAAGA] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||