These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7192#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1635 fasta sequence [TTAGAAAGCAATTGCAGAACAAAGTGTGTGCAAATCAGTGCGGGGCGATAAGAAGCATAGGAAGGTACGCAAAGAGAGAGAGAGAGAGCTATACTCAAATGCGGCAGGGAATGGAAATTAATTTGTCTTTCGATTCGCGTCCCCCAATACACCACTCCATTCTTTCATTGAGCAATTGTATTATTCTAGATTTTTCTTATAAGAAATGAACGTTCTATGACGAGAATTGGACTCTATGGCACTATTTTTGGACACTCATTGGAAATTCCTATTGGATTTGTTCAAAAAAGGTGCTATAGAGTCCAATTTCTTTGATGTACGTTTTCATTTCATGTACGAAAGAGTCATGAAAGTATCCCACAAGTTTGAGAACTCTTGAAAAACCCAGTATTCCAGATCAAAAATAAGCTGGTTCGTTTGGGATATTATGCTGCCCCGTCCTGGACAGATAGCTAGCGAAGAATGGGATAAAGAATGGGAGTGAGTGTGTTTCGCATCAGCGACCGTGTGTTTGTCTTGAATGTGATTGTTCTGTTTTGCGAGAGTGTGTGTGTTACGAACATTATGCATTATGCGTTTGTATATATCGATTTTTGCTGTGCATAATAATAGTAGAAAAGAGGCAAGGAGGGCAGTGTAAAACGCGATAATTGTATCAAACTAAGGAAAGGTTTTACTGCACGGTATCTTACTAAACAAATTCTCCACTGCTGATGCCGCGTGCTCCCTCTGAATGCTTCGTGTTTGGTAATGTTGTAGGGGAAGCCAAGTGTAAAAGACATCAAAACGCCTCTCACGTCCTAGCTTGTACGGTCATTCATAGCCAGCGCGCTGTTACGCTAACGGGAGAAAACGCGAGAAAATGATTGCTCCAGCGCGAGTAGCAAAACAAAAAAACGAGGAACTTATTAATAAGCTTTAGAGGAAAGGGGCAAAGGACGAGATAAGACATATGGAAACTGGAAAGAGTTAACGTAGGCAATACTTTGAACACTTTTAGGGAAACATATACAATAGTATAAAAAATATCAACCACACAACACCGCACTCCAGTCAACCCAGCCAACCAACCAACACAATATACATCTACTTATAGGAACCCGCTACTAAAACAAGTGCAAGTGAAATTAAGCATGAAACACTT--ATAAAAAACTATATTAATGTGTGGCTCAAGCAGGTGTGTGTAGTGTCGCGCGCGTTACAAGAATGTTTGGAAGCATTTGATTGTTGATCGTGTTGTAAAACGCCTCCCCCGAAACGCATTCGTATTCTTGTTAATGGACCCTAGATGATGATGATGGTGACCCGCCGGATGGTACTAGTTAAGGTGGTGTGTATGTGATGTATGTGTCCCCATAAATCAAGAAGAAGCTGTGTTTCTGTGTAGTGTGTAATTCATAAGTCGAACGCGGACACCCTCCCCCGATCAAGTGATCCTCCCCGTCACAACACAACTGACTCTGATACTCCCCCGTTCCTAGTGCGCTACTTTCTCTGGGCGGTTACTGTGCGTTCCAAGCGTGCAGAATTGCCATCCTTAAAGAG---AG--AGAGAAA-A-AGAGAGAAGAATGAAAATGGGGTAGGCAAAAAAGCGAATGAGATTGTTCCCTTGTGCGCGATGATGTGAGTGTGAGATCA] [+] EMBL BX613349 [TTAGAAAGCAATTGCAGAACAAAGTGTGTGCAAATCAGTGCGGGGCGATAAGAAGCATAGGAAGGTACGCAAAGAGAGAGAGAGAGAGCTATACTCAAATGCGGCAGGGAATGGAAATTAATTTGTCTTTCGATTCGCGTCCCCCAATACACCACTCCATTCTTTCATTGAGCAATTGTATTATTCTAGATTTTTCTTATAAGAAATGAACGTTCTATGACGAGAATTGGACTCTATGGCACTATTTTTGGACACTCATTGGAAATTCCTATTGGATTTGTTCAAAAAAGGTGCTATAGAGTCCAATTTCTTTGATGTACGTTTTCATTTCATGTACGAAAGAGTCATGAAAGTATCCCACAAGTTTGAGAACTCTTGAAAAACCCAGTATTCCAGATCAAAAATAAGCTGGTTCGTTTGGGATATTATGCTGCCCCGTCCTGGACAGATAGCTAGCGAAGAATGGGATAAAGAATGGGAGTGAGTGTGTTTCGCATCAGCGACCGTGTGTTTGTCTTGAATGTGATTGTTCTGTTTTGCGAGAGTGTGTGTGTTACGAACATTATGCATTATGCGTTTGTATATATCGATTTTTGCTGTGCATAATAATAGTAGAAAAGAGGCAAGGAGGGCAGTGTAAAACGCGATAATTGTATCAAACTAAGGAAAGGTTTTACTGCACGGTATCTTACTAAACAAATTCTCCACTGCTGATGCCGCGTGCTCCC ] [+] EMBL BX607983 [ TATCTTACTAAACAAATTCTCCACTGCTGATGCCGCGTGCTCCCTCTGAATGCTTCGTGTTTGGTAATGTTGTAGGGGAAGCCAAGTGTAAAAGACATCAAAACGCCTCTCACGTCCTAGCTTGTACGGTCATTCATAGCCAGCGCGCTGTTACGCTAACGGGAGAAAACGCGAGAAAATGATTGCTCCAGCGCGAGTAGCAAAACAAAAAAACGAGGAACTTATTAATAAGCTTTAGAGGAAAGGGGCAAAGGACGAGATAAGACATATGGAAACTGGAAAGAGTTAACGTAGGCAATACTTTGAACACTTTTAGGGAAACATATACAATAGTATAAAAAATATCAACCACACAACACCGCACTCCAGTCAACCCAGCCAACCAACCAACACAATATACATCTACTTATAGGAACCCGCTACTAAAACAAGTGCAAGTGAAATTAAGCATGAAACACTT ATAAAAAACTATATTAATGTGTGGCTCAAGCTGGTGTGTTTAGTGTCGCGCGCGTTACAAGAATGTTTGGAAGCATTTGATTGTTGATCGTGTTGTAAAACGCCTCCCCCGAAACGCATTCGTATTCTTGTTAATGGACCCTAGATGATGATGATGGTGACCCGCCGGATGGTACTAGTTAAGGTGGTGTGTATGTGATGTATGT ] [+] EMBL BX612692 [ AAATTCTCCACTGCTGATGCCGCGTGCTCCCTCTGAATGCTTCGTGTTTGGTAATGTTGTATGGGAAGCCAAGTGTAAAAGACATCAAAACGCCTCTCACGTCATAGCTTGTACGGCAATTCATAGCCAGCGCGCTGTTACGCTAACGGGAAAAAACGCGAGAAAAGGATTGCTCCAACGTGAGTAGCAAAACAAAAAAACGAGGAACTTATTCATAAGCTTTAGAGGAAAGGGACAAAGGAAGAGATAAGACGTATGGAAACTGGAAAGAGTTAACGTAGGAAATACTATGAACACTTTTAGGGAAACATATACAATAGTGT AACAATATCAACCACACAACACCGCACTCCAGTCAACCCAGCCAACCAACCAACACAATATACATCTACTTATAGGAACCCGCTACTAAAACAAGTGCAAGTGAAATTAAGCATGAAACACTTACAAAAAAAACTATATTAATGTGTGGCTCAAGCAGGTGTGTGTAGTGTCGCGCGCGTTACAAGAATGTTTGGCAGCATTTGATTGTTGATCGTGTTGTAAAACGCCTCCCCCGAAACGCATTCGTATTCTTGTTAATGGACCCTAGATGATGATGATGGTGACCCGCCGGATGGTACTAGTTA ] [+] EMBL BM575924 [ ccgGGAAAGGGGCAAAGGACGAGATAAGACATATGGAAACTGGAAAGAGTTAACGTAGGCAATACTTTGAACACTTTTAGGGAAACATATACAATAGTATAAAAAATATCAACCACACAACACCGCACTCCAGTCAACCCAGCCAACCAACCAACACAATATACATCTACTTATAGGAACCCGCTACTAAAACAAGTGCAAGTGAAATTAAGCATGAAACACTT ATAAAAAACTATATTAATGTGTGGCTCAAGCAGGTGTGTGTAGTGTCGCGCGCGTTACAAGAATGTTTGGAAGCATTTGATTGTTGATCGTGTTGTAAAACGCCTCCCCCGAAACGCATTCGTATTCTTGTTAATGGACCCTAGATGATGATGATGGTGACCCGCCGGATGGTACTAGTTAAGGTGGTGTGTATGTGATGTATGTGTCCCCATAAATCAAGAAGAAGCTGTGTTTCTGTGTAGTGTGTAATTAACATGTCGAACGCGGACACCCTCCCCCGATCAAGTGATCTTCCCCGTCACAACACAACTGACTCTGATACTCCCCCGTTCCTAGTGCGCTACTTTCTCTGGGCGGTTACTGTGCGTTCCAAGCGTGCAGAATTGCCATCCTTAAAGAG AG AGAGAAA A AGAGAGAAGAATGAA ] [+] EMBL BM653839 [ ccgACTATGAACACTTTTAGGGAAACATGTACAATAGTATAAAAAATATCAACCACACAACACCGCACTCCAGTCAACCCAGCCAACCAACCAACACAATATACATCTACTTATAGGAACCCGCTACTAAAACAAGTGCATGTGAAATTAAGCATGAAACACTT ACAAAAAACTATATTAATATGTGGCTCAAGCAGGTGTGTGTAGTGTCGCGCGCGTTACAAGAATGTTTGGAAGCATTTGATTGTTGATCGTGTTGTAAAACGCCCCCCCCGAAACGCATTCGTATTCTTGTTAATGGACCCTAGATGATGATGATGGTGACCCGCCGGATGGTACTAGTTAAGGTGGTGTATATGTGATGTATGTGTCCCCATAAATCAAGAAGAAGCTGTGTTTCTGTGTAGTGTGTAATTCATAAGTCGAACGCGGACACCCTCCCCCGATCAAGTGATCCTCCCCGTCACAACACAACTGACTCTGATACTCCCCCGTTCCTAGTGCGCTACTTTTTCTGGGCGGCTACTGTGAGTTCCAAGCATGCAG ATTGCCATCCTTAACGAGCAAAGTAAGAGAAAGACAGAGAGAAGAATGAAAATGGGGTAGGCAAAAAAGCGAATGAGATTGTTCCCTTGTGCGCGATGATGTGAGTGTGAGATCA] [+] EMBL BM577662 [ ccGAACACTTTTAGGGAAACATGTACAATAGTATAAAAAATATCAACCACACAACACCGCACTCCAGTCAACCCAGCCAACCAACCAACACAATATACATCTACTTATAGGAACCCGCTACTAAAACAAGTGCATGTGAAATTAAGCATGAAACACTT ACAAAAAACTATATTAATATGTGGCTCAAGCAGGTGTGTGTAGTGTCGCGCGCGTTACAAGAATGTTTGGAAGCATTTGATTGTTGATCGTGTTGTAAAACGCCCCCCCCGAAACGCATTCGTATTCTTGTTAATGGACCCTAGATGATGATGATGGTGACCCGCCGGATGGTACTAGTTAAGGTGGTGTATATGTGATGTATGTGTCCCCATAAATCAAGAAGAAGCTGTGTTTCTGTGTAGTGTGTAATTCATAAGTCGAACGCGGACACCCTCCCCCGATCAAGTGATCCTCCCCGTC ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||