Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7200 cluster # 7200       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7200#0 length = 1308 sequences # 6  

consensusID : consensus_7200#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1308
fasta sequence
                              [GCAGAATCGCCACGAGGTCGCAAAACAGAGAAAAAACAAATCNGAGCTATAGAAACTATAATTACTTGTAGATCCTGCGAATGACGATTTAGGCAGAGACTTGCACAGATGAGGGCTAAAGTGAGATGGAGAGAGAGAGAGAAAGAGAGACAGAGTGAGTGAGAGACGAAAAGCAAGAGCATAAACAGGTAAGATAAACCTATACTAAAAACACAACAAAAAAAACAACC-GTCAAGTAGTAATGTGTAAAGAAGGGCGCTCTACTTTTCCAGCCTGCTAAGAAAAGAAAATAAGTGTA-GAATGATGTAACACAGGATATGCA-GGGCTGGCTTTTTCTAGGAAAAAGTGAAACACATACGCCTGGTATTTGCAAACCCGCCCCCCCCCCCCCTACCCACTCCTTGTTCCACTCGCAACGCACCCCACACTGAAGCGTCACACGCGCGGCGGAGCCTTCGCGTACATACGCACCCGCACAGGTCCCCTGTTCCCGGGAGAGACAAGCAAGTGCATTTCGCCACTGTGTTGTGTCTCTCCTCTCTGCGGCCGAATTGCTGTGGGTGGTACAGTTTGCCCCGTCGTCGTGCGCCCGTGTGTGGAGGTGGGTGATGCTGATAAAGGACGCTGCCAGACTGCCAGCGGCCGTTTGCTTCGGGGTTTTCCGTTGAAGAGTTTTGTTTTTCTTTTCTTCTAAATTTCTTCCCTCTGCGCGGGAAAAGAAAACAACACAGATCGCTGCAAAGAAAGCCACACAGTGCAAGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGTGCTCTAGGAAAACAAAAACAGACATATAGAATAACAGCAGGCAACTTTTCTATTTCTTTCTATATTTTCTTTCATTATGGCAGTGTAAAGTAAACCACAAAAGAAACGTGAAAACAAACTACATTACAAGTAAAACTGGGAACCGAGGCGGCCCCTTCCGCGGNGGACTGGTACCATTGTGAAGAAATGTAACAAACAAAAACAGAAACAAACGGAAAGTAACAAAAAAAAAACAAAAGCAACAAACAGAAACTTACAAACAAAAAAAAAAAGAACAAAACAAAAGTGACAAACAGAAGGTAACAGAAACTAAAGAGAAAGGCAAATACTAAATAGTTCTTACTTAATTTTCTTAACCCCTTTTTTTGTGTGCAGTATAATCGAGCCGAGGATCGCGAAAGAAGATTGATAGGGCAGAACAAACAAACGCAGAAACCCACAAACACACACACATACACACATAGAACCCAGGATACGA]

[+] EMBL BX467461             [GCAGAATCGCCACGAGGTCGCAAAACAGAGAAAAAACAAATCNGAGCTATAGAAACTATAATTACTTGTAGATCCTGCGAATGACGATTTAGGCAGAGACTTGCACAGATGAGGGCTAAAGTGAGATGGAGAGAGAGAGAGAAAGAGAGACAGAGTGAGTGAGAGACGAAAAGCAAGAGCATAAACAGGTAAGATAAACCTATACTAAAAACACAACAAAAAAAACAACCGGTCAAGTAGTAATGTGTAAAGAAGGGCGCTCTACTTTTCCAGCCTGCTAAGAAAAGAAAATAAGTGTACGAATGATGTAACACAGGATATGCAGGGGCTGGCTTTTTCTAGGAAAAAGTGAAACACATACGCCTGGTATTTGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX616486             [                                                                                                                                  GAGAGAGAGAGAAAGAGAGACAGAGTGAGTGAGAGACGAAAAGCAAGAGCATAAACA GTAAGATAAACCTATACTAAAAACACAACAAAAAAAACAACC GTCAAGTAGTAATGTGTAAAGAAGGGCGCTCTACTTTTCCAGCCTGCTAAGAAAAGAAAATAAGTGTA GAATGATGTAACACAGGATATGCA GGGCTGGCTTTTTCTAGGAAAAAGTGAAACACATACGCCTGGTATTTGCAAACCCGCCCCCCCCCCCCCTACCCACTCCTTTTTCCACTCGCAACGCACCCCACACTGAAGCGTCACACGCGCGGCGGAGCCTTCGCGTACATACGCACCCGCACAGGTCCCCTGTTCCCGGGAGAGACAAGCAAGTGCATTTCGCCACTGTGTTGTGTCTCTCCTCTCTGCGGCCGAATTGCTGTGGGTGGTACAGTTTGCCCCGTCGTCGTGCGCCCGTGTGTGGAGGTGGGTGATGCTGATAAAGGACGCTGCCAGACTGCCAGCGGCCGTTTGCTTCGGGGTTTTCCGTTGAAGAGTTTTGTTTTTCTTTTCTTCTAAATTTCTTCCCTCTGCGCGGGAAAAGAAAACAACACAGATCGCTGCAAAGAAAGCCACACAGTGCATGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX627919             [                                                                                                                                                                                                                                  AACC GTCAAGTAGTAATGTGTAAAGAAGGGCGCTCTACTTTTCCAGCCTGCTAAGAAAAGAAAATAAGTGTA GAATGATGTAACACAGGATATGCA GGGCTGGCTTTTTCTAGGAAAAAGTGAAACACATACGCCTGGTATTTGCAAACCCGCCCCCCCCCCCCCTACCCACTCCTTGTTCCACTCGCAACGCACCCCACACTGAAGCGTCACACGCGCGGCGGAGCCTTCGCGTACATACGCACCCGCACAGGTCCCCTGTTCCCGGGAGAGACAAGCAAGTGCATTTCGCCACTGTGTTGTGTCTCTCCTCTCTGCGGCCGAATTGCTGTGGGTGGTACAGTTTGCCCCGTCGTCGTGCGCCCGTGTGTGGAGGTGGGTGATGCTGATAAAGGACGCTGCCAGACTGCCAGCGGCCGTTTGCTTCGGGGTTTTCCGTTGAAGAGTTTTGTTTTTCTTTTCTTCTAAATTTCTTCCCTCTGCGCGGGAAAAGAAAACAACACAGATCGCTGCAAAGAAAGCCACACAGTGCAAGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX623034             [                                                                                                                                                                                                                                                                                                                                             TTTTTCTAGGAAAAAGTGAAACACATACGCCTGGTATTTGCAAACCCGCCCCCCCCCCCCCTACCCACTCCTTGTTCCACTCGCAACGCACCCCACACTGAAGCGTCACACGCGCGGCGGAGCCTTCGCGTACATACGCACCCGCACAGGTCCCCTGTTCCCGGGAGAGACAAGCAAGTGCATTTCGCCACTGTGTTGTGTCTCTCCTCTCTGCGGCCGAATTGCTGTGGGTGGTACAGTTTGCCCCGTCGTCGTGCGCCCGTGTGTGGAGGTGGGTGATGCTGATAAAGGACGCTGCCAGACTGCCAGCGGCCGTTTGCTTCGGGGTTTTCCGTTGAAGAGTTTTGTTTTTCTTTTCTTCTAAATTTCTTCCCTCTGCGCGGGAAAAGAAAACAACACAGATCGCTGCAAAGAAAGCCACACAGTGCAAGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGTGCTCTAGGAAAACAAAAACAGACATATAGAATAACAGCAGGCAACTTTTCTATTTCTTTCTATATTTTCTTTCATTATGGCAGTGTAAAGTAAACCACAAAAGAAACGTGAAAACAAACTACATTACAAGTAAAACTGGGAACCGAGGCGGCCCCTTCCGCGGNGGACTGGTACCATT                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX614196             [                                                                                                                                                                                                                                                                                                                                                                     ATACGCCTGGTATTTGCAAACCCGCCCCCCCCCCCCCTACCCATTCCTTGTTCCACTCGCAACGCACCCCACACTGAAGCGTCACACGCGCGGCGGAGCCTTCGCGTACATACGCACCCGCACAGGTCCCCTGTTCCCGGGAGAGACAAGCAAGTGCATTTCGCCACTGTGTTGTGTCTCTCCTCTCTGCGGCCGAATTGCTGTGGGTGGTACAGTTTGCCCCGTCGTCGTGCGCCCGTGTGTGGAGGTGGGTGATGCTGATAAAGGACGCTGCCAGACTGCCAGCGGCCGTTTGCTTCGGGGTTTTCCGTTGAAGAGTTTTGTTTTTCTTTTCTTCCAAATTTCTTCCCTCTGCGCGGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM634060             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgTGCCAGACTGCCAGCGGCCGTTTGCTTCGGGGTTTTCCGTTGAAGAGTTTTGTTTTCCTTTTCTTCTAAATTTCTTCCCTCTGCGCGGGAAAAGAAAACAACTCAGATCGCTGCAAAGAAAGCCACACAGTGGAAGAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGTGCTCTAGGAAAACAAAAACAGACATATAGAATAACAGCAGGCAACTTTTCTATTTCTTTCTATATTTTCTTTCATTATGGCAGTGTAAAGTAAACCACAAAAGAAACGTGAAAACAAACTACATTACAAGTAAAACTGGGAACCGAGGCGGCCCCTTCCGCGGTGGCCTGGTACCATTGTGAAGAAATGTAACAAACAAAAACAGAAACAAACGGAAAGTAACAAAAAAAAAACAAAAGCAACAAACAGAAACTTACAAACAAAAAAAAAAAGAACAAAACAAAAGTGACAAACAGAAGGTAACAGAAACTAAAGAGAAAGGCAAATACTAAATAGTTCTTACTTAATTTTCTTAACCCCTTTTTTTGTGTGCAGTATAATCGAGCCGAGGATCGCGAAAGAAGATTGATAGGGCAGAACAAACAAACGCAGAAACCCACAAACACACACACATACACACATAGAACCCAGGATACGA]


>consensus_7200#0 GCAGAATCGCCACGAGGTCGCAAAACAGAGAAAAAACAAATCNGAGCTATAGAAACTATA ATTACTTGTAGATCCTGCGAATGACGATTTAGGCAGAGACTTGCACAGATGAGGGCTAAA GTGAGATGGAGAGAGAGAGAGAAAGAGAGACAGAGTGAGTGAGAGACGAAAAGCAAGAGC ATAAACAGGTAAGATAAACCTATACTAAAAACACAACAAAAAAAACAACCGTCAAGTAGT AATGTGTAAAGAAGGGCGCTCTACTTTTCCAGCCTGCTAAGAAAAGAAAATAAGTGTAGA ATGATGTAACACAGGATATGCAGGGCTGGCTTTTTCTAGGAAAAAGTGAAACACATACGC CTGGTATTTGCAAACCCGCCCCCCCCCCCCCTACCCACTCCTTGTTCCACTCGCAACGCA CCCCACACTGAAGCGTCACACGCGCGGCGGAGCCTTCGCGTACATACGCACCCGCACAGG TCCCCTGTTCCCGGGAGAGACAAGCAAGTGCATTTCGCCACTGTGTTGTGTCTCTCCTCT CTGCGGCCGAATTGCTGTGGGTGGTACAGTTTGCCCCGTCGTCGTGCGCCCGTGTGTGGA GGTGGGTGATGCTGATAAAGGACGCTGCCAGACTGCCAGCGGCCGTTTGCTTCGGGGTTT TCCGTTGAAGAGTTTTGTTTTTCTTTTCTTCTAAATTTCTTCCCTCTGCGCGGGAAAAGA AAACAACACAGATCGCTGCAAAGAAAGCCACACAGTGCAAGAGGCAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGTGCTCTAGGAA AACAAAAACAGACATATAGAATAACAGCAGGCAACTTTTCTATTTCTTTCTATATTTTCT TTCATTATGGCAGTGTAAAGTAAACCACAAAAGAAACGTGAAAACAAACTACATTACAAG TAAAACTGGGAACCGAGGCGGCCCCTTCCGCGGNGGACTGGTACCATTGTGAAGAAATGT AACAAACAAAAACAGAAACAAACGGAAAGTAACAAAAAAAAAACAAAAGCAACAAACAGA AACTTACAAACAAAAAAAAAAAGAACAAAACAAAAGTGACAAACAGAAGGTAACAGAAAC TAAAGAGAAAGGCAAATACTAAATAGTTCTTACTTAATTTTCTTAACCCCTTTTTTTGTG TGCAGTATAATCGAGCCGAGGATCGCGAAAGAAGATTGATAGGGCAGAACAAACAAACGC AGAAACCCACAAACACACACACATACACACATAGAACCCAGGATACGA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)