These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7208#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1056 fasta sequence [CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAACAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTGGACGAAACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAGCTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG] [+] EMBL BM653315 [CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAAT ] [+] EMBL BM595768 [ ccgGCGTGTGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGC ] [+] EMBL BM584468 [ ccgGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCAC ] [+] EMBL BX627725 [ GTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGTGCAGACGAGCTTACCCCCAAACACACCCACGTCACAACCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAACAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTGGACGAAACGAAGATCATAC ] [+] EMBL BX613634 [ CAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAAGGTCGGACCGGAACAGTGGCCGGTGGCGACGAGCGAGGCCGCGATACAG TTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGC GGACGCGC TCACCCGCATGCAGGAGGATCTGGACGAGACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAGCTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG] consensusID : consensus_7208#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence [CCGCCCACGCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA] [+] EMBL BM643853 [CCGCCCACGCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7208#0 CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGG 60 consensus_7208#1 ----------------------------------------------------CCGCCCAC 8 ** consensus_7208#0 AAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAAC 120 consensus_7208#1 GCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAAC 68 * ***************************************************** consensus_7208#0 AACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGT 180 consensus_7208#1 AACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGT 128 ************************************************************ consensus_7208#0 GCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTT 240 consensus_7208#1 GCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTT 188 ************************************************************ consensus_7208#0 TGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAA 300 consensus_7208#1 TGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAA 248 ************************************************************ consensus_7208#0 AACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACC 360 consensus_7208#1 AACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATC 308 *** ****************************************************** * consensus_7208#0 ATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTG 420 consensus_7208#1 ATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTG 368 ************************************************************ consensus_7208#0 CCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCC 480 consensus_7208#1 CCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCC 428 ************* ********************************************** consensus_7208#0 AAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTG 540 consensus_7208#1 AAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTG 488 ******************* **************************************** consensus_7208#0 TTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTC 600 consensus_7208#1 TTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTC 548 ************************************************************ consensus_7208#0 TCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTC 660 consensus_7208#1 TCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTC 608 ***************** ******************* ***** **************** consensus_7208#0 GAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTG 720 consensus_7208#1 GAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA------------- 655 *********************************************** consensus_7208#0 TACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGC 780 consensus_7208#1 ------------------------------------------------------------ consensus_7208#0 GTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAA 840 consensus_7208#1 ------------------------------------------------------------ consensus_7208#0 CAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCT 900 consensus_7208#1 ------------------------------------------------------------ consensus_7208#0 CAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTG 960 consensus_7208#1 ------------------------------------------------------------ consensus_7208#0 GACGAAACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAG 1020 consensus_7208#1 ------------------------------------------------------------ consensus_7208#0 CTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG 1056 consensus_7208#1 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||