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Anopheles gambiae
cluster # 7208 cluster # 7208       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7208#0 length = 1056 sequences # 5  
consensus_7208#1 length = 655 sequences # 1  

consensusID : consensus_7208#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1056
fasta sequence
                              [CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAACAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTGGACGAAACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAGCTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG]

[+] EMBL BM653315             [CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM595768             [          ccgGCGTGTGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGC                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM584468             [                                                           ccgGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCAC                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX627725             [                                                                                                                                                                                      GTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGTGCAGACGAGCTTACCCCCAAACACACCCACGTCACAACCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAACAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTGGACGAAACGAAGATCATAC                                                                             ]
[+] EMBL BX613634             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAAGGTCGGACCGGAACAGTGGCCGGTGGCGACGAGCGAGGCCGCGATACAG TTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGC GGACGCGC TCACCCGCATGCAGGAGGATCTGGACGAGACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAGCTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG]


>consensus_7208#0 CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGG AAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAAC AACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGT GCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTT TGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAA AACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACC ATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTG CCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCC AAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTG TTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTC TCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTC GAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTG TACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGC GTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAA CAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCT CAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTG GACGAAACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAG CTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG



consensusID : consensus_7208#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 655
fasta sequence
                              [CCGCCCACGCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA]

[+] EMBL BM643853             [CCGCCCACGCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA]


>consensus_7208#1 CCGCCCACGCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCA GAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCA TTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTG TGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGA AGAAGAAAAACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAA ACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAAC AGTGCCTGCCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGC TTACCCCCAAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCC TGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGC AGAGCTTCTCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGA CGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7208#0      CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGG 60
consensus_7208#1      ----------------------------------------------------CCGCCCAC 8
                                                                            **    

consensus_7208#0      AAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAAC 120
consensus_7208#1      GCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAAC 68
                        *    *****************************************************

consensus_7208#0      AACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGT 180
consensus_7208#1      AACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGT 128
                      ************************************************************

consensus_7208#0      GCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTT 240
consensus_7208#1      GCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTT 188
                      ************************************************************

consensus_7208#0      TGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAA 300
consensus_7208#1      TGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAA 248
                      ************************************************************

consensus_7208#0      AACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACC 360
consensus_7208#1      AACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATC 308
                      *** ****************************************************** *

consensus_7208#0      ATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTG 420
consensus_7208#1      ATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTG 368
                      ************************************************************

consensus_7208#0      CCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCC 480
consensus_7208#1      CCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCC 428
                      ************* **********************************************

consensus_7208#0      AAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTG 540
consensus_7208#1      AAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTG 488
                      ******************* ****************************************

consensus_7208#0      TTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTC 600
consensus_7208#1      TTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTC 548
                      ************************************************************

consensus_7208#0      TCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTC 660
consensus_7208#1      TCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTC 608
                      ***************** ******************* ***** ****************

consensus_7208#0      GAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTG 720
consensus_7208#1      GAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA------------- 655
                      ***********************************************             

consensus_7208#0      TACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGC 780
consensus_7208#1      ------------------------------------------------------------
                                                                                  

consensus_7208#0      GTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAA 840
consensus_7208#1      ------------------------------------------------------------
                                                                                  

consensus_7208#0      CAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCT 900
consensus_7208#1      ------------------------------------------------------------
                                                                                  

consensus_7208#0      CAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTG 960
consensus_7208#1      ------------------------------------------------------------
                                                                                  

consensus_7208#0      GACGAAACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAG 1020
consensus_7208#1      ------------------------------------------------------------
                                                                                  

consensus_7208#0      CTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG 1056
consensus_7208#1      ------------------------------------
                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)