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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7243#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 761 fasta sequence
[CCCAGGNTTNTCGAGGCACAATCTTACGCAAAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTTGTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCGATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTACGGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCCCCAGATACAGTACAAGAACCCGAAGGTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGCTGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAGATTCTACAACACCTGACCACCG-TAGTGGGAAAATCTGACGAAACGTTGAAGGCGGAAGCGAA-CTGG-CCGAAAAGCAGGACAATCCGGCCAACTTTGGTATCGGCTGCATGAAGCACTGCATTTGCGAAGTTCCCGGCCAGTTGCCGTGCCCGGGTGTTGTACCCGTCCCAAAGCACATGCGAGGCAAGTTTAAGTACCAAATGAAGGAATAATCTCGCGCACGAGAAGGTCGGACGCAAAAGAAGGATAAATAAA-TTTGTTTAGTTTTTTAGCTTCT------AAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCCGCCGCC]
[+] EMBL AL695956 [CCCAGGNTTNTCGAGGCACAATCTTACGCCNAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTTGTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCCATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTACGGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCCCCAGATACAGTACAAGAACCCGAAGGTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGCTGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAGATTCTACAACACCTGACCACCGCTACTGGGAAAATCTGACGAAA ]
[+] EMBL CNS0907O [ GAGGCACAATCTTACGCAAAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTTGTTGGCTATTGCTGTCTTTAACATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCGATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTACGGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCTCCAAATACAGTACAAGAACCCGAA GTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGCTGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAGATTCTACAACACCTGACCACCG TAGTGGGAAAATCTGACGAAACGTTGAAGGCGGAAGCGAA CTGGACCGAAAAGCAGGACAATCCGGCCAACTTTGGTATCGGCTGCATGAAGCACTGCATTTGCGAAGTTCCCGGCCAGTTGCCGTGCCCGGGTGTTGTACCCGTCCCAAAGCACATGCGAGGCAAGTTTAAGTACCAAATGAAGGAATAATCCCGCGCACGAGAAGGTCGGACGCAAAAGAAGGATAAATAAA TTTGTTTAGTTTTTTAGCTTCT AAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCCGCCGCC]
[-] EMBL CNS0907P [ AGGCACATTCTTACGCAAAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTTGTTGGCTATTGCTGTCTTTAACATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCGATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTAAAAAACGTACGGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCTCCAAATACAGTACAAGAACCCGAAGGTGCAAGTGGTAACGTTCAAAAACATGACCCCCTCTCCCTTTATTCGCTGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAGATTCTACAACACCTGACCACCG TAGTGGGAAAATCTGACGAAACGTTGAAGGCGGAAGCGAAGCTGG CCGAAAAGCAGGACAATCCGGCCAACTTTGGTATCGGCTGCATGAAGAACTGCATTTGCGAAGTTCCCGGCCAGTTGCCGTGCCCGGGTGTTGTACCCGTCCCAAAGAACATGCGAGGCAAGTTTAAGTACCAAATGAAGGAAT ]
[+] EMBL BM589200 [ ccGCACAATCTTACGCAAAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTTGTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCCATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTACGGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCCCCAGATACAGTACAAGAACCCGAAGGTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGCTGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAGATTCTACAACACCTGACCACCG TAGTGGGAAAATCTGACGAAACGTTGAAGGCGGAAGCGAAGCTGG CCGAAAAGCAGGACAATCCGGCCAACTTTGGTATCGGCTGCATGAAGCACTGCATTTGCGAAGTTCCCGGCCAGTTGCCGTGCCCGGGTGTTGTACCCGTGCCAAAGCACATGCGAGGCAAGTTTAAGTACCAAATGAAGGAATAATCTCGCGCACGAGAAGGTCGGACGCAAAAGAAGGATAAATAAA ]
[-] EMBL CNS08Q10 [ AAAAAACATGTATCTGTGTCTTGTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCGATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTACGGGGAGCAC ]
[+] EMBL CNS08Q0Z [ ACACATGTATCTGTGTCTTGTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCGATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTACGGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCCCCAGATACAGTACAAGAACCCGAA GTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGCTCCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAGATTCTACAACACCTGACCACCG TAGTGGGAAAATCTGACGAAACGTTGAAGGCGGAAGCGAA CTGG CCGAAAAGCAGGACAATCCGGCCAACTTTGGTATCGGCTGCATGAAGCACTGCATTTGCGAAGTTCCCGGCCAGTTGCCGTGCCCGGGTGTTGTACCCGTGCCAAAGCACATGCGAGGCAAGTTTAAGTACCAAATGAAGGAATAATCTCGCGCACGAGAAGGTCGGACGCAAAAGAAGGATAAATAAATTTTGTTTAGTTTTTTAGCTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGGCggg ]
consensusID : consensus_7243#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 668 fasta sequence
[CCGCGGACGCGTGGGGTGGCACATTGCCTATTTTTCCACAACAAATAGTCCCCCCTCGAGGCACAATCTTACGCAAAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTTGTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCCATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTACGGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCCCCAGATACAGTACAAGAACCCGAAGGTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGCTGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAGATTCTACAACACCTGCACCACCGTAGTGGGAAAATCTGACGAAACGTTGAAGGCGGACAGCGAAGCTGGCCGAAAAGCAGGACAATCCGGCCAACTTTTGGTATCGGCTGCATGAAGCACTGGCCATTTGCGAAGTTCCCGGGCCAGTGCCCCGGGGCCCCGGGTGGTTGTACCCGTGCCAAAGCACA]
[+] EMBL BM599698 [CCGCGGACGCGTGGGGTGGCACATTGCCTATTTTTCCACAACAAATAGTCCCCCCTCGAGGCACAATCTTACGCAAAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTTGTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCTGCCAAGATGCCCTTCATGAAAGGAAAGGCTCCCATTCGGAGAACCTTGCAGTACCTGAATGCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTACGGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCCCCAGATACAGTACAAGAACCCGAAGGTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGCTGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAGATTCTACAACACCTGCACCACCGTAGTGGGAAAATCTGACGAAACGTTGAAGGCGGACAGCGAAGCTGGCCGAAAAGCAGGACAATCCGGCCAACTTTTGGTATCGGCTGCATGAAGCACTGGCCATTTGCGAAGTTCCCGGGCCAGTGCCCCGGGGCCCCGGGTGGTTGTACCCGTGCCAAAGCACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7243#0 ---------------------------------------------CCCAGGNTTNTCGAG 15
consensus_7243#1 CCGCGGACGCGTGGGGTGGCACATTGCCTATTTTTCCACAACAAATAGTCCCCCCTCGAG 60
*****
consensus_7243#0 GCACAATCTTACGCAAAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTT 75
consensus_7243#1 GCACAATCTTACGCAAAGTCGGCAATTGCTGCTCAACAAAAACACATTTATCTGTGTCTT 120
************************************************************
consensus_7243#0 GTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCT 135
consensus_7243#1 GTTGGCTATTGCTGCCTTTAATATTTATTTAAACAGTGAAAGTGAACCTTCTACCTCGCT 180
************************************************************
consensus_7243#0 GCCAAGATGCCCTTCATGAAAGGAAAGGCTCCGATTCGGAGAACCTTGCAGTACCTGAAT 195
consensus_7243#1 GCCAAGATGCCCTTCATGAAAGGAAAGGCTCCCATTCGGAGAACCTTGCAGTACCTGAAT 240
******************************** ***************************
consensus_7243#0 GCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTAC 255
consensus_7243#1 GCCGGCCAGCTGATGCTGAAGGATAAGGTAAAAATATTCAGCGTGAATTACAACACGTAC 300
************************************************************
consensus_7243#0 GGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCCCCAGATACAGTAC 315
consensus_7243#1 GGAGAGCACCATGAAGGAGCCAGAGATTTCGTGTTTTGGAACATTCCCCAGATACAGTAC 360
************************************************************
consensus_7243#0 AAGAACCCGAAGGTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGC 375
consensus_7243#1 AAGAACCCGAAGGTGCAAGTGGTAACGTTCAAAAACATGACCCCGTCTCCCTTTATTCGC 420
************************************************************
consensus_7243#0 TGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAG 435
consensus_7243#1 TGCTATTTTGAAAACGGCAAACAGATGCTGATTGATATTGACAGTAAAAACCGGCAGGAG 480
************************************************************
consensus_7243#0 ATTCTACAACACCTG-ACCACCGTAGTGGGAAAATCTGACGAAACGTTGAAGGCGGA-AG 493
consensus_7243#1 ATTCTACAACACCTGCACCACCGTAGTGGGAAAATCTGACGAAACGTTGAAGGCGGACAG 540
*************** ***************************************** **
consensus_7243#0 CGAA-CTGGCCGAAAAGCAGGACAATCCGGCCAACTTT-GGTATCGGCTGCATGAAGCAC 551
consensus_7243#1 CGAAGCTGGCCGAAAAGCAGGACAATCCGGCCAACTTTTGGTATCGGCTGCATGAAGCAC 600
**** ********************************* *********************
consensus_7243#0 TG--CATTTGCGAAGTTCCCGGCCAGTTGCCGTG----CCCGGGTG-TTGTACCCGTCCC 604
consensus_7243#1 TGGCCATTTGCGAAGTTCCCGGGCCAGTGCCCCGGGGCCCCGGGTGGTTGTACCCGTGCC 660
** ****************** * **** * ******** ********** **
consensus_7243#0 AAAGCACATGCGAGGCAAGTTTAAGTACCAAATGAAGGAATAATCTCGCGCACGAGAAGG 664
consensus_7243#1 AAAGCACA---------------------------------------------------- 668
********
consensus_7243#0 TCGGACGCAAAAGAAGGATAAATAAATTTGTTTAGTTTTTTAGCTTCTAAAAAAAAAAAA 724
consensus_7243#1 ------------------------------------------------------------
consensus_7243#0 AAAAAAAAAAAAGGCCACATGTGCCCGGGCCGCCGCC 761
consensus_7243#1 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||