These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7262#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1225 fasta sequence [TATGAAGTTTATTTTCATTCCTTTCTGCTTTCTTATCTCAAAATGCAAAAAACGCAAAGGCAGTCTAGAAGGGTAGTTTTTATGAAGACGGTAGT-GGGACGGCATCAGTAAAGTGTATAAATAGATAAAACTGGACAGGCCTTCTGTTTTGTGCTCGGCTAAGAAGAAGTGTCCCTTACACGCATTACATCCC-GCCAGAAGTTTGTCCACAGGCAGGCGTTGTGACGATCGGAATAATACCAACGTACCCGAATTTTTCGCGAAAAACGCAAGAATATTGCGCCTGCGTGTGCAGCGTTGCAACTGCTTTGGCATGGCCCATTTGTATCCCAGCGGTAACCACCCACCCATATGCCAGCCCGCGCCGACGGTGTTATACAATAAAGGTAGTGCGACAGTGTGCGCTGCTGCTCCTTACTTCTGCTTCAGCTTGCGGGCATTCCGCACGTACGTCTGGATGTAGAAGTTGGTGAACAGGCTGATCAGGATGACCAGATTGACCGCGTGCAGGGTGTAGATGGTTTTGTTGGCGGCGCAGGACGGCTGCAGGGCGGCATAGACGTGCACCAGCATCGTGACCAGCTGGGCCAGCTGG-ATGATGGTGATGATCGGCTTGATGCGGCTGGTGAACGATTGGCAGGGCTTGAACGACGACAGGAAGTAGTACGAG-TACATGATCATGTGCACGATCGAGTTCAGCAC-CATGATGGACATCTCCTGGTAGGACAAGCTAAGCTTAAGGCTCCACCAGACGATAAGGAAGGTGCTGATGTGATGGTACACGTGCAGCGCGGAAACTTGGTTCTGCTTCTTGCGCAGCACGAAGAACACCGTCTCGATGAACTCGACCATTCGCAGGCACATCGCAAGCCAGCCATAGTAGACCGCATCCAGCCCGTGCTCGTACTCGGTGACGGGCAGCTTCGGTGTGCAGCGTCCGATAAAGCTAAACTGAAATCCTACCTTGATGTAATTACTAACAAGATAGC-CA-CAG-GC-GATCACCTGGAAGATGTTGTAGGCCGCAATGACCCAGCGCAGGTTGTACGGTTTCCTG-TACTCCATGTGCCTTGGTCCATATTTGTAGATGAAGTAAAGGTATATGGCAATCATGATGGAGCTCGGTACGGCGATGCCATCAAAGGGTAGGCATCGATGTGTTCCTCTCTGCCGCCCCGTGTTCGGCTGCGTGAGCCGTGTGCGTGTGAGGAGCTTTTTCAAATTCCGC] [+] EMBL CNS09HAF [TATGAAGTTTATTTTCATTCCTTTCTGCTTTCTTATCTCAAAATGCAAAAAACGCAAAGGCAGTCTAGAAGGGTAGTTTTTATGAAGACGGTAGTAGGGACGGCATCAGTAAAGTGTATAAATAGATAAAACTGGACAGGCCTTCTGTTTTGTGCTCGGCTAAAAAGAAGTGTCCCTTACACGCATTACATCCCTGCCAGAAGTTTGTCCACAGGCAGGCGTTGTGACGATCGGAATAATACCAACGTACCCGAATTTTTCGCGAAAAACGCAAGAATATTGCGCCTGCGTGTGCAGCGTTGCAACTGCTTTGGCATGGCCCATTTGTATCCCAGCGGTAACCACCCACCCATATGCCAGCCCGCGCCGACGGTGTTATACAATAAAGGTAGTGCGACAGTGTGCGCTGCTGCTCCTTACTTCTGCTTCAGCTTGCGGGCATTCCGCACGTACGTCTGGATGTAGAAGTTGGTGAACAGGCTGATCAGGATGACCAGATTGACCGCGTGCAGGGTGTAGATGGTTTTTTTGGCGGCGCAGGACGGCTGCAGGGCGGCATAGACGTGCACCAa ] [+] EMBL CNS0933A [ TTCATTCCTTTCTGCTTTCTTATCTCAAAATGCAAAAAACGCAAAGGCAGTTTAGAAGGGTAGTTTTTATGAAGACGGTAGT GGGACGGCATCAGTAAAGTGTATAAATAGATAAAACTGGACAGGCCTTCTGTTTTGTGCTCGGCTAAGAAGAAGTGTCCCTTACACGCATTACATCCC GCCAGAAGTTTGTCCACAGGCAGGCGTTGTGACGATCGGAATAATACCAACGTACCCGAATTTTTCGCGAAAAACGCAAGAATATTGCGCCTGCGTGTGCAGCGTTGCAACTGCTTTGGCATGGCCCATTTGTATCCCAGCGGTAACCACCCACCCATATGCCAGCCCGCGCCGACGGTGTTATACAATAAAGGTAGTGCGACAGTTTGCGCTGCTGCTCCTTACTTCTGCTTCAGCTTGCGGGCATTCCGCACGTACGTCTGGATGTAGAAGTTGGTGAACAGGCTGATCAGGATGACCAGATTGACCGCGTGCAGGGTGTAGATGGTTTTGTTGGCGGCGCAGGACGGCTGCAGGGCGGCATAGACGTGCACCAGCATCGTGACCAGCTGGGCCAGCTGG ATGATGGTGATGATCGGCTTGATGCGGCTGGTGAACGGTTGGCAGGGCTTGAACGACGACAGGAAGTAGTACGAGTTTCATGATCATGTGCACGATCGAGTTCAGCAC CATGATGGACATCTCCTGGTAGGACAAGCTAAGCTTAAGGCTCCACCAGACGATAAGGAAGGTGCTGATGTGATGGTACACGTGCAGCGCGGAAACTTGGTTCTGCTTCTTGCGCA CACGAAGAACACCGTCTCGATGAACTCGACCATTCGCAGGCACATCGCAAGCCAGCCATAGTAGACCGCATC ] [+] EMBL CNS093IT [ GACAGGCCTTCTGTTTTGTGCTCGGCTAAGAAGAAGTGTCCCTTACACGCATTACATTCC GCCAGAAGTTTTTCCACAGACAGGTGTTGTGACGATCGGAATCGGA AA GAATACGATACGATCGCGAAAAACGCAAGAATATTGCGCCTGCGTGTGCAGCGTTGCAACTGCTTTGGCATGGCCCATTTGTATCCCAGCGGTAACCACCCACCCATATGCCAGCCCGCGCCGACGGTGTTATAAAATAAAGGTAGTGCGACA GTGCGCTGCTGCTCCTTACTTCTGCTTCAGCTTGCGGGCATTTCGCACGTACGTCTGGATGTAAAAGTTGGTGAACAGGCTGATCAGGATGACCAGATTGACCGCGTGCAGGGTGTAGATGGTTTTGTTGGCGGCGCAGGACGGCTGCAGGGCGGCATAGACGTGCACCAGCATCGTGACCAGCTGGGCCAGCTGGAATGATGGTGATGATCGGCTTGATGCGGCTGGTGAACGATTGGCAGGGCTTGAACGACGACAGGAAGTAGTACGAG TACA ] [-] EMBL BX624742 [ CTGGATGTAAAAGTTGGTGAACAGGCTGATCAGGATGACCAGATTGACCGCGTGCAGGGTGTAGATGGTTTTGTTGGCGGCGCAGGACGGCTGCAGGGCGGCATAGACGTGCACCAGCATCGTGACCAGCTGGGCCAGCTGG ATGATGGTGATGATCGGCTTGATGCGGCTGGTGAACGATTGGCAGGGCTTGAACGACGACAGGAAGTAGTACGAG TACATGATCATGTGCACGATCGAGTTCAGCAC CATGATGGACATCTCCTGGTAGGACAAGCTAAGCTTAAGGCTCCACCAGACGATAAGGAAGGTGCTGATGTGATGGTACACGTGCAGCGCGGAAACTTGGTTCTGCTTCTTGCGCAGCACGAAGAACACCGTCTCGATGAACTCGACCATTCGCAGGCACATCGCAAGCCAGCCATAGTAGACCGCATCCAGCCCGTGCTCGTACTCGGTGACGGGCAGCTTCGGTGTGCAGCGTCCGATAAAGCTAAACTGAAATCCTACCTTGATGTAATTACTAACAAGATAGC CA CAG GC GATCACCTGGAAGATGTTGTAGGCCGCAATGAC ] [-] EMBL BX624311 [ CGGCTGCAGGGNNGCATAGACGTGCACCAGCATCGTGACCAGCTGGGCCAGCTGG ATGATGGTGATGATCGGCTNGATGCGGCTGGTGAACGATTGGCAGGGCTTGAACGACGACAGGAAGTAGTACGAG TACATGATCATGTGCACGATCGAGTTCAGCAC CATGATGGACATCTCCTGGTAGGACAAGCTAAGCTTAAGGCTCCACCAGACGATAAGGAAGGTGCTGATGTGATGGTACACGTGCAGCGCGGAAACTTGGTTCTGCTTCTTGCGCAGCACGAAGAACACCGTCTCGATGAACTCGACCATTCGCAGGCACATCGCAAGCCAGCCATAGTAGACCGCATCCAGCCCGTGCTCGTACTCGGTGACGGGCAGCTTCGGTGTGCAGCGTCCGATAAAGCTAAACTGAAATCCTACCTTGATGTAATTACTAACAAGATTGCTCATCAGTGCAGATCgac ] [-] EMBL CNS093IS [ ttG ATGATGGTGATGATCGGCTTGATGCGGCTGGTGAACGATTGGCAGGGCTTGAACGACGACAGGAAGTAGTACGAG TACATGATCATGTGCACGATCGAGTTCAGCAC CATGATGGACATCTCCTGGTAGGACAAGCTAAGCTTAAGGCTCCACCAGACGATAAGGAAGGTGCTGATGTGATGGTACACGTGCAGCGCGGAAACTTGGTTCTGCTTCTTGCGCAGCACGAAGAACACCGTCTCGATGAACTCGACCATTCGCAGGCACATCGCAAGCCAGCCATAGTAGACCGCATCCAGCCCGTGCTCGTACTCGGTGACGGGCAGCTTCGGTGTGCAGCGTCCGATAAAGCTAAACTGAAATCCTACCTTGATGTAATTACTAACAAGATAGC CA CAG GC GATCACCTGGAAGATGTTGTAGGCCGCAATGACCCAGCGCAGGTTGTACGGTTTCCTG TACTCCATGTGCCTTGGTCCATATTTGTAGATGAAGTAAAGGTATATGGCAATCATGATGGAGCTCGGTACGGCGATGCCATCAAAGGGTAGGCATCGATGTGTTCCTCTCTGCCGCCCCGTGTTCGGCTGCGTGAGCCGTGTGCGTGTGAGGAGCTTTTTCAAATTCCGC] [-] EMBL CNS09HAE [ AG TACATGATCATGTGCACGATCGAGTTCAGCACACATGATGGACATCTCCTGGTAGGACAAGCTAAGCTTAAGGCTCCACCAGACGATAAGGAAGGTGCTGATGTGATGGTACACGTGCAGCGCGGAAACTTGGTTCTGCTTCTTGCGCAGCACGAAGAACACCGTCTCGATGAACTCGACCATTCGCAGGCACATCGCAAGCCAGCCATAGTAGACCGCATCCAGCCCGTGCTCGTACTCGGTGACGGGCAGCTTCGGTGTGCAGCGTCCGATAAAGCTAAACTGAAATCCTACCTTGATGTAATTACTAACAAGATAGC CA CAG GC GATCACCTGGAAGATGTTGTAGGCCGCAATGACCCAGCGCAGGTTGTACGGTTTCCTGATACTCCATGTGCCTTGGTCCATATTTGTAGATGAAGTAAAGGTATATGGCAATCATGATGGAGCTCGG ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||