cluster # 7266

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Anopheles gambiae
cluster # 7266 cluster # 7266 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7266#0 length = 1193 sequences # 6

consensus_7266#1 length = 304 sequences # 1

consensusID : consensus_7266#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1193
fasta sequence

                              [CAGATCGTGCAACTGTATGCAGATTGCACTGCTCTATCAACCGGTTGATCAGATTGTTACTGTCCCCCTCGACACTGGCCTCTTCCGACGCTGCGCCACCCTCCGACGATGGTGCCGCACCTTGGAAGAAGTTGCAGAAATCCTGCGGAAAGCCGTACACATTCCGCTTGATCGGCTGTACGCCACAGTCGTTGGGCAGATAGCGGAATTCGGGATCATCCTCCTCTTCGATCGTCGCCACCTGCGCTTCATCGTCCAGCTGGTACAGTAATCGAACGCCAAGCTGTCGGAATGGCCCTTGCCGTACAGTGAAAAGTCCATAATGATGACATTATCCTTCGCTGCCCCCTACACGTCGAATACATAATCCTTCAACGGGAAGGTCTCCTTTATCTTCTCCTTGAACAGCGACACAATATCGTTCACGATGTCGCTCCGTTCGCGTGCAATGTGCTCGTGATACGATGGCCAGTGCCGGGGGGAGATCGCCACGAGCGACCGATTGCGCACGAAGCAACGGAACTCCGACCCGGGATGGATGTCCCGCCACTTCTTCAGCACAACGTGATACCCGCTCCCATTCACCTCGGACCGTTCGCGGAAGTCTTCCTTACAGAAGCTGGACGCTTTCAGCAGCTGATACACGTCCGTAATGTCGCGCACACAGAGCGACTGGCCGAGCGTGATCCACTGCGCATCCTTCGGGCAGTGCCAGTCGCTTTTCAGAAATGCATTCCCTCCCAGACTCTGTATCGCATCGGTCAGCAATTGGGAGAATTCCGGAAATGCAGGCTGCTCCTGGTCGTCATCCGCACCATCCTCGCCCTCACTGTCCGTCCCATCGAACTGGTCGTCGAACGCGTTGTAGTGTGTGGTTTGAAATCCTTCCCCCGTGCTCACGTCCGTAAAGTTGGAGCACTCCTTCGGCAGAATTAGCATATCCTGGCGCAGATACGCCAGCACATCGTCCGGCACCGGAATGATGCACGATTTGATCGTATTTTTCCGAAACAGCTCGTACCAGTTCACATGCATGCAGGCCTGCTTTTCCAG-CTCGATGTTGCGGATCAACATTGTTTTAATTTTTGTTTCAATAAATTTTAAATTCACTCACACGCACACACACCGCAGCGTAATTTTCCAAAGTGATGAAATGCCGGCTGGAACTTGCAGCGACCAGAAAAAAGCAACGA]

[+] EMBL CNS08K4J             [CAGATCGTGCAACTGTATGCAGATTGCACTGCTCTATCAACCGGTTGATCAGATTGTTACTGTCCCCCTCGACACTGGCCTCTTCCGACGCTGCGCCACCCTCCGACGATGGTGCCGCACCTTGGAAGAAGTTGCAGAAATCCTGCGGAAAGCCGTACACATTCCGCTTGATCGGCTGTACGCCACAGTCGTTGGGCAGATAGCGGAATTCGGGATCATCCTCCTCTTCGATCGTCGCCACCTGCGCTTCATCGTCCAGCTGGTACAGTAATCGAACGCCAAGCTGTCGGAATGGCCCTTGCCGTACAGTGAAAAGTCCATAATGATGACATTATCCTTCGCTGCCCCCTACACGTCGAATACATAATCCTTCAACGGGAAGGTCTCCTTTATCTTCTCCTTGAACAGCGACACAATATCGTTCACGATGTCGCTCCGTTCGCGTGCAATGTGCTCGTGATACGATGGCCAGTGCCGGGGGGAGATCGCCACGAGCGACCGATTGCGCACGAAGCAACGGAACTCCGACCCGGGATGGATGTCCCGCCACTTCTTCAGCACAACGTGATACCCGCTCCCATTCACCTCGGACCGTTCGCGGAAGTCTTCCTTAAAGAAGCTGGACGCTTTCAGCAGCTGATACACGTCCGTAATGTCGCGCACACAGAGCGACTGGCCGAGCGTGATCCACTGCGCATCCTTCGGGCAGTGCCAGTCGCTTTTCAGAAATGCATTCCCTCCCAGACTCTGTATCGCATCGGTCAGCAATTGGGAGAATTCCGGAAATGCAGGCTGCTCCTGGTCGTCATCCGCA                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BX606985             [                                                                                                                                                                                                                                                                                                                                                                                                CTCCTTTATCTTCTCCTTGAACAGCGACACAATATCGTTCACGATGTCGCTCCGTTCGCGTGCAATGTGCTCGTGGTACGATGGCCAGTGCCGAGGGGAGATCGCCACGAGCGACCGATTGCGCACGAAGCAACGGAACTCCGACCCGGGATGGATGTCCCGCCACTTCTTCAGCACAACGTGATACCCGCTCCCATTCACCTCGGACCGTTCGCGGAAGTCTTCCTTACAGAAGCTGGACGCTTTCAGCAGCTGATACACGTCCGTAATGTCGCGCACACAGAGCGACTGGCCGAGCGTGATCCACTGCGCATCCTTCGGGCAGTGCCAGTCGCTTTTCAGAAACGCATTCCCTCCCAGACTCTGTATCGCATCGGTCAGCGATTGGGAGAATTCCGGAAATGCAGGCTGCTCCTGTTCGTCATCCGCACCATCCTCGCCCTCACTATCCGTTCCATCGAACTGGTCGTCGAACGCGTTGTAGTGTGTGGTTTGAAATCCTTCCCCCGTGCTCACGTCCGTAAAGTTGGAGCACTCCTTCGGCAGAATTAGCATATCCTGGCGCAGATACGCCAGCACATCTTCCGGCACCGGAATAATGCACGATTTGATCGTATTTTTTCGAAACAGCTCGTACCAGTTCACATGCATGCAGGCCTGCTTTTCCAG CTCGATGTTGCGGATCAACATTGTTTTAATTTTTGTTTCAATAAATTTTAAATTCACTCACACGCACACACACCG                                                                 ]
[-] EMBL BM634260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAGATCGCCACGAGCGACCGATTGCGCACGAAGCAACGGAACTCCGACCCAGGATGGATGTCCCGCCACTTCTTCAGCACAACGTGATACCCGCTCCCATTCACCTCGGACCGTTCGCGGAAGTCTTCCTTGCAGAAGCTGGACGCTTTCAGCAGCTGATACACGTCCGTAATGTCGCGCACACAGAGCGACTGGCCGAGCGTGATCCACTGCGCATCCTTCGGGCAGTGCCAGTCGCTTTTCAGAAATGCATTCCCTCCGAGACTCTGTATCGCATCGGTCAGCAATTGGGAGAATTCGGGAAATGCGGGCTGCTCCTGGTCGTCATCCGCACCTTCCTCGCCCTCACTGTCCGTCCCATCGAACTGGTCGTCGAACGCGTTGTAGTGTGTGGTTTGAAATCCTTCCCCCGTGCTCACGTCCGTAAAGTTGGAGCACTCCTTCGGCAGAATTAGCATATCCTGGCGCAGATACGCCAGCACATCGTCCGGCACCGGAATGATGCACGATTTGATCGTATTTTTCCGAAACAGCTCGTACCAGTTCACATGCATGCAGGCCTGCTTTTCCAG CTCGATGTTGCGGATCAACATTGTTTTAATTTTTGTTTCAATAAATTTTAAATGCACACAAGCACACACACACCGCAGCGTAATTTTCCAAAGTGATGAAATGCCGG                                 ]
[-] EMBL BM629473             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGCTGGACGCTTTCAGCAGCTGATACACGTCCGTAATGTCGCGCACACAGAGCGACTGGCCGAGCGTGATCCACTGCGCATCCTTCGGGCAGTGCCAGTCGCTTTTCAGAAATGCATTCCCTCCGAGACTCTGTATCGCATCGGTCAGCAATTGGGAGAATTCGGGAAATGCGGGCTGCTCCTGGTCGTCATCCGCACCTTCCTCGCCCTCACTGTCCGTCCCATCGAACTGGTCGTCGAACGCGTTGTAGTGTGTGGTTTGAAATCCTTCCCCCGTGCTCACGTCCGTAAAGTTGGAGCACTCCTTCGGCAGAATTAGCATATCCTGGCGCAGATACGCCAGCACATCGTCCGGCACCGGAATGATGCACGATTTGATCGTATTTTTCCGAAACAGCTCGTACCAGTTCACATGCATGCAGGCCTGCTTTTCCAG CTCGATGTTGCGGATCAACATTGTTTTAATTTTTGTTTCAATAAATTTTAAATGCACACAAGCACACACACACCGCAGCGTAATTTTCCAAAGTGATGAAATGCGTACTGGAACTTGCAGCGACCAGAAAAAAGCAACGA]
[-] EMBL AL933453             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACAGAGCGACTGGCCGAGCGTGATCCACTGCGCATCCTTCGGGCAGTGCCAGTCGCTTTTCAGAAATGCATTCCCTCCCAGACTCTGTATCGCATCGGTCAGCAATTGGGAGAATTCCGGAAATGCAGGCTGCTCCTGGTCGTCATCCGCACCATCCTCGCCCTCACTGTCCGTCCCATCGAACTGGTCGTCAAACGCGTTGTAGTGTGTGGTTTGAAATCCTTCCCCCGTGCTCACGTCCGTAAAGTTGGAGCACTCCTTCGGCAGAATTAGCATATCCTGGCGCAGATACGCCAGCACATCGTCCGGCACCGGAATGATGCACGATTTGATCGTATTTTTCCGAAACAGCTCGTACCAGTTCACGTGCATGCAGGCCTGCTTTTCCAG CTCGATGTTGCGGATCAACATTGTTTTAATTTTTGTTTCAATAAATTTTAAATTCACTCACACGCACACACACCGCAGCGTAATTTTNCAcctcg                                             ]
[-] EMBL CNS08K4I             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACGATTTGATCGTATTTTTTCGAAACAGCTCGTACCAGTTCACATGCATGCAGGCCTGCTTTTCCAGTCTCGATGTTGCGGATCAACATTGTTTTAATTTTTGTTTCAA                                                                                                   ]




>consensus_7266#0
CAGATCGTGCAACTGTATGCAGATTGCACTGCTCTATCAACCGGTTGATCAGATTGTTAC
TGTCCCCCTCGACACTGGCCTCTTCCGACGCTGCGCCACCCTCCGACGATGGTGCCGCAC
CTTGGAAGAAGTTGCAGAAATCCTGCGGAAAGCCGTACACATTCCGCTTGATCGGCTGTA
CGCCACAGTCGTTGGGCAGATAGCGGAATTCGGGATCATCCTCCTCTTCGATCGTCGCCA
CCTGCGCTTCATCGTCCAGCTGGTACAGTAATCGAACGCCAAGCTGTCGGAATGGCCCTT
GCCGTACAGTGAAAAGTCCATAATGATGACATTATCCTTCGCTGCCCCCTACACGTCGAA
TACATAATCCTTCAACGGGAAGGTCTCCTTTATCTTCTCCTTGAACAGCGACACAATATC
GTTCACGATGTCGCTCCGTTCGCGTGCAATGTGCTCGTGATACGATGGCCAGTGCCGGGG
GGAGATCGCCACGAGCGACCGATTGCGCACGAAGCAACGGAACTCCGACCCGGGATGGAT
GTCCCGCCACTTCTTCAGCACAACGTGATACCCGCTCCCATTCACCTCGGACCGTTCGCG
GAAGTCTTCCTTACAGAAGCTGGACGCTTTCAGCAGCTGATACACGTCCGTAATGTCGCG
CACACAGAGCGACTGGCCGAGCGTGATCCACTGCGCATCCTTCGGGCAGTGCCAGTCGCT
TTTCAGAAATGCATTCCCTCCCAGACTCTGTATCGCATCGGTCAGCAATTGGGAGAATTC
CGGAAATGCAGGCTGCTCCTGGTCGTCATCCGCACCATCCTCGCCCTCACTGTCCGTCCC
ATCGAACTGGTCGTCGAACGCGTTGTAGTGTGTGGTTTGAAATCCTTCCCCCGTGCTCAC
GTCCGTAAAGTTGGAGCACTCCTTCGGCAGAATTAGCATATCCTGGCGCAGATACGCCAG
CACATCGTCCGGCACCGGAATGATGCACGATTTGATCGTATTTTTCCGAAACAGCTCGTA
CCAGTTCACATGCATGCAGGCCTGCTTTTCCAGCTCGATGTTGCGGATCAACATTGTTTT
AATTTTTGTTTCAATAAATTTTAAATTCACTCACACGCACACACACCGCAGCGTAATTTT
CCAAAGTGATGAAATGCCGGCTGGAACTTGCAGCGACCAGAAAAAAGCAACGA

consensusID : consensus_7266#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 304
fasta sequence

                              [GGTGCCGCACCTTGGAAGAAGTTGCAGAAATCCTGCGGAAAGCCGTACACATTCCGCTTGATCGGCTGTACGCCACAGTCGTTCGGCAGATAGCGGAACTCGGGATCATCCTCCTCTTCGATCGTCGCCACCTGCGCTTCATCGTCCAGCTGGTCGTAATCGAACGCCAAGCTGTCGGAATGGCCCTTGCCGTACAGTGAAAAGTCCATAATGATGACATTATCCTTCGCTGGACGATACACGTCGAATACATAATCCTTCAACGGGAAGGTCTCCTCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM643167             [GGTGCCGCACCTTGGAAGAAGTTGCAGAAATCCTGCGGAAAGCCGTACACATTCCGCTTGATCGGCTGTACGCCACAGTCGTTCGGCAGATAGCGGAACTCGGGATCATCCTCCTCTTCGATCGTCGCCACCTGCGCTTCATCGTCCAGCTGGTCGTAATCGAACGCCAAGCTGTCGGAATGGCCCTTGCCGTACAGTGAAAAGTCCATAATGATGACATTATCCTTCGCTGGACGATACACGTCGAATACATAATCCTTCAACGGGAAGGTCTCCTCGGACGCGTGGGCGGACGCGTGGGCGG]




>consensus_7266#1
GGTGCCGCACCTTGGAAGAAGTTGCAGAAATCCTGCGGAAAGCCGTACACATTCCGCTTG
ATCGGCTGTACGCCACAGTCGTTCGGCAGATAGCGGAACTCGGGATCATCCTCCTCTTCG
ATCGTCGCCACCTGCGCTTCATCGTCCAGCTGGTCGTAATCGAACGCCAAGCTGTCGGAA
TGGCCCTTGCCGTACAGTGAAAAGTCCATAATGATGACATTATCCTTCGCTGGACGATAC
ACGTCGAATACATAATCCTTCAACGGGAAGGTCTCCTCGGACGCGTGGGCGGACGCGTGG
GCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7266#0      CAGATCGTGCAACTGTATGCAGATTGCACTGCTCTATCAACCGGTTGATCAGATTGTTAC 60
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      TGTCCCCCTCGACACTGGCCTCTTCCGACGCTGCGCCACCCTCCGACGATGGTGCCGCAC 120
consensus_7266#1      --------------------------------------------------GGTGCCGCAC 10
                                                                        **********

consensus_7266#0      CTTGGAAGAAGTTGCAGAAATCCTGCGGAAAGCCGTACACATTCCGCTTGATCGGCTGTA 180
consensus_7266#1      CTTGGAAGAAGTTGCAGAAATCCTGCGGAAAGCCGTACACATTCCGCTTGATCGGCTGTA 70
                      ************************************************************

consensus_7266#0      CGCCACAGTCGTTGGGCAGATAGCGGAATTCGGGATCATCCTCCTCTTCGATCGTCGCCA 240
consensus_7266#1      CGCCACAGTCGTTCGGCAGATAGCGGAACTCGGGATCATCCTCCTCTTCGATCGTCGCCA 130
                      ************* ************** *******************************

consensus_7266#0      CCTGCGCTTCATCGTCCAGCTGGTACAGTAATCGAACGCCAAGCTGTCGGAATGGCCCTT 300
consensus_7266#1      CCTGCGCTTCATCGTCCAGCTGGT--CGTAATCGAACGCCAAGCTGTCGGAATGGCCCTT 188
                      ************************   *********************************

consensus_7266#0      GCCGTACAGTGAAAAGTCCATAATGATGACATTATCCTTCGCTGCCCCCTACACGTCGAA 360
consensus_7266#1      GCCGTACAGTGAAAAGTCCATAATGATGACATTATCCTTCGCTGGACGATACACGTCGAA 248
                      ********************************************  *  ***********

consensus_7266#0      TACATAATCCTTCAACGGGAAGGTCTCCTTTATCTTCTCCTTGAACAGCGACACAATATC 420
consensus_7266#1      TACATAATCCTTCAACGGGAAGGTCTCCTCGGACGCGTGGGCGGACGCGTGGGCGG---- 304
                      *****************************    *   *    * **       *      

consensus_7266#0      GTTCACGATGTCGCTCCGTTCGCGTGCAATGTGCTCGTGATACGATGGCCAGTGCCGGGG 480
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      GGAGATCGCCACGAGCGACCGATTGCGCACGAAGCAACGGAACTCCGACCCGGGATGGAT 540
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      GTCCCGCCACTTCTTCAGCACAACGTGATACCCGCTCCCATTCACCTCGGACCGTTCGCG 600
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      GAAGTCTTCCTTACAGAAGCTGGACGCTTTCAGCAGCTGATACACGTCCGTAATGTCGCG 660
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      CACACAGAGCGACTGGCCGAGCGTGATCCACTGCGCATCCTTCGGGCAGTGCCAGTCGCT 720
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      TTTCAGAAATGCATTCCCTCCCAGACTCTGTATCGCATCGGTCAGCAATTGGGAGAATTC 780
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      CGGAAATGCAGGCTGCTCCTGGTCGTCATCCGCACCATCCTCGCCCTCACTGTCCGTCCC 840
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      ATCGAACTGGTCGTCGAACGCGTTGTAGTGTGTGGTTTGAAATCCTTCCCCCGTGCTCAC 900
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      GTCCGTAAAGTTGGAGCACTCCTTCGGCAGAATTAGCATATCCTGGCGCAGATACGCCAG 960
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      CACATCGTCCGGCACCGGAATGATGCACGATTTGATCGTATTTTTCCGAAACAGCTCGTA 1020
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      CCAGTTCACATGCATGCAGGCCTGCTTTTCCAGCTCGATGTTGCGGATCAACATTGTTTT 1080
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      AATTTTTGTTTCAATAAATTTTAAATTCACTCACACGCACACACACCGCAGCGTAATTTT 1140
consensus_7266#1      ------------------------------------------------------------
                                                                                  

consensus_7266#0      CCAAAGTGATGAAATGCCGGCTGGAACTTGCAGCGACCAGAAAAAAGCAACGA 1193
consensus_7266#1      -----------------------------------------------------