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Anopheles gambiae
cluster # 7294 cluster # 7294       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7294#0 length = 1231 sequences # 6  
consensus_7294#1 length = 566 sequences # 1  

consensusID : consensus_7294#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1231
fasta sequence
                              [CCGGCGGCGATGAACGTCTTCCTCAACAGCCTGTCGCTGCAGGTGGTGGTGGCCCTGATCGTCGGCAGCCTGCTCTCGAGTACGTTTAAGTACCATGCGAAAATGTTTATCATCGTGCTGATGTCGTTTCTGGTACTGGTCGTCCCAATTCCGCTGTTCCTGTTCAAGCCCCGCTGGCCACTGAATGCGCTAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTTCGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTT-----GTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGG--AAAAAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGGCACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAGCGAAGAGACAATCTGTGATCAAATCCTGGTACTATACTGGTCATCATATTCGTGCTTCGCGGCGATATTATCAATGGGAAGGATAAAACAAAACAAAAGAGAGAGAGGGAGAAAGCGGAAGTGGATGCTTCGGGATGGAACACCAAAAAAAA]

[+] EMBL BM578961             [CCGGCGGCGATGAACGTCTTCCTCAACAGCCTGTCGCTGCAGGTGGTGGTGGCCCTGATCGTCGGCAGCCTGCTCTCGAGTACGTTTAAGTACCATGCGAAAATGTTTATCATCGTGCTGATGTCGTTTCTGGTACTGGTCGTCCCAATTCCGCTGTTCCTGTTCAAGCCCCGCTGGCCACTGAATGCGCTAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX611969             [                                                                                                                                                                                                                                                                   AGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTTCGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTT     GTTGTTGCGGG                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX612055             [                                                                                                                                                                                                                                                                   AGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTTCGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGCA                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM639057             [                                                                                                                                                                                                                                                                                                                                                                                     ccgAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCACAAGCGAAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGCCAGCAGCTGATGCAGACCGAGTTCGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGAGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTTGGTTGGTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGGAAAAAAAAAACACTCACCAAAAAC  AAAAAATCATTTGC                                                                                                                                                                                                                                            ]
[+] EMBL AGA285522            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGAAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTT     GTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGG  AAAAAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGGCACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAG                                                                                                                                                        ]
[-] EMBL AGA284221            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGCCTGGGCTGCAGTCGAGCAGAAGTGGGATGTATCGGGAAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGTT     GTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGG  AAAAAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGGCACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAGCGAAGAGACAATCTGTGATCAAATCCTGGTACTATACTGGTCATCATATTCGTGCTTCGCGGCGATATTATCAATGGGAAGGATAAAACAAAACAAAAGAGAGAGAGGGAGAAAGCGGAAGTGGATGCTTCGGGATGGAACACCAAAAAAAA]


>consensus_7294#0 CCGGCGGCGATGAACGTCTTCCTCAACAGCCTGTCGCTGCAGGTGGTGGTGGCCCTGATC GTCGGCAGCCTGCTCTCGAGTACGTTTAAGTACCATGCGAAAATGTTTATCATCGTGCTG ATGTCGTTTCTGGTACTGGTCGTCCCAATTCCGCTGTTCCTGTTCAAGCCCCGCTGGCCA CTGAATGCGCTAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAG TACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAAC CACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATC GTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTG GTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGG GAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGG CACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCG CAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAAG CGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATG ACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTTC GATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGTC GAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTGT TGTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGGAAA AAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGGC ACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAGC GAAGAGACAATCTGTGATCAAATCCTGGTACTATACTGGTCATCATATTCGTGCTTCGCG GCGATATTATCAATGGGAAGGATAAAACAAAACAAAAGAGAGAGAGGGAGAAAGCGGAAG TGGATGCTTCGGGATGGAACACCAAAAAAAA



consensusID : consensus_7294#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence
                              [CCGATCCTTGTTTTTTTTGCAGAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCACAAGCGAAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGAC]

[+] EMBL BM624304             [CCGATCCTTGTTTTTTTTGCAGAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCGGCACGACAACGACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTCGCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCACAAGCGAAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCATGACCAAGGCGGACGTGAC]


>consensus_7294#1 CCGATCCTTGTTTTTTTTGCAGAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGT TCGGCGTGGAGTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCG TGCTGCTGAACCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGT TCCGCAACATCGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTG CCTCCTACCTGGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACG TCATGAAACGGGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCG AGGGTACGCGGCACGACAACGACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCG GTCGATTCGCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCAC AAGCGAAAGCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACC AAGGGCATGACCAAGGCGGACGTGAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7294#0      CCGGCGGCGATGAACGTCTTCCTCAACAGCCTGTCGCTGCAGGTGGTGGTGGCCCTGATC 60
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      GTCGGCAGCCTGCTCTCGAGTACGTTTAAGTACCATGCGAAAATGTTTATCATCGTGCTG 120
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      ATGTCGTTTCTGGTACTGGTCGTCCCAATTCCGCTGTTCCTGTTCAAGCCCCGCTGGCCA 180
consensus_7294#1      --------------------------------------------------CCGATCCTTG 10
                                                                        *** *     

consensus_7294#0      CTGAATGCGCT-AATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGA 239
consensus_7294#1      TTTTTTTTGCAGAATTCCAGGCATTGTGGCCTGTGCATTTATTCGCCTGTTCGGCGTGGA 70
                       *   *  **  ************************************************

consensus_7294#0      GTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAA 299
consensus_7294#1      GTACGAAATCCGTGGCCAGGAGCACATTAACGTGCGGAACGGGGGCGTCGTGCTGCTGAA 130
                      ************************************************************

consensus_7294#0      CCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACAT 359
consensus_7294#1      CCACCAGAGTGCAATCGATATCGTGATGTTATCGCGATTGCTGCGCGAGTTCCGCAACAT 190
                      ************************************************************

consensus_7294#0      CGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCT 419
consensus_7294#1      CGTGCCGGTGGTGAAGAAGGAGCTGTTCTACATGCTCCCGTTCGGTATTGCCTCCTACCT 250
                      ************************************************************

consensus_7294#0      GGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACG 479
consensus_7294#1      GGTCGGGGTAGTGTTTATCGATCGCAAAAATACCGCCTCCGCGAAGGACGTCATGAAACG 310
                      ************************************************************

consensus_7294#0      GGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCG 539
consensus_7294#1      GGAAGCGGTCGCCATTACCAAAGACCATCTTAAACTGGCCATCTTCCCCGAGGGTACGCG 370
                      ************************************************************

consensus_7294#0      GCACGACAACGACACGCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTC 599
consensus_7294#1      GCACGACAACGAC--GCTGCTGCCGTTCAAGAAGGGCTCCTTCCACGTGGCGGTCGATTC 428
                      *************  *********************************************

consensus_7294#0      GCAATCGATCATACAGCCGGTGATAGTGTCCAAGTACCACTTTCTCGACCACAAGCGGAA 659
consensus_7294#1      GCAATCGATCATACAGCCGGTGATTGTGTCCAAGTACCACTTTCTCGACCACAAGCGAAA 488
                      ************************ ******************************** **

consensus_7294#0      GCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCAT 719
consensus_7294#1      GCGGTTCGGGCGGGGCCGGGTAATCATCAAGATTATGCCGGAAATCCCGACCAAGGGCAT 548
                      ************************************************************

consensus_7294#0      GACCAAGGCGGACGTGACCGAGCTGACCGAGCGCTGTCAGCAGCTGATGCAGACCGAGTT 779
consensus_7294#1      GACCAAGGCGGACGTGAC------------------------------------------ 566
                      ******************                                          

consensus_7294#0      CGATGCGCTCAGTGCGGAGGCGAAACAGTACTGCCATAACTGAGGGGCCTGGGCTGCAGT 839
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      CGAGCAGAAGTGGGATGTATCGGGCAATGCGAAAAGCAATAATAGTCGTACTTGTTGTTG 899
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      TTGTTGTTGCGGGGACCAGTGCTGCCGGTGCAGCTAGTAGTAGCGAGTAGCACACAGGAA 959
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      AAAAAACACTCACCAAAAACAAAAAAAATCATTTGCCTGAGTGAGCGAAAACAGCACGGG 1019
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      CACGGGAAAGCCGGCTTGGTGGAAGAAGAGAGAGAGGAAGCATTTTCGTGCGGTACTAAG 1079
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      CGAAGAGACAATCTGTGATCAAATCCTGGTACTATACTGGTCATCATATTCGTGCTTCGC 1139
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      GGCGATATTATCAATGGGAAGGATAAAACAAAACAAAAGAGAGAGAGGGAGAAAGCGGAA 1199
consensus_7294#1      ------------------------------------------------------------
                                                                                  

consensus_7294#0      GTGGATGCTTCGGGATGGAACACCAAAAAAAA 1231
consensus_7294#1      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)