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Anopheles gambiae
cluster # 7335 cluster # 7335       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7335#0 length = 1624 sequences # 4  
consensus_7335#1 length = 934 sequences # 1  
consensus_7335#2 length = 742 sequences # 1  
consensus_7335#3 length = 365 sequences # 1  

consensusID : consensus_7335#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1624
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGCGAGCACAGATACTTCTCCGGTTTCTTCCCGCGGGACCTTCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTGTTTTCATCCCTCGTCTAAAGAAACCTTCTCCTCCTCCACGTAAAACACGGATAACAGCATCCTTTCCTCCCGTGTGTGCTTTTGCTGTTTTGCGCATTTACACCGTATCTTCCGCGATCGAATCTCACGTTTCGTTTCTAATCGTGTGCAGCCGATCAAACACAACCACAGCCGCGTTTTCATAATCTTTCCGGTATTGCACAGCGTGAAGCTGGGTGGATATCTTAGCCTCATTATGGACAACAATATCGAAGGGGAGGAGGTGGAGTTCCGCAAACACGCCAAGTATTTTATACGATTTCTACACACACTGCCGGGTCGGTTGGCGTCGCACGATTCCACTCGAGTAACCATAGCCTTCTTTGCTGTCAGCGGGCTGGACGTGCTGGACTCGCTGCACATGCTGACCGACACCTTCCAGCAGGACATTTGCAACTGGATCTACAAGCTGCAGGTGGTGCCGAAACCGGGCGAACGGGGGTACGGTGGCATCCAGGGGTCCAGCACGTTCGATGTGATCGGTACGCCCGACTCCTGCGGGCTGCAGCTCTACCGGTGGGGCCATCTCGCCATCACGTACACGGGTATTGCTGTGCTGGTCGCGCTCGGGGACGATCTGTCGCGCCTCAATCGGCGGGCCATCATCGAGGGTGTGGCTGCGGTGCAGCGGGAAGACGGTAGCTTCAGTGCGACGATCGAGGGCAGCGAACAGGATATGCGGTTCGTGTACTGTGCGGCGGCGATCTGTGCCATGCTGAACGATTGGGGCCGTGTCGATCGCAAAAAGATGGCCGACTACATCCTCAAAAGCATCCGCTACGATTACGGCATTAGCCAGCACTACGAGATGGAATCGCACGGCGGCACCACGTTTTGTGCGATCGCGGCCCTGGAGCTGAGCGGCCAGCTGCACCTCCTTTCGGCCGACACGCGGGACAAGATCATCCGGTGGCTGGTGTTTCGCCAGCAGGACGGGTTCCAGGGCCGGCCGAACAAACCGGTCGACACGTGCTACTCGTTCTGGATAGCGGCCACGCTCAAGATACTGCACGCGTTCGAGCTGACCAGCTTCCAGGCCAACCGGGACTACGTGCTGTCGACGCAGGACCCGACGGTCGGCGGGTTTTCCAAGTGGCCCCAGGCCTACACCGACCCGTTCCACTCGTACTTTGGGCTGTGCGGGCTGAGCTTCCTGAACGAGCCGGGCCTGCAGGAGGTAATGCCGAGCTTAAACATATCGATGCGTGCCTACCGACGGTTGCAGGAGCTGCAGCGCAACTGGACGCTGCTAGAGGAGGGACTGGCGGCCGGCAATGGGGAGGTTACCGTGCACATAGAGTANGANGAGCAGTGGTAGTGGAACGGGCGCACTCAGAGACCGACACACACAAAAGGGGAACATAGAGCGCACAGAGAGCTGGTTGTTAAAATTTGTTTTGTTTTTTTTTGGGATAGTTTTCGTTGTTTTAGATGCAATTTTTAAAAGAA]

[+] EMBL BM599106             [CCGCGGACGCGTGGGCGGACGCGTGGGCGAGCACAGATACTTCTCCGGTTTCTTCCCGCGGGACCTTCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTGTTTTCATCCCTCGTCTAAAGAAACCTTCTCCTCCTCCACGTAAAACACGGATAACAGCATCCTTTCCTCCCGTGTGTGCTTTTGCTGTTTTGCGCATTTACACCGTATCTTCCGCGATCGAATCTCACGTTTCGTTTCTAATCGTGTGCAGCCGATCAAACACAACCACAGCCGCGTTTTCATAATCTTTCCGGTATTGCACAGCGTGAAGCTGGGTGGATATCTTAGCCTCATTATGGACAACAATATCGAAGGGGAGGAGGTGGAGTTCCGCAAACACGCCAAGTATTTTATACGATTTCTACACACACTGCCGGGTCGGTTGGCGTCGCACGATTCCACTCGAGTAACCATAGCCTTCTTTGCTGTCAGCGGGCTGGACGTGCTGGACTCGCTGCACATGCTGACCGACACCTTCCAGCAGGACATTTGCAACTGGATCTACAAGCTGCAGGTGGTGCCGAAACCGGGCGAACGGGGGTACGGTGGCATCCAGGGGTCCAGCACGTTCGATGTGATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM605494             [                                                                                                                                                                                                                                                                                                                          ccgATAATCTTTCCGGTATTGCACAGCGTGAAGCTGGGTGGATATCTAAGCCTCATCATGGACAACAATATCGAAGGGGAGGAGGTGGAGTTCCGCAAACACGCCAAGTACTTTATACGATTTCTACACACACTGCCGGGGCGATTGGCGTCGCACGATTCCACTCGAGTAACCATAGCCTTCTTTGCTGTCAGCGGGCTGGACGTGCTGGACTCGCTGCACATGCTGACCGACACCTTCCAGCAGGACATTTGCAACTGGATCTACAAGCTGCAGGTGGTGCCGAAACCGGGCGAACGGGGGTACGGTGGCATCCAGGGGTCCAGCACGTTCGATGTGATCGGTACGCCCGACTCCTGCGGGCTGCAGCTCTACCGGTGGGGCCATCTCGCCATCACGTACACGGGTATTGCTGTGCTGGTCGCGCTCGGGGACGATCTGTCGCGCCTCAATCGGCGGGCCATCATCGAGGGTGTGGCTGCGGTGCAGCGGGAAGACGGTAGCTTCAGTGCGACGATCGAGGGCAGCGAACAGGATATGCGGTTCGTGTACTGTGCGGCGGCGATCTGTGCCATGCTGAACGATTGGGGCCGTGTCGATCGCAAAAAGATGGCCGACTACATCCTCAAAAGCATCCGCTACGATTACGGCATTAGCCAGCACTACGAGATGGAATCGCACGGCGGCACCACGTTTTGTGCGATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX623179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCTGTGCCATGCTGAACGATTGGGGCCGTGTCGATCGCAAAAAGATGGCCGACTACATCCTCAAAAGCATCCGCTACGATTACGGCATTAGCCAGCACTACGAGATGGAATCGCACGGCGGCACCACGTTTTGTGCGATCGCGGCCCTGGAGCTGAGCGGCCAGCTGCACCTCCTTTCGGCCGACACGCGGGACAAGATCATCCGGTGGCTGGTGTTTCGCCAGCAGGACGGGTTCCAGGGCCGGCCGAACAAACCGGTCGACACGTGCTACTCGTTCTGGATAGCGGCCACGCTCAAGATACTGCACGCGTTCGAGCTGACCAGCTTCCAGGCCAACCGGGACTACGTGCTGTCGACGCAGGACCCGACGGTCGGCGGGTTTTCCAAGTGGCCCCAGGCCTACACCGACCCGTTCCACTCGTACTTTGGGCTGTGCGGGCTGAGCTTCCTGAACGAGCCGGGCCTGCAGGAGGTAATGCCGAGCTTAAACATATCGATGCGTGCCTACCGACGGTTGCAGGAGCTGCAGCGCAACTGGACGCTGCTAGAGGAGGGACTGGCGGCCGGCAATGGGGAGGTTACCGTGCACATAGAGTANGANGAGCAGTGGTAGTGGAACGGGCGCACTCAGAGAC                                                                                                             ]
[+] EMBL BX610884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTTGTGCGATCGCGGCCCTGGAGCTGAGCGGCCAGCTGCACCTCCTTTCGGCCGACACGCGGGACAAGATCATCCGGTGGCTGGTGTTTCGCCAGCAGGACGGGTTCCAGGGCCGGCCGAACAAACCGGTCGACACGTGCTACTCGTTCTGGATAGCGGCCACGCTCAAGATACTGCACGCGTTCGAGCTGACCAGCTTCCAGGCCAACCGGGACTACGTGCTGTCGACGCAGGACCCGACGGTCGGCGGGTTTTCCAAGTGGCCCCAGGCCTACACCGACCCGTTCCACTCGTACTTTGGGCTGTGCGGGCTGAGCTTCCTGAACGAGCCGGGCCTGCAGGAGGTAATGCCGAGCTTAAACATATCGATGCGTGCCTACCGACGGTTGCAGGAGCTGCAGCGCAACTGGACGCTGCTAGAGGAGGGACTGGCGGCCGGCAATGGGGAGGTTACCGTGCACATAGAGTAGGAGGAGCAGTGGTAGTGGAACGGGCGCACTCAGAGACCGACACACACAAAAGGGGAACATAGAGCGCACAGAGAGCTGGTTGTTAAAATTTGTTTTGTTTTTTTTTGGGATAGTTTTCGTTGTTTTAGATGCAATTTTTAAAAGAA]


>consensus_7335#0 CCGCGGACGCGTGGGCGGACGCGTGGGCGAGCACAGATACTTCTCCGGTTTCTTCCCGCG GGACCTTCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGA GAGTGTCCGAGTGTTGTTTTCATCCCTCGTCTAAAGAAACCTTCTCCTCCTCCACGTAAA ACACGGATAACAGCATCCTTTCCTCCCGTGTGTGCTTTTGCTGTTTTGCGCATTTACACC GTATCTTCCGCGATCGAATCTCACGTTTCGTTTCTAATCGTGTGCAGCCGATCAAACACA ACCACAGCCGCGTTTTCATAATCTTTCCGGTATTGCACAGCGTGAAGCTGGGTGGATATC TTAGCCTCATTATGGACAACAATATCGAAGGGGAGGAGGTGGAGTTCCGCAAACACGCCA AGTATTTTATACGATTTCTACACACACTGCCGGGTCGGTTGGCGTCGCACGATTCCACTC GAGTAACCATAGCCTTCTTTGCTGTCAGCGGGCTGGACGTGCTGGACTCGCTGCACATGC TGACCGACACCTTCCAGCAGGACATTTGCAACTGGATCTACAAGCTGCAGGTGGTGCCGA AACCGGGCGAACGGGGGTACGGTGGCATCCAGGGGTCCAGCACGTTCGATGTGATCGGTA CGCCCGACTCCTGCGGGCTGCAGCTCTACCGGTGGGGCCATCTCGCCATCACGTACACGG GTATTGCTGTGCTGGTCGCGCTCGGGGACGATCTGTCGCGCCTCAATCGGCGGGCCATCA TCGAGGGTGTGGCTGCGGTGCAGCGGGAAGACGGTAGCTTCAGTGCGACGATCGAGGGCA GCGAACAGGATATGCGGTTCGTGTACTGTGCGGCGGCGATCTGTGCCATGCTGAACGATT GGGGCCGTGTCGATCGCAAAAAGATGGCCGACTACATCCTCAAAAGCATCCGCTACGATT ACGGCATTAGCCAGCACTACGAGATGGAATCGCACGGCGGCACCACGTTTTGTGCGATCG CGGCCCTGGAGCTGAGCGGCCAGCTGCACCTCCTTTCGGCCGACACGCGGGACAAGATCA TCCGGTGGCTGGTGTTTCGCCAGCAGGACGGGTTCCAGGGCCGGCCGAACAAACCGGTCG ACACGTGCTACTCGTTCTGGATAGCGGCCACGCTCAAGATACTGCACGCGTTCGAGCTGA CCAGCTTCCAGGCCAACCGGGACTACGTGCTGTCGACGCAGGACCCGACGGTCGGCGGGT TTTCCAAGTGGCCCCAGGCCTACACCGACCCGTTCCACTCGTACTTTGGGCTGTGCGGGC TGAGCTTCCTGAACGAGCCGGGCCTGCAGGAGGTAATGCCGAGCTTAAACATATCGATGC GTGCCTACCGACGGTTGCAGGAGCTGCAGCGCAACTGGACGCTGCTAGAGGAGGGACTGG CGGCCGGCAATGGGGAGGTTACCGTGCACATAGAGTANGANGAGCAGTGGTAGTGGAACG GGCGCACTCAGAGACCGACACACACAAAAGGGGAACATAGAGCGCACAGAGAGCTGGTTG TTAAAATTTGTTTTGTTTTTTTTTGGGATAGTTTTCGTTGTTTTAGATGCAATTTTTAAA AGAA



consensusID : consensus_7335#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 934
fasta sequence
                              [CCCAGGATTAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTATTCGTTATTATTATTTAACCCGCTGCCGAGCTCAGATACTATCTCAGGTTTCTATCCCGCGGGANCTATCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTATGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTTGTTTTCATACCCTCGTCTAAAGAAACTCTTCTACCTCCTCCACGTAATAATACACGGACAACAGCATCCTTTCCTCCCGTGTGTGCTATTATGCTNGTATTATTGCGCATTTACACCGTATCTTACCGCGATCGAATCTACACGTTTCGTATTCTAATCGTGTGCAGCCGATACAAACACAACCACAGCCGACGTTANTCATAATCTATTCCGGTCATTGCACAGCGTGAAGCTGGGTGGCTATCTAAGCCTCATCATGGACCAACAATATCGNNNGGGGAGGAGGTGGAGTTCCGCAAACACGGCCAAGTACTCTTATACGATNTTCTACACACACTGCCGAGNGCAGATTTGGCGTCNGCAACGATATCCACTCGAGTAAANCATAGCCTTCTTTGCTTGTCAGCGGGCTTGGACGTGCTCGGACTCGCTGCACATGCTGAACCGAACCTTCCAGCAGGACATNCTGCNAACTGGNTTCTAACAAGCTNGCAANTGGTGCCCGAAACCCTNGGGGCTGAAAAAGGAGNGTAACAGAGTGGCAACTACCANGGTGTCACCAGCACGTTACCAATAGTAGATCGGTAANGCCCGGATCCTGACGGNAGCTTAGACGACTACTAACACGATTGGGGCCACACTTCGNCCANCAAAGTTAACCGGGGTTATATGCTNGACGCCTGNCTACCCTCCNCGACNAAAANGTCNGNCNACAATCNNGCGACCTCAACANGNTGTAATAGCCAGACN]

[+] EMBL AL931000             [CCCAGGATTAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTATTCGTTATTATTATTTAACCCGCTGCCGAGCTCAGATACTATCTCAGGTTTCTATCCCGCGGGANCTATCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTATGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTTGTTTTCATACCCTCGTCTAAAGAAACTCTTCTACCTCCTCCACGTAATAATACACGGACAACAGCATCCTTTCCTCCCGTGTGTGCTATTATGCTNGTATTATTGCGCATTTACACCGTATCTTACCGCGATCGAATCTACACGTTTCGTATTCTAATCGTGTGCAGCCGATACAAACACAACCACAGCCGACGTTANTCATAATCTATTCCGGTCATTGCACAGCGTGAAGCTGGGTGGCTATCTAAGCCTCATCATGGACCAACAATATCGNNNGGGGAGGAGGTGGAGTTCCGCAAACACGGCCAAGTACTCTTATACGATNTTCTACACACACTGCCGAGNGCAGATTTGGCGTCNGCAACGATATCCACTCGAGTAAANCATAGCCTTCTTTGCTTGTCAGCGGGCTTGGACGTGCTCGGACTCGCTGCACATGCTGAACCGAACCTTCCAGCAGGACATNCTGCNAACTGGNTTCTAACAAGCTNGCAANTGGTGCCCGAAACCCTNGGGGCTGAAAAAGGAGNGTAACAGAGTGGCAACTACCANGGTGTCACCAGCACGTTACCAATAGTAGATCGGTAANGCCCGGATCCTGACGGNAGCTTAGACGACTACTAACACGATTGGGGCCACACTTCGNCCANCAAAGTTAACCGGGGTTATATGCTNGACGCCTGNCTACCCTCCNCGACNAAAANGTCNGNCNACAATCNNGCGACCTCAACANGNTGTAATAGCCAGACN]


>consensus_7335#1 CCCAGGATTAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTATTCGTTATTATTATT TAACCCGCTGCCGAGCTCAGATACTATCTCAGGTTTCTATCCCGCGGGANCTATCACCGG AGCGGCATGAAGCGAACGGGTGTGTGCTGTATGAGTGCGCGAAGTTGAGAGTGTCCGAGT GTTTGTTTTCATACCCTCGTCTAAAGAAACTCTTCTACCTCCTCCACGTAATAATACACG GACAACAGCATCCTTTCCTCCCGTGTGTGCTATTATGCTNGTATTATTGCGCATTTACAC CGTATCTTACCGCGATCGAATCTACACGTTTCGTATTCTAATCGTGTGCAGCCGATACAA ACACAACCACAGCCGACGTTANTCATAATCTATTCCGGTCATTGCACAGCGTGAAGCTGG GTGGCTATCTAAGCCTCATCATGGACCAACAATATCGNNNGGGGAGGAGGTGGAGTTCCG CAAACACGGCCAAGTACTCTTATACGATNTTCTACACACACTGCCGAGNGCAGATTTGGC GTCNGCAACGATATCCACTCGAGTAAANCATAGCCTTCTTTGCTTGTCAGCGGGCTTGGA CGTGCTCGGACTCGCTGCACATGCTGAACCGAACCTTCCAGCAGGACATNCTGCNAACTG GNTTCTAACAAGCTNGCAANTGGTGCCCGAAACCCTNGGGGCTGAAAAAGGAGNGTAACA GAGTGGCAACTACCANGGTGTCACCAGCACGTTACCAATAGTAGATCGGTAANGCCCGGA TCCTGACGGNAGCTTAGACGACTACTAACACGATTGGGGCCACACTTCGNCCANCAAAGT TAACCGGGGTTATATGCTNGACGCCTGNCTACCCTCCNCGACNAAAANGTCNGNCNACAA TCNNGCGACCTCAACANGNTGTAATAGCCAGACN



consensusID : consensus_7335#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 742
fasta sequence
                              [AAGCGCACCAGCAGCAGCAAAAAAAAAAAGATCAAAAGAAAAACAGCCAAAACACACGCAAAGTGAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTTTCGTTATTATTATTTAACCCGCTGCCGAGCTCAGATACTTCTCAGGTTTCTTCCCGCGGGACCTTCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTGTTTTCATCCCTCGTCTAAAGAAACCTTCTCCTCCTCCACGTAATAATACACGGACAACAGCATCCTTTCCTCCCGTGTGTGCTTTTGCTGTTTTGCGCATTTACACCGTATCTTCCGCGATCGAATCTCACGTTTCGTTTCTAATCGTGTGCAGCCGATCAAACACAACCACAGCCGCGTTTTCATAATCTTTCCGGTATTGCACAGCGTGAAGCTGGGTGGATATCTAAGCCTCATCATGGACAACAATATCGAAGGGGAGGAGGTGGAGTTCCGCAAACACGCCAAGTACTTTATACGATTTCTACACACACTGCCGGGGCGATTGGCGTCGCACGATTCCACTCGAGTAACCATAGCCTTCTTTGCTGTCAGCACGTTCGATGTGATCGGTACGCCCGACTCCTGCGGGCTGCAGCTCTACCGGTGGGGGCATCTCGCCATCACGTACACGGTATTGCTGTGCTGGTCGCGCTCGGGGACGATCTGTCGCGCCTCAATCCGGCG]

[+] EMBL BX626419             [AAGCGCACCAGCAGCAGCAAAAAAAAAAAGATCAAAAGAAAAACAGCCAAAACACACGCAAAGTGAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTTTCGTTATTATTATTTAACCCGCTGCCGAGCTCAGATACTTCTCAGGTTTCTTCCCGCGGGACCTTCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTGTTTTCATCCCTCGTCTAAAGAAACCTTCTCCTCCTCCACGTAATAATACACGGACAACAGCATCCTTTCCTCCCGTGTGTGCTTTTGCTGTTTTGCGCATTTACACCGTATCTTCCGCGATCGAATCTCACGTTTCGTTTCTAATCGTGTGCAGCCGATCAAACACAACCACAGCCGCGTTTTCATAATCTTTCCGGTATTGCACAGCGTGAAGCTGGGTGGATATCTAAGCCTCATCATGGACAACAATATCGAAGGGGAGGAGGTGGAGTTCCGCAAACACGCCAAGTACTTTATACGATTTCTACACACACTGCCGGGGCGATTGGCGTCGCACGATTCCACTCGAGTAACCATAGCCTTCTTTGCTGTCAGCACGTTCGATGTGATCGGTACGCCCGACTCCTGCGGGCTGCAGCTCTACCGGTGGGGGCATCTCGCCATCACGTACACGGTATTGCTGTGCTGGTCGCGCTCGGGGACGATCTGTCGCGCCTCAATCCGGCG]


>consensus_7335#2 AAGCGCACCAGCAGCAGCAAAAAAAAAAAGATCAAAAGAAAAACAGCCAAAACACACGCA AAGTGAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTTTCGTTATTATTATTTAACC CGCTGCCGAGCTCAGATACTTCTCAGGTTTCTTCCCGCGGGACCTTCACCGGAGCGGCAT GAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTGTTTTC ATCCCTCGTCTAAAGAAACCTTCTCCTCCTCCACGTAATAATACACGGACAACAGCATCC TTTCCTCCCGTGTGTGCTTTTGCTGTTTTGCGCATTTACACCGTATCTTCCGCGATCGAA TCTCACGTTTCGTTTCTAATCGTGTGCAGCCGATCAAACACAACCACAGCCGCGTTTTCA TAATCTTTCCGGTATTGCACAGCGTGAAGCTGGGTGGATATCTAAGCCTCATCATGGACA ACAATATCGAAGGGGAGGAGGTGGAGTTCCGCAAACACGCCAAGTACTTTATACGATTTC TACACACACTGCCGGGGCGATTGGCGTCGCACGATTCCACTCGAGTAACCATAGCCTTCT TTGCTGTCAGCACGTTCGATGTGATCGGTACGCCCGACTCCTGCGGGCTGCAGCTCTACC GGTGGGGGCATCTCGCCATCACGTACACGGTATTGCTGTGCTGGTCGCGCTCGGGGACGA TCTGTCGCGCCTCAATCCGGCG



consensusID : consensus_7335#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 365
fasta sequence
                              [CCGCGCAAGGTGAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTTTCGTTATTATTATTTAACCCGCTGCCGAGCACAGATACTTCTCCGGTTTCTTCCCGCGGGACCTTCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTGTTTTCATCCCTCGTCTAAAGGAAAACCTTCTCCTCCTCCACGTAAAACACGGACAACAGCATCCTTTCCTCCCGTGTGTGTGTGTGGTGCTTTTGCTGTTTTGCGCATTTACACCGTATCTTCCGCGATCGAATCTTACGTTTCGGTTTCTAATCGTGTGCACACACAGCCACAGTCACGTTT]

[+] EMBL BM628249             [CCGCGCAAGGTGAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTTTCGTTATTATTATTTAACCCGCTGCCGAGCACAGATACTTCTCCGGTTTCTTCCCGCGGGACCTTCACCGGAGCGGCATGAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTGTTTTCATCCCTCGTCTAAAGGAAAACCTTCTCCTCCTCCACGTAAAACACGGACAACAGCATCCTTTCCTCCCGTGTGTGTGTGTGGTGCTTTTGCTGTTTTGCGCATTTACACCGTATCTTCCGCGATCGAATCTTACGTTTCGGTTTCTAATCGTGTGCACACACAGCCACAGTCACGTTT]


>consensus_7335#3 CCGCGCAAGGTGAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTTTCGTTATTATTA TTTAACCCGCTGCCGAGCACAGATACTTCTCCGGTTTCTTCCCGCGGGACCTTCACCGGA GCGGCATGAAGCGAACGGGTGTGTGCTGTTGAGTGCGCGAAGTTGAGAGTGTCCGAGTGT TGTTTTCATCCCTCGTCTAAAGGAAAACCTTCTCCTCCTCCACGTAAAACACGGACAACA GCATCCTTTCCTCCCGTGTGTGTGTGTGGTGCTTTTGCTGTTTTGCGCATTTACACCGTA TCTTCCGCGATCGAATCTTACGTTTCGGTTTCTAATCGTGTGCACACACAGCCACAGTCA CGTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7335#1      --------------------------------------------------------CCCA 4
consensus_7335#3      -----------------------------------------------------CCGCGCA 7
consensus_7335#2      AAGCGCACCAGCAGCAGCAAAAAAAAAAAGATCAAAAGAAAAACAGCCAAAACACACGCA 60
consensus_7335#0      ------------------------------------------------------------
                                                                                  

consensus_7335#1      GGATTAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCTATTCGTTATTATTATTTAAC 64
consensus_7335#3      AGGTGAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCT-TTCGTTATTATTATTTAAC 66
consensus_7335#2      AAGTGAAATGACTCGTCGTCGGTCGTCGGACAAACGTTCT-TTCGTTATTATTATTTAAC 119
consensus_7335#0      ----------------------------------------CCGCGGACGCGTGGGCGGAC 20
                                                                 **      *      **

consensus_7335#1      CCGCTGCCGAGCTCAGATACTATCTCAGGTTTCTATCCCGCGGGANCTATCACCGGAGCG 124
consensus_7335#3      CCGCTGCCGAGCACAGATACT-TCTCCGGTTTCT-TCCCGCGGGACCT-TCACCGGAGCG 123
consensus_7335#2      CCGCTGCCGAGCTCAGATACT-TCTCAGGTTTCT-TCCCGCGGGACCT-TCACCGGAGCG 176
consensus_7335#0      GCGTGGGCGAGCACAGATACT-TCTCCGGTTTCT-TCCCGCGGGACCT-TCACCGGAGCG 77
                       **  * ***** ******** **** ******* ********** ** ***********

consensus_7335#1      GCATGAAGCGAACGGGTGTGTGCTGTATGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTTT 184
consensus_7335#3      GCATGAAGCGAACGGGTGTGTGCTGT-TGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTT- 181
consensus_7335#2      GCATGAAGCGAACGGGTGTGTGCTGT-TGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTT- 234
consensus_7335#0      GCATGAAGCGAACGGGTGTGTGCTGT-TGAGTGCGCGAAGTTGAGAGTGTCCGAGTGTT- 135
                      ************************** ******************************** 

consensus_7335#1      GTTTTCATACCCTCGTCTAAAGAAACTCTTCTACCTCCTCCACGTAATAATACACGGACA 244
consensus_7335#3      GTTTTCAT-CCCTCGTCTAAAGGAAAACCTTCTCCTCCTCCACGTAAAA---CACGGACA 237
consensus_7335#2      GTTTTCAT-CCCTCGTCTAAAGAAAC-CTTCT-CCTCCTCCACGTAATAATACACGGACA 291
consensus_7335#0      GTTTTCAT-CCCTCGTCTAAAGAAAC-CTTCT-CCTCCTCCACGTAAAA---CACGGATA 189
                      ******** ************* **  * *   ************** *   ****** *

consensus_7335#1      ACAGCATCCTTTCCTCCCGTGTGTGC-TATTATGCTNGTATTATT--GCGCATTTACACC 301
consensus_7335#3      ACAGCATCCTTTCCTCCCGTGTGTGTGTGTGGTGCTTTTGCTGTTTTGCGCATTTACACC 297
consensus_7335#2      ACAGCATCCTTTCCTCCCGTGTGTGC---------TTTTGCTGTTTTGCGCATTTACACC 342
consensus_7335#0      ACAGCATCCTTTCCTCCCGTGTGTGC---------TTTTGCTGTTTTGCGCATTTACACC 240
                      *************************          *  *  * **  *************

consensus_7335#1      GTATCTTACCGCGATCGAATCTACACGTTTCGTATTCTAATCGTGTGCAGCCGATACAAA 361
consensus_7335#3      GTATCTT-CCGCGATCGAATCT-TACGTTTCGGTTTCTAATCGTGTGCAC---ACACAGC 352
consensus_7335#2      GTATCTT-CCGCGATCGAATCT-CACGTTTCGT-TTCTAATCGTGTGCAGCCGAT-CAAA 398
consensus_7335#0      GTATCTT-CCGCGATCGAATCT-CACGTTTCGT-TTCTAATCGTGTGCAGCCGAT-CAAA 296
                      ******* **************  ********  ***************    *  **  

consensus_7335#1      CACAACCACAGCCGACGTTANTCATAATCTATTCCGGTCATTGCACAGCGTGAAGCTGGG 421
consensus_7335#3      CACAGTCACGTTT----------------------------------------------- 365
consensus_7335#2      CACAACCACAGCCG-CGTT-TTCATAATCT-TTCCGGT-ATTGCACAGCGTGAAGCTGGG 454
consensus_7335#0      CACAACCACAGCCG-CGTT-TTCATAATCT-TTCCGGT-ATTGCACAGCGTGAAGCTGGG 352
                      ****  ***                                                   

consensus_7335#1      TGGCTATCTAAGCCTCATCATGGACCAACAATATCGNNNGGGGAGGAGGTGGAGTTCCGC 481
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      TGGATATCTAAGCCTCATCATGGAC-AACAATATCGAAGGGG-AGGAGGTGGAGTTCCGC 512
consensus_7335#0      TGGATATCTTAGCCTCATTATGGAC-AACAATATCGAAGGGG-AGGAGGTGGAGTTCCGC 410
                                                                                  

consensus_7335#1      AAACACGGCCAAGTACTCTTATACGATNTTCTACACACACTGCCGAGNGCAGATTTGGCG 541
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      AAACACG-CCAAGTACT-TTATACGATTT-CTACACACACTGCCGGGGCGA---TTGGCG 566
consensus_7335#0      AAACACG-CCAAGTATT-TTATACGATTT-CTACACACACTGCCGGGTCGG---TTGGCG 464
                                                                                  

consensus_7335#1      TCNGCAACGATATCCACTCGAGTAAANCATAGCCTTCTTTGCTTGTCAGCGGGCTTGGAC 601
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      TCGC--ACGAT-TCCACTCGAGTAA-CCATAGCCTTCTTTGCT-GTCAGCACG-TTCGAT 620
consensus_7335#0      TCGC--ACGAT-TCCACTCGAGTAA-CCATAGCCTTCTTTGCT-GTCAGCGGG-CTGGAC 518
                                                                                  

consensus_7335#1      GTGCTCGG-ACTCGCTGCACATGCTGAACCGAAC-CTTCCAGCAGGA-CATNCTGCNAAC 658
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      GTGATCGGTACGCCCGACTCCTGCGGGCTGCAGCTCTACCGGTGGGGGCATCTCGCCATC 680
consensus_7335#0      GTGCTGG--ACTCGCTGCACATGCTGACCGACAC-CTTCCAGCAGGA---CATTTGCAAC 572
                                                                                  

consensus_7335#1      TGGNTTCTAACAAGCTNGCAANTGGTGCCCGAAACCCTNGGGGCTGAAAAAGGAGNGTAA 718
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ACGT-----ACACGGTATTGCT--GTGCTGGTCGCGCTCGGGGACGATCT-GTCGCGCCT 732
consensus_7335#0      TGGATCT--ACAAGCTG-CAGGTGGTGCCGAAACCGGGCGAACGGGGGTACGGTGGCATC 629
                                                                                  

consensus_7335#1      CAGAGTGGCAACTACCANGGTGTCACCAGCACGTTACCAATAGTAGATCGGTAANGCCCG 778
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      CAATCCGGCG-------------------------------------------------- 742
consensus_7335#0      CAGGGGTCCAGCACGTTCGATGTGATCGGTACGC--CCGACTCCTGCGGGCTGCAGCTCT 687
                                                                                  

consensus_7335#1      GATCCTGACGGNAGCTTAGACGACTACTAACACGATTGGGGCCACACT--TCGNCCANCA 836
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      ACCGGTGGGGCCATCTC--GCCATCACGTACACGGGTATTGCTGTGCTGGTCGCGCTCGG 745
                                                                                  

consensus_7335#1      AAGTTAACCGGGGTTATATGCTNGACGCCTGNCTACCCTCCNCGACNAAAANGTCNGNCN 896
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GGACGATCTGTCGCGCCTCAATCGGCGGGCCATCATCGAGGGTGTGGCTGCGGTGCAGCG 805
                                                                                  

consensus_7335#1      ACAATCNNGCGACCTCAACANGNTGTAATAGCCAGACN---------------------- 934
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GGAAGACGGTAGCTTCAGTGCGACGATCGAGGGCAGCGAACAGGATATGCGGTTCGTGTA 865
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      CTGTGCGGCGGCGATCTGTGCCATGCTGAACGATTGGGGCCGTGTCGATCGCAAAAAGAT 925
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GGCCGACTACATCCTCAAAAGCATCCGCTACGATTACGGCATTAGCCAGCACTACGAGAT 985
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GGAATCGCACGGCGGCACCACGTTTTGTGCGATCGCGGCCCTGGAGCTGAGCGGCCAGCT 1045
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GCACCTCCTTTCGGCCGACACGCGGGACAAGATCATCCGGTGGCTGGTGTTTCGCCAGCA 1105
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GGACGGGTTCCAGGGCCGGCCGAACAAACCGGTCGACACGTGCTACTCGTTCTGGATAGC 1165
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GGCCACGCTCAAGATACTGCACGCGTTCGAGCTGACCAGCTTCCAGGCCAACCGGGACTA 1225
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      CGTGCTGTCGACGCAGGACCCGACGGTCGGCGGGTTTTCCAAGTGGCCCCAGGCCTACAC 1285
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      CGACCCGTTCCACTCGTACTTTGGGCTGTGCGGGCTGAGCTTCCTGAACGAGCCGGGCCT 1345
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GCAGGAGGTAATGCCGAGCTTAAACATATCGATGCGTGCCTACCGACGGTTGCAGGAGCT 1405
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GCAGCGCAACTGGACGCTGCTAGAGGAGGGACTGGCGGCCGGCAATGGGGAGGTTACCGT 1465
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      GCACATAGAGTANGANGAGCAGTGGTAGTGGAACGGGCGCACTCAGAGACCGACACACAC 1525
                                                                                  

consensus_7335#1      ------------------------------------------------------------
consensus_7335#3      ------------------------------------------------------------
consensus_7335#2      ------------------------------------------------------------
consensus_7335#0      AAAAGGGGAACATAGAGCGCACAGAGAGCTGGTTGTTAAAATTTGTTTTGTTTTTTTTTG 1585
                                                                                  

consensus_7335#1      ---------------------------------------
consensus_7335#3      ---------------------------------------
consensus_7335#2      ---------------------------------------
consensus_7335#0      GGATAGTTTTCGTTGTTTTAGATGCAATTTTTAAAAGAA 1624
                                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)