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Anopheles gambiae
cluster # 7338 cluster # 7338       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7338#0 length = 1234 sequences # 4  
consensus_7338#1 length = 649 sequences # 1  
consensus_7338#2 length = 544 sequences # 1  
consensus_7338#3 length = 469 sequences # 1  

consensusID : consensus_7338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1234
fasta sequence
                              [CCGGTTAAATAATTCAAAGTTTTTTGGAACTGAGCAGATAATTTTGCGTGTGCTAATTATATCGCTTCTTTTTTAGCTATATATCTTTGACTCTTATTGGAAACACGTGTTCTTTGTTGAGAATGTCTGCTTCAGCGGATTCACTCCCAATTCTCATTCGCTTTCTTCGTTGGGGATGTATTGTTCATAATATTTTGGTTCTATGTCACGGTCGCCATGTACTATCCACCATTTGGTACATGATATGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGATATGTATTTTGAAGTCAACTAAAGAGTGAGTGAGTGATGAGCTATCGAGCTGCTTATATACCGCATGGTTGCTATGTATTACCATTGCATTTTCGTTATCCATTATCCCTGTGGTAACTGGGATCCAACAGAATAGATTCAGGGTTCACAAATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAGAACACTTAGCACTTCACTTAATATGTTTTACGCTTTTATTTGCTTAACGTTTGTGTCACATGAGGTATCGATTTGGTGATTCCAATTAGAACTTGGCTTCCTCGTTCGGCGGATCCCTATTAATACTGGATGGTTCCTACAGCGGCTTATCGTGCGCATAGAGATTCTCTTCTTCAAAACTACTCCAAATCGTTGAAGCGTAGCGGTACATAATGTTTCGATTGAGAATTGTTCTGCATTTAAAACTTAAAAGCTGCGATGCGCGTTGCTCTTTGAGCGCTTGTGTGTATAGTAAAACATATAAAACATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAACAAAAAACATTCTTTCGCGCTATGTATTTATAAATTTCAAATCAACTCAGCGGACATGTGCACAATGTTCTTATCATAAGATAAAAGATAAAAAAAAGACATGGTCAATACTTACGAGAATAATGTATTTGCATAGGTATGATAGGTAGTTTAAGTAAGCTTGCTGTATTAAATCGAGAGCAAAAGAACAAGCAACAACAAAGGAAAAACAATAAGAAACCGATATCCTTCAGCAGTGATGTGTGGTTAGCAATCGTGTTAGCACTCGTTGTCAATTGTAAAATGTGAGGAAAATAGCAACAGAAAACGTATCATGAAACTCCTTGACTGCTACTGCGCGATAGTTAACACATCTGTTGCAGATCTACTAGCTTGTCTTGTAGCTAGTCGACCATTCGGGCTGTACACA]

[+] EMBL BM594885             [CCGGTTAAATAATTCAAAGTTTTTTGGAACTGAGCAGATAATTTTGCGTGTGCTAATTATATCGCTTCTTTTTTAGCTATATATCTTTGACTCTTATTGGAAACACGTGTTCTTTGTTGAGAATGTCTGCTTCAGCGGATTCACTCCCAATTCTCATTCGCTTTCTTCGTTGGGGATGTATTGTTCATAATATTTTGGTTCTATGTCACGGTCGCCATGTACTATCCACCATTTGGTACATGATATGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGATATGTATTTTGAAGTCAACTAAAGAGTGAGTGAGTGATGAGCTATCGAGCTGCTTATATACCGCATGGTTGCTATGTATTACCATTGCATTTTCGTTATCCATTATCCCTGTGGTAACTGGGATCCAACAGAATAGATTCAGGGTTCACAAATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAGAACACTTAGCACTTCACTTAATATGTTTTACGCTTTTATTTGCTTAACGTTTGTGTCACATGAGGTATCGATTTGGTGATTCCAATTAGAACTTGGCTTCCTCGTTCGGCGGATCCCTATTAATACTGGATGGTTCCTACAGCGGCTTATCGTGCGCATAGAGATTCTCTTCTTCAAAACTACTCCAAATCGTTGAAGCGTAGCGGTACATAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM649545             [                            ccgGAGCAGATAATTTTGCGTGTGCTAATTATATCGCTTCTTTTTTAGCTATATATCTTTGACTCTTATTGGAAACACGTGTTCTTTGTTGAGAATGTCTGCTTCAGCGGATTCACTCCCAATTCTCATTCGCTTTCTTCGTTGGGGATGTATTGTTCATAATATTTTGGTTCTATGTCACGGTCGCCATGTACTATCCACCATTTGGTACATGATATGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGATATGTATTTTGAAGTCAACTAAAGAGTGAGTGAGTGATGAGCTATCGAGCTGCTTATATACCGCATGGTTGCTATGTATTACCATTGCATTTTCGTTATCCATTATCCCTGTGGTAACTGGGATCCAACAGAATAGATTCAGGGTTCACAAATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAGAACACTTAGCACTTCACTTAATATGTTTTACGCTTTTATTTGCTTAACGTTTGTGTCACATGAGGTATCGATTTGGTGATTCCAATTAGAACTTGGCTTCCTCGTTCGGCGGATCCCTATTAATACTGGATGGTTCCTACAGCGGCTTATCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX622600             [                                                                                                                                                                                                                                                                                                                                      ATGAGCTATCGAGCTGCTTATATACTGCATGGTTGCTATGTATTACCATTGCATTTTCGTTATCCATTATCCCTGTGGTAACTGGGATCCAACAGAATAGATTCAGGGTTCACAAATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAGAACACTTAGCACTTCACTTAATATGTTTTGCGCTTTTATTTGCTTAACGTTTGTGTCACATGTGGTATCGATTTGGCGATTCCAATTGGAACTTGGCTTCCTCGTTCGGCGGATCCCTATTAATACTGGATGGTTCCTACAGCGGCTTATCGTGCGCATAGAATTTCTCTTCTTCAAAACTACTCCAAATCGTTGAAGCGTAGCGGTACATAATGTTTCGATTGAGAATTGTTCTGCATTTAAAACTTAAAAGCTGCGATGCGCGTTGCTCTTTGAGCGCTTGTGTGTATAGTAAAACATATAAAACATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAACAAAAAACATTCTTTCGCGCTATGTATTTATAAATTTCAAATCAACTCAGCGGACATGTGCACAATGTT                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX624193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAAGCAAAACAAACAAA AAAAAACATTCTTTCGCGCTATGTATTTATAAATTTCAAATCAACTCAGCGGACATGTGCACAATGTTCTTATCATAAGATAAAAGATAAAAAAAAGACATGGTCAATACTTACGAGAATAATGTATTTGCATAGGTATGATAGGTAGTTTAAGTAAGCTTGCTGTATTAAATCGAGAGCAAAAGAACAAGCAACAACAAAGGAAAAACAATAAGAAACCGATATCCTTCAGCAGTGATGTGTGGTTAGCAATCGTGTTAGCACTCGTTGTCAATTGTAAAATGTGAGGAAAATAGCAACAGAAAACGTATCATGAAACTCCTTGACTGCTACTGCGCGATAGTTAACACATCTGTTGCAGATCTACTAGCTTGTCTTGTAGCTAGTCGACCATTCGGGCTGTACACA]


>consensus_7338#0 CCGGTTAAATAATTCAAAGTTTTTTGGAACTGAGCAGATAATTTTGCGTGTGCTAATTAT ATCGCTTCTTTTTTAGCTATATATCTTTGACTCTTATTGGAAACACGTGTTCTTTGTTGA GAATGTCTGCTTCAGCGGATTCACTCCCAATTCTCATTCGCTTTCTTCGTTGGGGATGTA TTGTTCATAATATTTTGGTTCTATGTCACGGTCGCCATGTACTATCCACCATTTGGTACA TGATATGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGATATGTATTTT GAAGTCAACTAAAGAGTGAGTGAGTGATGAGCTATCGAGCTGCTTATATACCGCATGGTT GCTATGTATTACCATTGCATTTTCGTTATCCATTATCCCTGTGGTAACTGGGATCCAACA GAATAGATTCAGGGTTCACAAATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAG AACACTTAGCACTTCACTTAATATGTTTTACGCTTTTATTTGCTTAACGTTTGTGTCACA TGAGGTATCGATTTGGTGATTCCAATTAGAACTTGGCTTCCTCGTTCGGCGGATCCCTAT TAATACTGGATGGTTCCTACAGCGGCTTATCGTGCGCATAGAGATTCTCTTCTTCAAAAC TACTCCAAATCGTTGAAGCGTAGCGGTACATAATGTTTCGATTGAGAATTGTTCTGCATT TAAAACTTAAAAGCTGCGATGCGCGTTGCTCTTTGAGCGCTTGTGTGTATAGTAAAACAT ATAAAACATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAACAAAAAACATTCTTT CGCGCTATGTATTTATAAATTTCAAATCAACTCAGCGGACATGTGCACAATGTTCTTATC ATAAGATAAAAGATAAAAAAAAGACATGGTCAATACTTACGAGAATAATGTATTTGCATA GGTATGATAGGTAGTTTAAGTAAGCTTGCTGTATTAAATCGAGAGCAAAAGAACAAGCAA CAACAAAGGAAAAACAATAAGAAACCGATATCCTTCAGCAGTGATGTGTGGTTAGCAATC GTGTTAGCACTCGTTGTCAATTGTAAAATGTGAGGAAAATAGCAACAGAAAACGTATCAT GAAACTCCTTGACTGCTACTGCGCGATAGTTAACACATCTGTTGCAGATCTACTAGCTTG TCTTGTAGCTAGTCGACCATTCGGGCTGTACACA



consensusID : consensus_7338#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 649
fasta sequence
                              [GGCAAGAATCGGCACGATNGGGAACTGAGCAGATAGTTTTGCGTGTGCTCATTATATCGCTTCTTTTTTAGCTACATATCTTTGACTCTTATTGGAAACACGTGTTCCTTGTTGAGAATGTCTTCTTCAGTGGATTCACTCCCAACTCTCATTCGCTTTCTTCGTTGGGGATGTATTGTTCATAATATTTTGGCTCTATGTCACGGTCGCCATGTACTATCCACCATTTGGTATATGATATGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGATATGTATTTTGAAGTCAACTAAAGAGTGAGTGAGTGATGGTTGCTATGTATTACCATTGCATTTTCGTTATCCATTATCCCTGTGGTAACTGGGATCCAACAGTATAGATTCAGGGTTAACAAATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAGAACACTTAGCACTTCACTTAATCATTTTGTACGCTTTGATTTGCTTAACGTACAGTGTCACATGAGGTATCGATNTCGGCGATTCCAATTGGAACTTGGCTTCCTCGTACGGCGGATCCCGTAATNAANTACTGAAATGGTGTAGGAAGGCTGTAGGAGGCTTAATCGTGCGCATAGGAATTACTCTTCTNCAACAAACNTT]

[+] EMBL BX467197             [GGCAAGAATCGGCACGATNGGGAACTGAGCAGATAGTTTTGCGTGTGCTCATTATATCGCTTCTTTTTTAGCTACATATCTTTGACTCTTATTGGAAACACGTGTTCCTTGTTGAGAATGTCTTCTTCAGTGGATTCACTCCCAACTCTCATTCGCTTTCTTCGTTGGGGATGTATTGTTCATAATATTTTGGCTCTATGTCACGGTCGCCATGTACTATCCACCATTTGGTATATGATATGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGATATGTATTTTGAAGTCAACTAAAGAGTGAGTGAGTGATGGTTGCTATGTATTACCATTGCATTTTCGTTATCCATTATCCCTGTGGTAACTGGGATCCAACAGTATAGATTCAGGGTTAACAAATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAGAACACTTAGCACTTCACTTAATCATTTTGTACGCTTTGATTTGCTTAACGTACAGTGTCACATGAGGTATCGATNTCGGCGATTCCAATTGGAACTTGGCTTCCTCGTACGGCGGATCCCGTAATNAANTACTGAAATGGTGTAGGAAGGCTGTAGGAGGCTTAATCGTGCGCATAGGAATTACTCTTCTNCAACAAACNTT]


>consensus_7338#1 GGCAAGAATCGGCACGATNGGGAACTGAGCAGATAGTTTTGCGTGTGCTCATTATATCGC TTCTTTTTTAGCTACATATCTTTGACTCTTATTGGAAACACGTGTTCCTTGTTGAGAATG TCTTCTTCAGTGGATTCACTCCCAACTCTCATTCGCTTTCTTCGTTGGGGATGTATTGTT CATAATATTTTGGCTCTATGTCACGGTCGCCATGTACTATCCACCATTTGGTATATGATA TGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGATATGTATTTTGAAGT CAACTAAAGAGTGAGTGAGTGATGGTTGCTATGTATTACCATTGCATTTTCGTTATCCAT TATCCCTGTGGTAACTGGGATCCAACAGTATAGATTCAGGGTTAACAAATGGATATCATC GGCTAATCGAGAGAAACTCGGACTCAGAACACTTAGCACTTCACTTAATCATTTTGTACG CTTTGATTTGCTTAACGTACAGTGTCACATGAGGTATCGATNTCGGCGATTCCAATTGGA ACTTGGCTTCCTCGTACGGCGGATCCCGTAATNAANTACTGAAATGGTGTAGGAAGGCTG TAGGAGGCTTAATCGTGCGCATAGGAATTACTCTTCTNCAACAAACNTT



consensusID : consensus_7338#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence
                              [ACACTCCAAATCGTTGAAGCTAGCGATACTAATGTTTCGATTAAGAATTGTACTGCATTTTATACTTAAAAGCTGCCATGCGTATTGCTCTATGAGTGCTTGTGTGTATAGTAAAACATATAAAACATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAAAAAAAACATTCTTTCGCGCTATGTATTTATAAATTTCAAATCAACTCAAGCGGACATGTGCACAAATGTTCCTAATCATAAGAATAAAAAGATAAAAAAANAGACATGGGTCAANTACNNACGAGNNTAANGTANNGGCATAGGTATGATAGGTAGTTAAGTAAGCTGGCTGTATNAATCGAGAGCAAAAAACAGCACAACANNNANAACATAAGAAACCGATATCNTCAGCANNGATGTGTGGNNGCATCGTGTAGCACTCGTTGTCNNNGTAAATGTGAGGAAAATACCACAGAAACCTATNTGAACTCCNNACTGCTACTGCCCATANTACACTCTGTGCAATTCTACTGTTGTACATCACATCGGCGTCCTCTACC]

[+] EMBL BX619298             [ACACTCCAAATCGTTGAAGCTAGCGATACTAATGTTTCGATTAAGAATTGTACTGCATTTTATACTTAAAAGCTGCCATGCGTATTGCTCTATGAGTGCTTGTGTGTATAGTAAAACATATAAAACATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAAAAAAAACATTCTTTCGCGCTATGTATTTATAAATTTCAAATCAACTCAAGCGGACATGTGCACAAATGTTCCTAATCATAAGAATAAAAAGATAAAAAAANAGACATGGGTCAANTACNNACGAGNNTAANGTANNGGCATAGGTATGATAGGTAGTTAAGTAAGCTGGCTGTATNAATCGAGAGCAAAAAACAGCACAACANNNANAACATAAGAAACCGATATCNTCAGCANNGATGTGTGGNNGCATCGTGTAGCACTCGTTGTCNNNGTAAATGTGAGGAAAATACCACAGAAACCTATNTGAACTCCNNACTGCTACTGCCCATANTACACTCTGTGCAATTCTACTGTTGTACATCACATCGGCGTCCTCTACC]


>consensus_7338#2 ACACTCCAAATCGTTGAAGCTAGCGATACTAATGTTTCGATTAAGAATTGTACTGCATTT TATACTTAAAAGCTGCCATGCGTATTGCTCTATGAGTGCTTGTGTGTATAGTAAAACATA TAAAACATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAAAAAAAACATTCTTTCG CGCTATGTATTTATAAATTTCAAATCAACTCAAGCGGACATGTGCACAAATGTTCCTAAT CATAAGAATAAAAAGATAAAAAAANAGACATGGGTCAANTACNNACGAGNNTAANGTANN GGCATAGGTATGATAGGTAGTTAAGTAAGCTGGCTGTATNAATCGAGAGCAAAAAACAGC ACAACANNNANAACATAAGAAACCGATATCNTCAGCANNGATGTGTGGNNGCATCGTGTA GCACTCGTTGTCNNNGTAAATGTGAGGAAAATACCACAGAAACCTATNTGAACTCCNNAC TGCTACTGCCCATANTACACTCTGTGCAATTCTACTGTTGTACATCACATCGGCGTCCTC TACC



consensusID : consensus_7338#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 469
fasta sequence
                              [AGATCCCCCGAGGTTATAAAGCATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAAAAAAAACATTCTTTCGCGCTATGTATTTATAAATTTCAAATCAACTCAGCGGACATGTGCACAATGTTCTTATCATAAGATAAAAAATAAAAAAAGACATGGTCAATACTTACGAGAATAATGTATTTGCATAGGTATGATAGGTAGTTTAAGTAAGCTTGCTGTATTAAATTGAGAGCAAAAGAACAAGCAACAACAAAGGAAAAACAATAAGAAACCGATATCCTTCAGCGGTGATGTGTGGTTAGCAATCGTGTTAGCATTCGTTGTCAATTGTAAAATGTGAGGAAAATAGAAACAGAAAACGTATCATGAAACTCCTTGACTGCTACTGGCGCGATAGTTAACACATCTGNTTGCAGATCTACTAGCTTGTCTTGTAGCTAGTCGACCATTCGGGCTGTACACA]

[+] EMBL AL695429             [AGATCCCCCGAGGTTATAAAGCATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAAAAAAAACATTCTTTCGCGCTATGTATTTATAAATTTCAAATCAACTCAGCGGACATGTGCACAATGTTCTTATCATAAGATAAAAAATAAAAAAAGACATGGTCAATACTTACGAGAATAATGTATTTGCATAGGTATGATAGGTAGTTTAAGTAAGCTTGCTGTATTAAATTGAGAGCAAAAGAACAAGCAACAACAAAGGAAAAACAATAAGAAACCGATATCCTTCAGCGGTGATGTGTGGTTAGCAATCGTGTTAGCATTCGTTGTCAATTGTAAAATGTGAGGAAAATAGAAACAGAAAACGTATCATGAAACTCCTTGACTGCTACTGGCGCGATAGTTAACACATCTGNTTGCAGATCTACTAGCTTGTCTTGTAGCTAGTCGACCATTCGGGCTGTACACA]


>consensus_7338#3 AGATCCCCCGAGGTTATAAAGCATCGTTGAAAGTGTGTAGCTCCAAGCAAAACAAACAAA AAAAAACATTCTTTCGCGCTATGTATTTATAAATTTCAAATCAACTCAGCGGACATGTGC ACAATGTTCTTATCATAAGATAAAAAATAAAAAAAGACATGGTCAATACTTACGAGAATA ATGTATTTGCATAGGTATGATAGGTAGTTTAAGTAAGCTTGCTGTATTAAATTGAGAGCA AAAGAACAAGCAACAACAAAGGAAAAACAATAAGAAACCGATATCCTTCAGCGGTGATGT GTGGTTAGCAATCGTGTTAGCATTCGTTGTCAATTGTAAAATGTGAGGAAAATAGAAACA GAAAACGTATCATGAAACTCCTTGACTGCTACTGGCGCGATAGTTAACACATCTGNTTGC AGATCTACTAGCTTGTCTTGTAGCTAGTCGACCATTCGGGCTGTACACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      CCGGTTAAATAATTCAAAGTTTTTTGGAACTGAGCAGATAATTTTGCGTGTGCTAATTAT 60
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      ATCGCTTCTTTTTTAGCTATATATCTTTGACTCTTATTGGAAACACGTGTTCTTTGTTGA 120
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      GAATGTCTGCTTCAGCGGATTCACTCCCAATTCTCATTCGCTTTCTTCGTTGGGGATGTA 180
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      TTGTTCATAATATTTTGGTTCTATGTCACGGTCGCCATGTACTATCCACCATTTGGTACA 240
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      TGATATGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGATATGTATTTT 300
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      GAAGTCAACTAAAGAGTGAGTGAGTGATGAGCTATCGAGCTGCTTATATACCGCATGGTT 360
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      GCTATGTATTACCATTGCATTTTCGTTATCCATTATCCCTGTGGTAACTGGGATCCAACA 420
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      GAATAGATTCAGGGTTCACAAATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAG 480
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      AACACTTAGCACTTCACTTAATATGTTTTACGCTTTTATTTGCTTAACGTTTGTGTCACA 540
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      ------------------------------------------------------------
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      TGAGGTATCGATTTGGTGATTCCAATTAGAACTTGGCTTCCTCGTTCGGCGGATCCCTAT 600
consensus_7338#1      ------------------------------------------------------------
                                                                                  

consensus_7338#2      -----------------------------------------------------------A 1
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      TAATACTGGATGGTTCCTACAGCGGCTTATCGTGCGCATAGAGATTCTCTTCTTCAAAAC 660
consensus_7338#1      -------------GGCAAGAATCGGCACGATNGGGAACTGAGCAGATAGTTTTGCGTGTG 47
                                                                                  

consensus_7338#2      CACTCCAAATCGTTGAAGC--TAGCGATAC-TAATGTTTCGATTAAGAATTGTACTGCAT 58
consensus_7338#3      ------------------------------------------------------------
consensus_7338#0      TACTCCAAATCGTTGAAGCG-TAGCGGTACATAATGTTTCGATTGAGAATTGTTCTGCAT 719
consensus_7338#1      CTCATTATATCGCTTCTTTTTTAGCTACATATCTTTGACTCTTATTGGAAACACGTGTTC 107
                                                                                  

consensus_7338#2      TTTATACTTAAAAGCTGCCATGCGTATTGCTCTATGAGTGCTTGTGTGTATAGTAAAACA 118
consensus_7338#3      ---------------------------------------------AGATCCCCCGAGGT- 14
consensus_7338#0      TTAAAACTTAAAAGCTGCGATGCGCGTTGCTCTTTGAGCGCTTGTGTGTATAGTAAAACA 779
consensus_7338#1      CTTGTTGAGAATGTCTTCTTCAGTGGATTCACTCCCAACTCTCATTCGCTTTCTTCGTT- 166
                                                                                  

consensus_7338#2      TATAAAACATCGTTGAAAGTGTGT-AGCTCCAAG-CAAAACAAACAAA-AAAAAACATTC 175
consensus_7338#3      TATAAAGCATCGTTGAAAGTGTGT-AGCTCCAAG-CAAAACAAACAAA-AAAAAACATTC 71
consensus_7338#0      TATAAAACATCGTTGAAAGTGTGT-AGCTCCAAG-CAAAACAAACAAACAAAAAACATTC 837
consensus_7338#1      GGGGATGTATTGTTCATAATATTTTGGCTCTATGTCACGGTCGCCATGTACTATCCACCA 226
                          *   ** *** * * * * *  **** * * **       **   *  *  **   

consensus_7338#2      TTTCGCGCTATGTATTTATAAATT--TCAAATCAACTCAAGCGGACATGTGCACAAATGT 233
consensus_7338#3      TTTCGCGCTATGTATTTATAAATT--TCAAATCAACTCA-GCGGACATGTGCACAA-TGT 127
consensus_7338#0      TTTCGCGCTATGTATTTATAAATT--TCAAATCAACTCA-GCGGACATGTGCACAA-TGT 893
consensus_7338#1      TTTGGTATATGATATGTCCGAACTACTCGGACTATTGCACACAGGTTCTAGTTTTAAGAT 286
                      *** *       *** *   ** *  **  *  *   **  * *      *    *   *

consensus_7338#2      TCCTAATCATAAGAATAAAAAGATAAAAAAANAGACATGGGTCAANTACNNACGAGNNTA 293
consensus_7338#3      TCTTA-TCATAAGA-TAAAAA---ATAAAAAAAGACATGGTC--AATACTTACGAGAATA 180
consensus_7338#0      TCTTA-TCATAAGATAAAAGA---TAAAAAAAAGACATGGTC--AATACTTACGAGAATA 947
consensus_7338#1      ATGTA-TTTTGAAGTCAACTAAAGAGTGAGTGAGTGATGGTT--GCTATGTATTACCATT 343
                         ** *  * *    **  *       *   **  ****      **   *  *   * 

consensus_7338#2      ANGTANNGGCATAGGTATGATAG--GTAGTT-AAGTAAGCTGGCTGTATNAA-TCGAGAG 349
consensus_7338#3      ATGTATTTGCATAGGTATGATAG--GTAGTTTAAGTAAGCTTGCTGTATTAAATTGAGAG 238
consensus_7338#0      ATGTATTTGCATAGGTATGATAG--GTAGTTTAAGTAAGCTTGCTGTATTAAATCGAGAG 1005
consensus_7338#1      GCATTTTCGT-TATCCATTATCCCTGTGGTAACTGGGATCCAACAGTATAGATTCAGGGT 402
                         *    *  **   ** **    ** **    *  * *   * ****  * *   *  

consensus_7338#2      CAAAA-----AACAGCACAACANNNANAACA-TAAGAAACCGATATCNT-CAGCANNGAT 402
consensus_7338#3      CAAAAGAACAAGCAACAACAAAGGAAAAACAATAAGAAACCGATATCCTTCAGCGGTGAT 298
consensus_7338#0      CAAAAGAACAAGCAACAACAAAGGAAAAACAATAAGAAACCGATATCCTTCAGCAGTGAT 1065
consensus_7338#1      TAACA----AATGGATATCATCGGCTAATCGAGAGAAACTCGGACTCAGAACACTTAGCA 458
                       ** *     *     *  *       * *   *  **  **   **      *   *  

consensus_7338#2      GTGTGGNNG--CATCGTGT-AGCACTCGTT-GTCNNN-GTAAA-TGT-----GAGGAA-- 449
consensus_7338#3      GTGTGGTTAGCAATCGTGTTAGCATTCGTT-GTCAATTGTAAAATGT-----GAGGAA-- 350
consensus_7338#0      GTGTGGTTAGCAATCGTGTTAGCACTCGTT-GTCAATTGTAAAATGT-----GAGGAA-- 1117
consensus_7338#1      CTTCACTTAATCATTTTGTACGCTTTGATTTGCTTAACGTACAGTGTCACATGAGGTATC 518
                       *          **  ***  **  *  ** *      *** * ***     **** *  

consensus_7338#2      AATACCA-CAGA---AACC----TATNTGAACTCCNNACTGCTACTGCC--CATANT--A 497
consensus_7338#3      AATAGAAACAGA---AAACGTATCATGAAACTCCTTGACTGCTACTGGCGCGATAGTTAA 407
consensus_7338#0      AATAGCAACAGA---AAACGTATCATGAAACTCCTTGACTGCTACTG-CGCGATAGTTAA 1173
consensus_7338#1      GATNTCGGCGATTCCAATTGGAACTTGGCTTCCTCGTACGGCGGATCCCGTAATNAANTA 578
                       **     *      **        *           ** **   *  *   **     *

consensus_7338#2      CAC-TCTG--TGCAA-----TTCTACTGTTGTACATCACATCGGCGTCCTCTACC----- 544
consensus_7338#3      CACATCTGNTTGCAG-----ATCTACTAGCTTGTCTTGTAGCTA-GTCGACCATTCGGGC 461
consensus_7338#0      CACATCTGT-TGCAG-----ATCTACTAGCTTGTCTTGTAGCTA-GTCGACCATTCGGGC 1226
consensus_7338#1      CTGAAATGG-TGTAGGAAGGCTGTAGGAGGCTTAATCGTGCGCATAGGAATTACTCTTCT 637
                      *     **  ** *       * **      *   *                *       

consensus_7338#2      ------------
consensus_7338#3      TGTACACA---- 469
consensus_7338#0      TGTACACA---- 1234
consensus_7338#1      NCAACAAACNTT 649
                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)