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Anopheles gambiae
cluster # 7442 cluster # 7442       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7442#0 length = 1255 sequences # 3  
consensus_7442#1 length = 924 sequences # 1  
consensus_7442#2 length = 922 sequences # 2  
consensus_7442#3 length = 708 sequences # 1  

consensusID : consensus_7442#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1255
fasta sequence
                              [CCGGCGACGCTGAGTGAATGATAGAACAAACCGATATCGAAACAACTTCTTCAGTATCGAACAAAAAGTGCAAAGTATAGTTAATGGAAGCGCGCGTGCGTTGAAAAACGATGCAAAACCACACAGAAACCCCGGTTGGATATAGTTAAGAAACAGAAAAATGCACACAAAGACTTTAGAGAAAAGCAGGATTTGATTAAAACATTTCTCATTCCCGTCACCCACAAATCAACGCCCTGATAGGCCGCCGTGATGATGCGTGAAAGATGCGTGCTGTGTGCCAAAATACATTCAATCTTTGCACAATTCACGAAGCTAAGTCCCACACAAGGTGCACACACAAGGGAGTCCACAATACGGCGCAACGGCCGCCCCCACCAGCTGTCCATTATAAAAGGAGCTCCTACATTTCCGGGCAATTACACATTAAACAAATGATAAACAGTGGCAGCACAGTCAAAGGTCCAGGATAAAGCAGGAATAACGTTGCGCGAATTGGGTACGGCTATTATAAAATGTGATTAAAACTAGATTGTAGAAGACCGTAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATCCCTGTCTATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGAATGCCCTACGTGTGCGTGCGGCTGAGAGTTTCCCAATTCCTATTAGTGTACACAAGGGAGTTTAGCGCATAGTTTAGCGAAAACCAACGAAAGCTACATTAGTTAACGAGTATCACTCAATTACAAACACACCCATACATACATACATTCGGCTAGCATTCATATTTGGAGTGTAGCGAAGATTTGCCGCCTTAACGAAGGCGTGCAAAGGTTGAGGGAGAAGAAAATTCCGCTGCAAACGTGTGCAAAGGGATTGATACTCAAGCAGCCGTTTTTTACAGTTCCTTATCCTTAGAAAAAACGAATCAAATCGCTCAACTCTCCTTCCCCCAGCATCAGCTGTTGTGTCGTCGTGCTCTGAAGAAGGGGGAAAAGCATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAACACACAGTATTAGGAAAACTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTCCACGATTAGTCAGTATTCCGTAGCAAACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGACTACAAACCAAGTAGCAAAAACAACATCGC]

[+] EMBL BM621406             [CCGGCGACGCTGAGTGAATGATAGAACAAACCGATATCGAAACAACTTCTTCAGTATCGAACAAAAAGTGCAAAGTATAGTTAATGGAAGCGCGCGTGCGTTGAAAAACGATGCAAAACCACACAGAAACCCCGGTTGGATATAGTTAAGAAACAGAAAAATGCACACAAAGACTTTAGAGAAAAGCAGGATTTGATTAAAACATTTCTCATTCCCGTCACCCACAAATCAACGCCCTGATAGGCCGCCGTGATGATGCGTGAAAGATGCGTGCTGTGTGCCAAAATACATTCAATCTTTGCACAATTCACGAAGCTAAGTCCCACACAAGGTGCACACACAAGGGAGTCCACAATACGGCGCAACGGCCGCCCCCACCAGCTGTCCATTATAAAAGGAGCTCCTACATTTCCGGGCAATTACACATTAAACAAATGATAAACAGTGGCAGCACAGTCAAAGGTCCAGGATAAAGCAGGAATAACGTTGCGCGAATTGGGTACGGCTATTATAAAATGTGATTAAAACTAGATTGTAGAAGACCGTAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATCCCTGTCTATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGTATGTCCTACGTGTGCGTGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM578943             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgAAAATGTGATTAAAACTAGATTGTAGAAGACCGTAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATCCCTGTCTATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGAATGCCCTACGTGTGCGTGCGGCTGAGAGTTTCCCAATTCCTATTAGTGTACACAAGGGAGTTTAGCGCATAGTTTAGCGAAAACCAACGAAAGCTACATTAGTTAACGAGTATCACTCAATTACAAACACACCCATACATACATACATTCGGCTAGCATTCATATTTGGAGTGTAGCGAAGATTTGCCGCCTTAACGAAGGCGTGCAAAGGTTGAGGGAGAAGAAAATTCCGCTGCAAACGTGTGCAAAGGGATTGATACTCAAGCAGCCGTTTTTTACAGTTCCTTATCCTTAGAAAAAACGAATCAAATCGCTCAACTCTCCTTCCCCCAGCATCAGCTGTTGTGTCGTCGTGCTCTGAAGAAGGGGGAAAAGCATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAACACACAGTATTAGGAAAACTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTCCACGATTAGTCAGTATTCCGTAGCAAACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTA                                           ]
[+] EMBL BM643787             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgGAATGCCCTACGTGTGCGTGCGGCTGAGAGTTTCCCAATTCCTATTAGTGTACACAAGGGAGTTTAGCGCATAGTTTAGCGAAAACCAACGAAAGCTACATTAGTTAACGAGTATCACTCAATTACAAACACACCCATACATACATACATTCGGCTAGCATTCATATTTGGAGTGTAGCGAAGATTTGCCGCCTTAACGAAGGCGTGCAAAGGTTGAGGGAGAAGAAAATTCCGCTGCAAACGTGTGCAAAGGGATTGATACTCAAGCAGCCGTTTTTTACAGTTCCTTATCCTTAGAAAAAACGAATCAAATCGCTCAACTCTCCTTCCCCCAGCATCAGCTGTTGTGTCGTCGTGCTCTGAAGAAGGGGGAAAAGCATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAACACACAGTATTAGGAAAACTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTCCACGATTAGTCAGTATTCCGTAGCAAACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGACTACAAACCAAGTAGCAAAAACAACATCGC]


>consensus_7442#0 CCGGCGACGCTGAGTGAATGATAGAACAAACCGATATCGAAACAACTTCTTCAGTATCGA ACAAAAAGTGCAAAGTATAGTTAATGGAAGCGCGCGTGCGTTGAAAAACGATGCAAAACC ACACAGAAACCCCGGTTGGATATAGTTAAGAAACAGAAAAATGCACACAAAGACTTTAGA GAAAAGCAGGATTTGATTAAAACATTTCTCATTCCCGTCACCCACAAATCAACGCCCTGA TAGGCCGCCGTGATGATGCGTGAAAGATGCGTGCTGTGTGCCAAAATACATTCAATCTTT GCACAATTCACGAAGCTAAGTCCCACACAAGGTGCACACACAAGGGAGTCCACAATACGG CGCAACGGCCGCCCCCACCAGCTGTCCATTATAAAAGGAGCTCCTACATTTCCGGGCAAT TACACATTAAACAAATGATAAACAGTGGCAGCACAGTCAAAGGTCCAGGATAAAGCAGGA ATAACGTTGCGCGAATTGGGTACGGCTATTATAAAATGTGATTAAAACTAGATTGTAGAA GACCGTAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATCC CTGTCTATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGAATGCCCTACGT GTGCGTGCGGCTGAGAGTTTCCCAATTCCTATTAGTGTACACAAGGGAGTTTAGCGCATA GTTTAGCGAAAACCAACGAAAGCTACATTAGTTAACGAGTATCACTCAATTACAAACACA CCCATACATACATACATTCGGCTAGCATTCATATTTGGAGTGTAGCGAAGATTTGCCGCC TTAACGAAGGCGTGCAAAGGTTGAGGGAGAAGAAAATTCCGCTGCAAACGTGTGCAAAGG GATTGATACTCAAGCAGCCGTTTTTTACAGTTCCTTATCCTTAGAAAAAACGAATCAAAT CGCTCAACTCTCCTTCCCCCAGCATCAGCTGTTGTGTCGTCGTGCTCTGAAGAAGGGGGA AAAGCATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAACACACAGTATTAGGA AAACTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTCCACGATTAGTCA GTATTCCGTAGCAAACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGA ACCGATTAATTAGGAGCGTACGCGACTACAAACCAAGTAGCAAAAACAACATCGC



consensusID : consensus_7442#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 924
fasta sequence
                              [GCAAGAATCGGCACGTAGGGAAGAAACGAATCAATCGCTCAACTCTCCTTCCCCCAGCATCAGCTGTTGTGTCGTCGTGCTCTGAAGAAGGGGGAAAAGCATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAACACACAGTATTAGGAAAAGTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTCCACGATTAGTCAGTATTCCGTAGCACACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGACTACAAACCAAGTAGCAAANAACAACATCGCATAAAAGCCAACACGTTCACAAGTAAACCTAGTAGAAATTTCAATCGTGTATATCTCGTTTGAGCTAAAGAATTGCGAACGCGCACCACTCGTTGCAGAACAAACAAAGCAANAAATTAGGAACAAGTTTGTGCATACCCGCACGAAAACAAACAACGCCGAGTCAGGAAGGAAGGAAGGAACGTGTAAAGTCGACGAGCGCCCCCCCGGCGTTGTGCTGAACCCAGGTAGTAAGTAAACAGGTAACAGAACTAGAGAGAGTGCAAGACATTGANACGCAGAGGGCACTAGGCTCAATGGTGCCACGGTATTACAAGCTACTACTACAAACTAACTACTAACTAACTACTACAAGGAACCAAAAACTGAACACACACATGGAAAAACGCCACAAACTTNGTGGAANCNATCTTNAAANGGGGGCCTTTGGGGGNAGAAACTCACACGAGNGTTTGGANTTTGGGANAAAGGAGCANGGCTTGTTNAGAGCNCAACAGCCAGAGACNGCCGTCAAGCNNTNTGTTTAGCCACCGCCCGTGGGCTGGGCAAGNGGAAACAGCAACCAGNGGGAAGAGCCCACAGGGGGGGAAAAG]

[+] EMBL BX468334             [GCAAGAATCGGCACGTAGGGAAGAAACGAATCAATCGCTCAACTCTCCTTCCCCCAGCATCAGCTGTTGTGTCGTCGTGCTCTGAAGAAGGGGGAAAAGCATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAACACACAGTATTAGGAAAAGTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTCCACGATTAGTCAGTATTCCGTAGCACACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGACTACAAACCAAGTAGCAAANAACAACATCGCATAAAAGCCAACACGTTCACAAGTAAACCTAGTAGAAATTTCAATCGTGTATATCTCGTTTGAGCTAAAGAATTGCGAACGCGCACCACTCGTTGCAGAACAAACAAAGCAANAAATTAGGAACAAGTTTGTGCATACCCGCACGAAAACAAACAACGCCGAGTCAGGAAGGAAGGAAGGAACGTGTAAAGTCGACGAGCGCCCCCCCGGCGTTGTGCTGAACCCAGGTAGTAAGTAAACAGGTAACAGAACTAGAGAGAGTGCAAGACATTGANACGCAGAGGGCACTAGGCTCAATGGTGCCACGGTATTACAAGCTACTACTACAAACTAACTACTAACTAACTACTACAAGGAACCAAAAACTGAACACACACATGGAAAAACGCCACAAACTTNGTGGAANCNATCTTNAAANGGGGGCCTTTGGGGGNAGAAACTCACACGAGNGTTTGGANTTTGGGANAAAGGAGCANGGCTTGTTNAGAGCNCAACAGCCAGAGACNGCCGTCAAGCNNTNTGTTTAGCCACCGCCCGTGGGCTGGGCAAGNGGAAACAGCAACCAGNGGGAAGAGCCCACAGGGGGGGAAAAG]


>consensus_7442#1 GCAAGAATCGGCACGTAGGGAAGAAACGAATCAATCGCTCAACTCTCCTTCCCCCAGCAT CAGCTGTTGTGTCGTCGTGCTCTGAAGAAGGGGGAAAAGCATTCCACATGGTGTACCCCA TTCCCGATTATGCAGTGGAACACACAGTATTAGGAAAAGTTTTACCACATACCATACCAT CATCATCGTTCCCCACGTTCTTCCACGATTAGTCAGTATTCCGTAGCACACAATACAACA ACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGA CTACAAACCAAGTAGCAAANAACAACATCGCATAAAAGCCAACACGTTCACAAGTAAACC TAGTAGAAATTTCAATCGTGTATATCTCGTTTGAGCTAAAGAATTGCGAACGCGCACCAC TCGTTGCAGAACAAACAAAGCAANAAATTAGGAACAAGTTTGTGCATACCCGCACGAAAA CAAACAACGCCGAGTCAGGAAGGAAGGAAGGAACGTGTAAAGTCGACGAGCGCCCCCCCG GCGTTGTGCTGAACCCAGGTAGTAAGTAAACAGGTAACAGAACTAGAGAGAGTGCAAGAC ATTGANACGCAGAGGGCACTAGGCTCAATGGTGCCACGGTATTACAAGCTACTACTACAA ACTAACTACTAACTAACTACTACAAGGAACCAAAAACTGAACACACACATGGAAAAACGC CACAAACTTNGTGGAANCNATCTTNAAANGGGGGCCTTTGGGGGNAGAAACTCACACGAG NGTTTGGANTTTGGGANAAAGGAGCANGGCTTGTTNAGAGCNCAACAGCCAGAGACNGCC GTCAAGCNNTNTGTTTAGCCACCGCCCGTGGGCTGGGCAAGNGGAAACAGCAACCAGNGG GAAGAGCCCACAGGGGGGGAAAAG



consensusID : consensus_7442#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 922
fasta sequence
                              [GTAAACCTAGTAGAAATTTCAATCGTGTATATCTCTTTTAGCTAAAGAATTGCGAACGCGCACCACTCGTTGCAGAACAAACAAACAAAAATTAGGAAAATTTTGCATACCCGCACAAAACAAACAACGCCGATAGGAAGGAAGGAAGGAACGTGTAAATCACACCCCCCCCGCGTTGTGCTGAACCCAGTAGTAAGTAAAGTAAAAACTAAAATCAAACATTAAGAGAGGGCACTAGCTCAATGGTGCCACGTATTACAACTACTACTACAA------ACTACTAACTACTACAAGAACAAAACTGAAAAAAGAAACCAAATTTAAATTAGGCTTGAAATAAATTATGAAAAATTAAAACAAACTACTTTCCCCTGTGAAGAAGACAGGAGCAAGGGAAGCACACGTGCCCGCAAGCATGGAATTATTGTTTGTTGTGCAGGTGTCCATGAATAATGAAAGGGGAAAAGGAACGAATGCTTTGAACAAAAACGTTGAGTAAAACAAACAAACAAGAATGATAGAAGAATGAAAAGGCCCGTTAAAGTAAGCGCCAACGAGCGATCAGTAACGATCTCCTACCAGACAAGAACAATCGTATTGCGGCCCGTGCCCCCCGCAGTGCTGCACAAGTGTGTGTGATGTATTTGTTGCCCTGGCATGATGTGAACATACATAGTTTTTAAGGATCCACTCCACTAAGGAAACTTCACACCGTAGCAGCGGGTCAGCAGCGTCCCGGAATGTTGTAAACGCATCTAAAAACGAAACGGATCATTTGATCGTGTTGATAAGTAGCAAAACAAACAACAACAAAAACTGTATGCGCACAGGCAGAACCGGCAGATGATCAATGATTAATAGAAACGAAGTGGATAATAGAAAGTTATTCGATTAGACTTGCGATTTANATGGACTGTTGTGGCCG]

[+] EMBL BX625655             [GTAAACCTAGTAGAAATTTCAATCGTGTATATCTCTTTTAGCTAAAGAATTGCGAACGCGCACCACTCGTTGCAGAACAAACAAACAAAAATTAGGAAAATTTTGCATACCCGCACAAAACAAACAACGCCGATAGGAAGGAAGGAAGGAACGTGTAAATCACACCCCCCCCGCGTTGTGCTGAACCCAGTAGTAAGTAAAGTAAAAACTAAAATCAAACATTAAGAGAGGGCACTAGCTCAATGGTGCCACGTATTACAACTACTACTACAA      ACTACTAACTACTACAAGAACAAAACTGAAAAAAGAAACCAAATTTAAATTAGGCTTGAAATAAATTATGAAAAATTAAAACAAACTACTTTCCCCTGTGAAGAAGACAGGAGCAAGGGAAGCACACGTGCCCGCAAGCATGGAATTATTGTTTGTTGTGCAGGTGTCCATGAATAATGAAAGGGGAAAAGGAACGAATGCTTTGAACAAAAACGTTGAGTAAAACAAACAAACAAGAATGATAGAAGAATGAAAAGGCCCGTTAAAGTAAGCGCCAACGAGCGATCAGTAACGATCTCCTACCAGACAAGAACAATCGTATTGCGGCCCGTGCCCCCCGCAGTGCTGCACAAGTGTGTGTGATGTATTTGTTGCCCTGGCATGATGTGAACATACATAGTTTTTAAGGATCCACTCCACTAAG                                                                                                                                                                                                                                 ]
[+] EMBL BX623880             [                                                                                                                                                                                                                                                        CCACGTATTACAACTACTACTACAAACTACTACTACTAACTACTACAAGAACAAAACTGAAAAAAGAAACCAAATTTAAATTAGGCTTGAAATAAATTATGAAAAATTAAAACAAACTACTTTCCCCTGTGAAGAAGACAGGAGCAAGGGAAGCACACGTGCCCGCAAGCATGGAATTATTGTTTGTTGTGCAGGTGTCCATGAATAATGAAAGGGGAAAAGGAACGAATGCTTTGAACAAAAACGTTGAGTAAAACAAACAAACAAGAATGATAGAAGAATGAAAAGGCCCGTTAAAGTAAGCGCCAACGAGCGATCAGTAACGATCTCCTACCAGACAAGAACAATCGTATTGCGGCCCGTGCCCCCCGCAGTGCTGCACAAGTGTGTGTGATGTATTTGTTGCCCTGGCATGATGTGAACATACATAGTTTTTAAGGATCCACTCCACTAAGGAAACTTCACACCGTAGCAGCGGGTCAGCAGCGTCCCGGAATGTTGTAAACGCATCTAAAAACGAAACGGATCATTTGATCGTGTTGATAAGTAGCAAAACAAACAACAACAAAAACTGTATGCGCACAGGCAGAACCGGCAGATGATCAATGATTAATAGAAACGAAGTGGATAATAGAAAGTTATTCGATTAGACTTGCGATTTANATGGACTGTTGTGGCCG]


>consensus_7442#2 GTAAACCTAGTAGAAATTTCAATCGTGTATATCTCTTTTAGCTAAAGAATTGCGAACGCG CACCACTCGTTGCAGAACAAACAAACAAAAATTAGGAAAATTTTGCATACCCGCACAAAA CAAACAACGCCGATAGGAAGGAAGGAAGGAACGTGTAAATCACACCCCCCCCGCGTTGTG CTGAACCCAGTAGTAAGTAAAGTAAAAACTAAAATCAAACATTAAGAGAGGGCACTAGCT CAATGGTGCCACGTATTACAACTACTACTACAAACTACTAACTACTACAAGAACAAAACT GAAAAAAGAAACCAAATTTAAATTAGGCTTGAAATAAATTATGAAAAATTAAAACAAACT ACTTTCCCCTGTGAAGAAGACAGGAGCAAGGGAAGCACACGTGCCCGCAAGCATGGAATT ATTGTTTGTTGTGCAGGTGTCCATGAATAATGAAAGGGGAAAAGGAACGAATGCTTTGAA CAAAAACGTTGAGTAAAACAAACAAACAAGAATGATAGAAGAATGAAAAGGCCCGTTAAA GTAAGCGCCAACGAGCGATCAGTAACGATCTCCTACCAGACAAGAACAATCGTATTGCGG CCCGTGCCCCCCGCAGTGCTGCACAAGTGTGTGTGATGTATTTGTTGCCCTGGCATGATG TGAACATACATAGTTTTTAAGGATCCACTCCACTAAGGAAACTTCACACCGTAGCAGCGG GTCAGCAGCGTCCCGGAATGTTGTAAACGCATCTAAAAACGAAACGGATCATTTGATCGT GTTGATAAGTAGCAAAACAAACAACAACAAAAACTGTATGCGCACAGGCAGAACCGGCAG ATGATCAATGATTAATAGAAACGAAGTGGATAATAGAAAGTTATTCGATTAGACTTGCGA TTTANATGGACTGTTGTGGCCG



consensusID : consensus_7442#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 708
fasta sequence
                              [TAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATCCCTGTCTATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGAATGCCCTACGTGTGCGTGCGGCTGAGAGTTTCCCAATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAACACAGTATTAGGAAAACTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTCCACGATTAGTCAGTATTCCGTAGCACACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGACTACAAACCAAGTAGCAAAAACAACATCGCATAAAAGCCAACACGTTCACAAGTAAACCTAGTACGTAGCAGCGGGTTAGCAGCGTCCCGGAATGTTGTAAACGCATCTAAAAACGAACGGATCATTTGATCGTGTTGATAAGTAGCAAAACAAACAACAACAAAAACTGTATGCGCACAGGCAGAACCGGCAGATGATCAATGATTAATAGAAACGAAGTGGATAATAGAAAGTTATTCGATTAGACTAGCGATTTAGATGGACTGTTGTGGCCGACGCCATACCTGAAATGCACAAAAACAAACAAACTGAAAATTTAGCCGCCAGAAGTACGCACCGGAAAAGCACGCGTGGACGCACGCACGCACGC]

[+] EMBL BX610452             [TAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATCCCTGTCTATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGAATGCCCTACGTGTGCGTGCGGCTGAGAGTTTCCCAATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAACACAGTATTAGGAAAACTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTCCACGATTAGTCAGTATTCCGTAGCACACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGACTACAAACCAAGTAGCAAAAACAACATCGCATAAAAGCCAACACGTTCACAAGTAAACCTAGTACGTAGCAGCGGGTTAGCAGCGTCCCGGAATGTTGTAAACGCATCTAAAAACGAACGGATCATTTGATCGTGTTGATAAGTAGCAAAACAAACAACAACAAAAACTGTATGCGCACAGGCAGAACCGGCAGATGATCAATGATTAATAGAAACGAAGTGGATAATAGAAAGTTATTCGATTAGACTAGCGATTTAGATGGACTGTTGTGGCCGACGCCATACCTGAAATGCACAAAAACAAACAAACTGAAAATTTAGCCGCCAGAAGTACGCACCGGAAAAGCACGCGTGGACGCACGCACGCACGC]


>consensus_7442#3 TAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATCCCTGTC TATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGAATGCCCTACGTGTGCG TGCGGCTGAGAGTTTCCCAATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGAAC ACAGTATTAGGAAAACTTTTACCACATACCATACCATCATCATCGTTCCCCACGTTCTTC CACGATTAGTCAGTATTCCGTAGCACACAATACAACAACAGCACGCAACGTCCCGGAAGA ACATAAAATCGAACCGATTAATTAGGAGCGTACGCGACTACAAACCAAGTAGCAAAAACA ACATCGCATAAAAGCCAACACGTTCACAAGTAAACCTAGTACGTAGCAGCGGGTTAGCAG CGTCCCGGAATGTTGTAAACGCATCTAAAAACGAACGGATCATTTGATCGTGTTGATAAG TAGCAAAACAAACAACAACAAAAACTGTATGCGCACAGGCAGAACCGGCAGATGATCAAT GATTAATAGAAACGAAGTGGATAATAGAAAGTTATTCGATTAGACTAGCGATTTAGATGG ACTGTTGTGGCCGACGCCATACCTGAAATGCACAAAAACAAACAAACTGAAAATTTAGCC GCCAGAAGTACGCACCGGAAAAGCACGCGTGGACGCACGCACGCACGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7442#0      CCGGCGACGCTGAGTGAATGATAGAACAAACCGATATCGAAACAACTTCTTCAGTATCGA 60
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      ------------------------------------------------------------
consensus_7442#2      ------------------------------------------------------------
                                                                                  

consensus_7442#0      ACAAAAAGTGCAAAGTATAGTTAATGGAAGCGCGCGTGCGTTGAAAAACGATGCAAAACC 120
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      ------------------------------------------------------------
consensus_7442#2      ------------------------------------------------------------
                                                                                  

consensus_7442#0      ACACAGAAACCCCGGTTGGATATAGTTAAGAAACAGAAAAATGCACACAAAGACTTTAGA 180
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      ------------------------------------------------------------
consensus_7442#2      ------------------------------------------------------------
                                                                                  

consensus_7442#0      GAAAAGCAGGATTTGATTAAAACATTTCTCATTCCCGTCACCCACAAATCAACGCCCTGA 240
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      ------------------GCAAGAATCGGCACGTAGGGAAGAAACGAATCAAT-CGCTCA 41
consensus_7442#2      ----------------------------GTAAACCTAGTAGAAATT--TCAAT-CGTGTA 29
                                                                                  

consensus_7442#0      TAGGCCGCCGTGATGATGCGTGAAAGATGCG-TGCTGTGTGCCAAAATACATTCAATCTT 299
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      ACTCTCCTTCCCCCAGC-ATCAGCTGTTGTGTCGTCGTGCTCTGAAGAAGGGGGAAAAGC 100
consensus_7442#2      TATCTCTTTTAGCTAAAGAATTGCGAACGCG-CACCACTCGTTGCAGAACAAACAAACAA 88
                                                                                  

consensus_7442#0      TGCACAATTCACGAAGCTAAGTCCCACACAAGGTGCACACACAAGGGAGTCCACAATACG 359
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      ATTCCACATGGTGTACCCCATTCCCGATTATGCAGTGGA-ACACACAGTATTAGGAAAAG 159
consensus_7442#2      AAATTA-GGAAAATTTTGCATACCCGCACAAAACAAACA-ACGC-CGATAGGAAGGAAGG 145
                                                                                  

consensus_7442#0      GCGCAACGGCCGCCCCCACCAGCTGTCCATTATAAAAGGAGCTCCTACATTTCCGGGCAA 419
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      TTTTACCACATACCATACCATCATCATCGTTCCCCACG-TTCTTCCACGATTAGTCAGTA 218
consensus_7442#2      AAGGAACGTGTAA-ATCACACCCCCCCCGCGTTGTGC--TGAACCCAGTAGTAAGTAAAG 202
                                                                                  

consensus_7442#0      TTACACATTAAACAAATGATAAACAGTGGCAGCACAGTCAAAGGTCCAGGATAAAGCAGG 479
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      TTCCGTAGCACACAATACAACAACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACC 278
consensus_7442#2      TAAAAACTAAAATCAAACATTAAGAGAGGGCACTAGCTCAATGGTGCCACGTATTACAAC 262
                                                                                  

consensus_7442#0      AATAACGTTGCGCGAATTGGGTACGGCTATTATAAAATGTGATTAAAACTAGATTGTAGA 539
consensus_7442#3      ------------------------------------------------------------
consensus_7442#1      GATTAA----TTAGGAGCGTACGCGACTACAAACCAAGTAGCAAANAACAACATC----- 329
consensus_7442#2      TACTAC----TACAAACTACTAACTACTACAAGAACAAAACTGAAAAAAGAAACC----- 313
                                                                                  

consensus_7442#0      AGACCGTAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATC 599
consensus_7442#3      ------TAGAGAGCAGGCCCCCGCACACACCACCTGTGTGTTGACAACAGAACTCAAATC 54
consensus_7442#1      GCATAAAAGCCAACACGTTCACAAGTAAACCTAGTAGAAATTTCAATCGTGTATATCTCG 389
consensus_7442#2      AAATTTAAATTAG---GCTTG-AAATAAATT--ATGAAAAATTAAAACAAACTACTTTCC 367
                             *   *    *         * *     *      *   * *            

consensus_7442#0      CCTGTCTATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGAATGCCCTACG 659
consensus_7442#3      CCTGTCTATTTTCTCTAATAGAATCATACCTGTTCCCTCCCCAAGTGTGAATGCCCTACG 114
consensus_7442#1      TTTGAG-CTAAAGAATTGCGAACGCGCACCACTCGTTGCAGAACAAACAAAGCAANAA-- 446
consensus_7442#2      CCTGTG-AAGAAGACAGGAGCAAGGGAAGCACACGTGCCCGCAAGCATGGAATTATTGTT 426
                        **                 *     * *        *   *       *         

consensus_7442#0      TGTGCGTGCGGCTGAGAGTTTCCCAATTCCTATTAGTGTACACAAGGGAGTTTAGCGCAT 719
consensus_7442#3      TGTGCGTGCGGCTGAGAGTTTCCCAATTCCACATGGTGTACCCCA------TTCCCG-AT 167
consensus_7442#1      -AT-TAGGAAC----AAGTTTGTGCATACCCGCACGAAAACAAAC--------AACGCCG 492
consensus_7442#2      TGT-TGTGCAG----GTGTCCATGAATAAT-GAAAGGGGAAAAGG--------AACGAAT 472
                        *    *         **      **        *   *               **   

consensus_7442#0      AGTTTAGCGAAAACCAACGAAAGCTACATTAGTTAACGAGTATCACTCAATTAC-AAACA 778
consensus_7442#3      TATGCAGTGGAACACAGTATTAGGAAAACTT-TTACCACATACCATACCATCAT-CATCG 225
consensus_7442#1      AGTCAGGAAGGAAGGAAGG--AACGTGTAAAGTCGACGAGCGCCCCCCCGGCGTTGTGCT 550
consensus_7442#2      GCTTTGAACAAAAACGTTG--AGTAAAACAAACAAACAAGAATGATAGAAGAAT-GAAAA 529
                        *        *         *              *                       

consensus_7442#0      CACCC------ATACATACATACATTCGGCTAGCATTC-ATATT-TGGAGTGTAGCGAAG 830
consensus_7442#3      TTCCCC-----ACGTTCTTCCACGATTAGTCAGTATTCCGTAGCACACAATACAACAACA 280
consensus_7442#1      GAACCCAGGTAGTAAGTA--AACAGGTAACAGAACTAG-AGAGAGTGCAAGACATTGANA 607
consensus_7442#2      GGCCCGTTAAAGTAAGCGCCAACGAGCGATCAGTAACG-ATCTCCTACCAGACAAGAACA 588
                         **                **                              *   *  

consensus_7442#0      A-TTTGCCGCCTTAACGAAGGCGTGCAAAG-------GTTGAGGGAGAAGAAAATTCCGC 882
consensus_7442#3      G-CACGCAACGTCC-CGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGAC 338
consensus_7442#1      --CGCA--GAGGGCACTAGGCTCAATGGTGCCACGGTATTACAAGC--TACTACTACAAA 661
consensus_7442#2      ATCGTATTGCGGCCCGTGCCCCCCGCAGTGCTGCACAAGTGTGTGTGATGTATTTGTTGC 648
                                                             *                    

consensus_7442#0      TGCAA-AC-GTGT-GCAAAGGGATTGATACTCAAGCAGCCGTTT-TTTACAGTT---CCT 935
consensus_7442#3      TACAA-ACCAAGTAGCAAAAACAACATCGCATAAAAGCCAACACGTTCACAAGTAAACCT 397
consensus_7442#1      CTAACTACTAACTAACTACTACAAGGAA-CCAAAAACTGAACACACACATGGAAAAACGC 720
consensus_7442#2      CCTGGCATGATGTGAACA-TACATAGTT-TTTAAGGATCCACTC-CAC-TAAGGAAACTT 704
                            *     *    *    *         **                       *  

consensus_7442#0      TAT-CCTTAGAAAAAACGAATCAAATCGCTCAACTCTCCTTCCCCCAGC-ATCAGCTG-T 992
consensus_7442#3      AGT-ACGTAGCAGCGGGTTAGCAGCGTCCCGGAATGTTGTAAACGCATCTAAAAACGA-A 455
consensus_7442#1      CACAAACTTNGTGGAANCNATCTTNAAANGGGGGCCTT-TGGGGGNA---GAAACTCACA 776
consensus_7442#2      CACACCGTAGCAGCGGGTCAGCAGCGTCCCGGAATGTTGTAAACGCATCTAAAAACGAAA 764
                             *           * *              *  *      *      *      

consensus_7442#0      TGTGTCGTCGTGCTCTGAAGA-AGGGGGAAAAGCATTCCACATGGTGTACCCCATTCCCG 1051
consensus_7442#3      CGGATCATTTGATCGTGTTGATAAGTAGCAAAACAAACAACAACAAAAACTGTATGC--- 512
consensus_7442#1      CGAGNGTTTGGANTTTGGGANAAAGGAGCANGGCTTGT-----TNAGAGCNCAACAG--- 828
consensus_7442#2      CGGATCATTTGATCGTGTTGATAAGTAGCAAAACAAACAACAACAAAAACTGTATGC--- 821
                       *     *       **     * *  * *   *               *   *      

consensus_7442#0      ATTATGCAGTGGAACACACAGTATTAGGAAAAC--TTTTACCACATACCATACCATCATC 1109
consensus_7442#3      -----GCACAGGCAGAACCGGCAGATGATCAAT--GATTAATAGAAACGAAGTGGATAAT 565
consensus_7442#1      -----CCAGAGACNG--CCGTCAAGCNNTNTGTTTAGCCACCGCCCGTGGGCTGGGCAAG 881
consensus_7442#2      -----GCACAGGCAGAACCGGCAGATGATCAAT--GATTAATAGAAACGAAGTGGATAAT 874
                            **  *       *   *                *                 *  

consensus_7442#0      ATC--GTTCCCCACGTTCTTCCACGA-TT-AGTCAGTATTCCGTAGCAAACAATACAACA 1165
consensus_7442#3      AGAAAGTTATTCGATTAGACTAGCGA-TTTAGATGGACTGTTGTGGCCGACGCCATACCT 624
consensus_7442#1      NGGAAACAG--CAACCAGNGGGAAGAGCCCACAGGGGGGGAAAAG--------------- 924
consensus_7442#2      AGAAAGTTATTCGATTAGACTTGCGA-TTTANATGGACTGTTGTGGCCG----------- 922
                                 *            **    *    *                        

consensus_7442#0      ACAGCACGCAACGTCCCGGAAGAACATAAAATCGAACCGATTAATTAGGAGCGTACGCGA 1225
consensus_7442#3      GAAATGCACAAAAAC--AAACAAACTGAAAATTTAGCCG-----CCAGAAGTACGCACCG 677
consensus_7442#1      ------------------------------------------------------------
consensus_7442#2      ------------------------------------------------------------
                                                                                  

consensus_7442#0      CTACAAACCAAGTAG-CAAAAACAACATCGC 1255
consensus_7442#3      GAAAAGCACGCGTGGACGCACGCACGCACGC 708
consensus_7442#1      -------------------------------
consensus_7442#2      -------------------------------
                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)